Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq18 215 1e-50 seq1 170 4e-37 >seq18 Length=128875 Score = 215 bits (238), Expect = 1e-50 Identities = 179/219 (82%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| |||||||| | ||||||||||| |||||||||||||| || || || |||||||| Sbjct 91035 ACCACCTCTCAATCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAGA 90976 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || ||||||||||||||| |||||| ||||||||||||| |||||||||||| || || Sbjct 90975 TAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGG 90916 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || |||||||| ||||| ||||| || || ||| ||||| || ||| || ||| || Sbjct 90915 AATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATTCGAC 90856 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801 ||||||||| || ||||| || || || ||||| ||||| Sbjct 90855 TTCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGACAAA 90817 >seq1 Length=1362551 Score = 170 bits (188), Expect = 4e-37 Identities = 175/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| ||||| || | | |||||||| | ||| |||||||| || || || || ||||| Sbjct 277375 ACCACCTCTTAATCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 277434 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || | ||||||| ||||||| ||| || ||||| ||||||| |||||||||||| || || Sbjct 277435 TAAAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGG 277494 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || ||||| || ||||| || || || || ||||| || || | |||| || ||| || Sbjct 277495 AATACCTTCTTTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGAC 277554 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||||||| || ||||| || || | || ||||| || || |||||| Sbjct 277555 CTCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATT 277603 Score = 100 bits (110), Expect = 6e-16 Identities = 134/184 (73%), Gaps = 3/184 (2%) Strand=Plus/Minus Query 143985 GATCCAGTCTTGCATATAGAACTTAGGAGATGGGCTGATGTTTTTATTATAGCGCCCTTA 144044 |||||| ||||| | |||||||| |||||||||||||| ||| |||| ||||| || Sbjct 1319637 GATCCAACTTTGCAAGTTGAACTTAGAAGATGGGCTGATGTATTTGTTATTGCGCCATTG 1319578 Query 144045 ACAGCAAATACGTTAGCAAAAATAGCCAATGGTATATGCGATAATTTACTAACATCTATA 144104 | |||||||| ||||| ||||| ||||||||||| || ||| || | || ||| Sbjct 1319577 AGTGCAAATACCTTAGCCAAAATTAGCAATGGTATATCTGACAATCTATTGACTAACATA 1319518 Query 144105 GTAAGAGCCTGG-GATATAAATAAACCTCTTATTTTTTG--CCCCGCTATGAATACCCTT 144161 || |||| |||| | | | ||| ||| | |||| || ||||||||||| || Sbjct 1319517 GTCAGAGGCTGGCCAGTCACCTCAACTCCTTTGTATTTGGCACCTGCTATGAATACTTTT 1319458 Query 144162 ATGT 144165 |||| Sbjct 1319457 ATGT 1319454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826684233899