Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq1 154 2e-32 >seq1 Length=1362551 Score = 154 bits (170), Expect = 2e-32 Identities = 275/402 (68%), Gaps = 12/402 (3%) Strand=Plus/Plus Query 171666 AGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTAC 171725 ||| || ||| ||||| ||| ||||||||||||||||| |||||| ||||| || Sbjct 1128412 AGGCGTCAAAATTTGGGATGGTAATGGTTCTCGTGAATACCTAGATTCTCTTGGGTTAAC 1128471 Query 171726 TGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGC 171785 ||| ||| ||||||||||||||||||| ||||||| || |||||||||||| || || Sbjct 1128472 TGACAGAGAAGAAGGTGATTTAGGTCCTGTTTATGGTTTCCAATGGAGACATTTTGGTGC 1128531 Query 171786 TCAATATATCGACTGTTATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAAC 171845 | ||||| | || ||| | || || |||||| ||||| || |||||||| | | Sbjct 1128532 TGAATATGTTGATTGTCACACTGACTACACAAACAAAGGATACGATCAATTAAGCGATAT 1128591 Query 171846 TATTAATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGAATGT 171905 ||| ||| || | | ||| || | |||||| || | || | ||||||| Sbjct 1128592 AATTCATAAGTTGAAGACCAATCCTTACGATAGAAGAATCATCATGTCTGCTTGGAATCC 1128651 Query 171906 ACCTCAACTTGATAAAATGGTTCTTCCTCCTTGCCACACTTTAGCACAATTTTATGT--- 171962 ||| | || | ||||||| |||||| || |||||| ||| ||||| ||||| Sbjct 1128652 ACCAGACTTTAAGAAAATGGCTCTTCCGCCATGCCACGTTTTCTGTCAATTCTATGTTTC 1128711 Query 171963 ----CAGaaaaaaaTCAATCTTAGATTGTCA-----GTTATATCAAAGATCAGCTGATTT 172013 | ||| | || | | ||||||| ||||| |||||||| |||| | Sbjct 1128712 TTTCCCTAAAGACCAAAAGCCTCAATTGTCATGTATCTTATACCAAAGATCTTGTGATAT 1128771 Query 172014 AGGATTGGGGGTACCTTATAATATTGGATTTTATTCATTTTT 172055 || ||||| || |||| || |||| | |||| | || || Sbjct 1128772 GGGGTTGGGTGTTCCTTTCAACATTGCTTCTTATGCTTTGTT 1128813 Score = 96.9 bits (106), Expect = 4e-15 Identities = 187/269 (70%), Gaps = 9/269 (3%) Strand=Plus/Minus Query 192405 CAATCTGCTCGAAACTGTTTTTATACTTCTATGGTTAAACAAGCCATTGGGTTTATTC-- 192462 |||||| || |||| || | | || |||||| ||| |||||||| |||| | ||| Sbjct 919826 CAATCTCCTAGAAATACTTATCAATCTGCTATGGGTAAGCAAGCCAT-GGGTGTTTTCTT 919768 Query 192463 --CTTGCCACAACTTAAAAACGGAAACAGTCTCTCATACATTAAATTATCCACAAAAACC 192520 || | | ||||| | || ||| || | || ||| || | || |||||||| || Sbjct 919767 GACTAACTATAACTTTAGAATGGATACCATGGCTAATATTTTGTACTACCCACAAAAGCC 919708 Query 192521 ACTTGTTACCAC-AGAT-ATTGCAAAATTTAATAAATTAGACGATTATCCAAATGGTATT 192578 | | ||| || ||| | || || |||| | || | ||| |||| || |||| Sbjct 919707 TTTAGGTACTACCAGAGCAATGGAACATTTGA-AATTCAGA-GATTTACCTGCTGGTCAG 919650 Query 192579 AATGCTATTGTTGCTATAGCTTGCTATACTGGCTATAACCAAGAAGACAGTATTATTTTA 192638 ||||||||||| ||||| || || ||| |||| ||||| |||||||| || ||| | Sbjct 919649 AATGCTATTGTAGCTATTGCATGTTATTCTGGATATAATCAAGAAGATTCCATGATTATG 919590 Query 192639 AATAAAGCTTCTATTGAAAGAGGATTATT 192667 ||| || | |||||||| ||||| ||||| Sbjct 919589 AATCAATCATCTATTGATAGAGGTTTATT 919561 Score = 96.9 bits (106), Expect = 4e-15 Identities = 166/235 (71%), Gaps = 11/235 (5%) Strand=Plus/Plus Query 50280 AACACTTG-AAGTTGGAGACTTGGTTAAAAGACA-ATTGATAGATGGTGATGATGTACTA 50337 |||| ||| || |||| || | ||| ||||||| || || |||||||||| ||| || Sbjct 1220533 AACAATTGCAAATTGGGGATATTGTTGAAAGACATATAGA-AGATGGTGATATTGTTTTA 1220591 Query 50338 TTAAATAGGCAACCAACACTTCATAAAGCTTCTATGCAAAGTTTTAAAGTTAAAATTCAA 50397 || ||||| ||||| | | |||| | ||||| | | | | ||||||| | Sbjct 1220592 TTTAATAGACAACCTTCTTTGCATAGACTATCTATCTTATCCCATTATGCTAAAATTAGA 1220651 Query 50398 CCAGTAAAAACATTTA----AAATGAATTTAGCTATGACTAAAGCATATAATGCTGATTT 50453 || | |||||| | ||| |||| | | || || | ||||||| |||||||| Sbjct 1220652 CCTTGGAGAACATTCAGATTAAACGAATGTG--TTTG--TACACCATATAACGCTGATTT 1220707 Query 50454 TGATGGGGATGAAATGAATTTACATGTTCCTCAATCATATGGAGCTACTGCTGAA 50508 |||||| ||||||||||||||||||||||| ||| | | | ||||| |||||| Sbjct 1220708 TGATGGTGATGAAATGAATTTACATGTTCCACAAACTGAAGAAGCTAGAGCTGAA 1220762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628530877877760