Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq1 102 1e-16 >seq1 Length=1362551 Score = 102 bits (112), Expect = 1e-16 Identities = 203/298 (68%), Gaps = 2/298 (1%) Strand=Plus/Plus Query 180482 GGTGTTAAAGTGTGGAATGATAATGGTTCGCGTAAGTTTTTAGATTCTTGTGGATTTCAT 180541 || || ||| | ||| ||| ||||||||| ||| | | |||||||| ||| || | Sbjct 1128413 GGCGTCAAAATTTGGGATGGTAATGGTTCTCGTGAATACCTAGATTCTCTTGGGTTAACT 1128472 Query 180542 TTTCGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCT 180601 || |||||||||||||||| || ||||||| || |||||||||||| || ||| Sbjct 1128473 GACAGAGAAGAAGGTGATTTAGGTCCTGTTTATGGTTTCCAATGGAGACATTTTGGTGCT 1128532 Query 180602 CAATATATTGACTGTGATACCAACTATATCGGGCAAGGTATA-GACCAATTAAGCCAAGT 180660 ||||| |||| ||| | || |||| | | ||| | ||| || ||||||||| | | Sbjct 1128533 GAATATGTTGATTGTCACACTGACTACA-CAAACAAAGGATACGATCAATTAAGCGATAT 1128591 Query 180661 TATAGAAACTATAAAAAATAATCCCGAATGCCGAAGAATAATCATAGATAGTTGGAATGT 180720 || | | | || | ||||| | ||||||| ||||| | ||||||| Sbjct 1128592 AATTCATAAGTTGAAGACCAATCCTTACGATAGAAGAATCATCATGTCTGCTTGGAATCC 1128651 Query 180721 ATCACAATTACCAGATATGGCTCTTCCACCATGTCACTGTTTGGTACAATTTTATGTT 180778 | || | || | ||||||||||| ||||| ||| ||| ||||| |||||| Sbjct 1128652 ACCAGACTTTAAGAAAATGGCTCTTCCGCCATGCCACGTTTTCTGTCAATTCTATGTT 1128709 Score = 95.1 bits (104), Expect = 2e-14 Identities = 75/90 (83%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 201153 AATGCAATTGTAGCAATTGCATGTTACACTGGATACAATCAAGAAGATAGTGTTATTCTT 201212 ||||| |||||||| ||||||||||| ||||||| |||||||||||| | ||| | Sbjct 919649 AATGCTATTGTAGCTATTGCATGTTATTCTGGATATAATCAAGAAGATTCCATGATTATG 919590 Query 201213 AATAAAGCATCTATTGAAAGAGGTTTATTC 201242 ||| || |||||||||| |||||||||||| Sbjct 919589 AATCAATCATCTATTGATAGAGGTTTATTC 919560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655279664169000