Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq1 149 8e-31
seq30 93.3 5e-14
>seq1
Length=1362551
Score = 149 bits (164), Expect = 8e-31
Identities = 211/297 (71%), Gaps = 0/297 (0%)
Strand=Plus/Plus
Query 168581 AGGTGTTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTAC 168640
||| || ||| ||||| | | ||||||||||||||||| |||||| ||| || ||
Sbjct 1128412 AGGCGTCAAAATTTGGGATGGTAATGGTTCTCGTGAATACCTAGATTCTCTTGGGTTAAC 1128471
Query 168641 CGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGC 168700
|| ||| ||||||||||||||||||| ||||||| || |||||||||||| || ||
Sbjct 1128472 TGACAGAGAAGAAGGTGATTTAGGTCCTGTTTATGGTTTCCAATGGAGACATTTTGGTGC 1128531
Query 168701 TCAATATATTGACTGTGATACAGATTACACCGGACAAGGAGTAGACCAATTAAGTCAAAC 168760
| ||||| |||| ||| | || || ||||| ||||| || |||||||| | |
Sbjct 1128532 TGAATATGTTGATTGTCACACTGACTACACAAACAAAGGATACGATCAATTAAGCGATAT 1128591
Query 168761 TATAAATACTTTACACAACAATCCGGAAAATAGAAGAATATTAATTAATAGTTGGGATGT 168820
|| ||| || | | |||||| | |||||||||| | || | |||| ||
Sbjct 1128592 AATTCATAAGTTGAAGACCAATCCTTACGATAGAAGAATCATCATGTCTGCTTGGAATCC 1128651
Query 168821 ACCACAACTTGATAAAATGGTTCTTCCCCCTTGTCACACTTTAGTGCAATTTTATGT 168877
|||| | || | ||||||| |||||| || || ||| ||| ||||| |||||
Sbjct 1128652 ACCAGACTTTAAGAAAATGGCTCTTCCGCCATGCCACGTTTTCTGTCAATTCTATGT 1128708
Score = 96.9 bits (106), Expect = 4e-15
Identities = 166/235 (71%), Gaps = 11/235 (5%)
Strand=Plus/Plus
Query 51830 AACACTTG-AAGTTGGAGACTTGGTTAAAAGACA-ATTGATGGATGGTGATGATGTACTA 51887
|||| ||| || |||| || | ||| ||||||| || || | |||||||| ||| ||
Sbjct 1220533 AACAATTGCAAATTGGGGATATTGTTGAAAGACATATAGAAG-ATGGTGATATTGTTTTA 1220591
Query 51888 TTAAATAGGCAACCAACACTTCATAAAGCTTCTATGCAAAGTTTTAAAGTTAAAATTCAA 51947
|| ||||| ||||| | | |||| | ||||| | | | | ||||||| |
Sbjct 1220592 TTTAATAGACAACCTTCTTTGCATAGACTATCTATCTTATCCCATTATGCTAAAATTAGA 1220651
Query 51948 CCAGTAAAAACATTTA----AAATGAATTTGGCTATGACTAAAGCATATAATGCTGATTT 52003
|| | |||||| | ||| |||| || | || || | ||||||| ||||||||
Sbjct 1220652 CCTTGGAGAACATTCAGATTAAACGAATGTG--TTTG--TACACCATATAACGCTGATTT 1220707
Query 52004 TGATGGGGATGAAATGAATTTACATGTTCCTCAATCATATGGAGCTACTGCTGAA 52058
|||||| ||||||||||||||||||||||| ||| | | | ||||| ||||||
Sbjct 1220708 TGATGGTGATGAAATGAATTTACATGTTCCACAAACTGAAGAAGCTAGAGCTGAA 1220762
Score = 93.3 bits (102), Expect = 5e-14
Identities = 185/268 (69%), Gaps = 7/268 (3%)
Strand=Plus/Minus
Query 192852 CAATCTGCTCGAAACTGTTTTTATACTTCTATGGTTAAACAAGCCATTGGATTTATTCCG 192911
|||||| || |||| || | | || |||||| ||| |||||||| || || | |
Sbjct 919826 CAATCTCCTAGAAATACTTATCAATCTGCTATGGGTAAGCAAGCCATGGGTGTTTTCTTG 919767
Query 192912 TGTCAC---AACTTAAAAACGGAAACAGTATCTCATACATTAAATTATCCACAAAAACCC 192968
| || ||||| | || ||| || | || ||| || | || |||||||| ||
Sbjct 919766 ACTAACTATAACTTTAGAATGGATACCATGGCTAATATTTTGTACTACCCACAAAAGCCT 919707
Query 192969 CTTGTTACCAC-AGAT-ATTGCAAAATTTAATAAATTAGACGATTATCCAAATGGTATTA 193026
| | ||| || ||| | || || |||| | || | ||| |||| || |||| |
Sbjct 919706 TTAGGTACTACCAGAGCAATGGAACATTTGA-AATTCAGA-GATTTACCTGCTGGTCAGA 919649
Query 193027 ATGCTATTGTTGCTATAGCTTGCTATACTGGTTATAATCAAGAAGACAGTATTATTTTAA 193086
|||||||||| ||||| || || ||| |||| |||||||||||||| || ||| | |
Sbjct 919648 ATGCTATTGTAGCTATTGCATGTTATTCTGGATATAATCAAGAAGATTCCATGATTATGA 919589
Query 193087 ATAAAGCTTCTATTGAAAGAGGATTATT 193114
|| || | |||||||| ||||| |||||
Sbjct 919588 ATCAATCATCTATTGATAGAGGTTTATT 919561
>seq30
Length=396840
Score = 93.3 bits (102), Expect = 5e-14
Identities = 159/225 (71%), Gaps = 8/225 (4%)
Strand=Plus/Minus
Query 193827 AAACATATGGTTAAGGATAAAATGCATGCTAG---AAGTCATGGACAAGTGACTACTTTA 193883
|||||||||||| |||||| |||||||| || ||| | | |||| | || |||
Sbjct 329711 AAACATATGGTTTTGGATAAGATGCATGCAAGAGCAAG--AGGTCCAAGAG-CTGTCTTA 329655
Query 193884 CATCGACAACCAAATTGTGGTCGTTCTCAAGGTGGAGGTTTAAGATTTGGAGAAATGGAG 193943
| ||||||| | ||| | ||| || ||| ||||| ||||| || ||||||||
Sbjct 329654 ACTAGACAACCTACGGAAGGTAGATCTAGAGATGGTGGTTTGAGATTAGGTGAAATGGAA 329595
Query 193944 AAAGACTGTATTTTAGTTCATGGTGCTACTCAATT-CTTGAATGAAAGAATGTTTTTGTA 194002
| ||| ||| || | | | |||||||| ||||||| ||| | |||||| || | | |
Sbjct 329594 AGAGATTGTGTTATTGCTTATGGTGCTTCTCAATTACTTTTA-GAAAGATTGATGATTTC 329536
Query 194003 TTCTGATCCTTTTCAAGTCGATGTTTGCACAGAATGTGGTATGAT 194047
|||||| | ||| |||| ||| ||| | |||||||| ||||
Sbjct 329535 ATCTGATGCCTTTGAAGTTGATACTTGTAACAAATGTGGTTTGAT 329491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635177274471480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |