Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq18 215 1e-50
seq1 170 4e-37
>seq18
Length=128875
Score = 215 bits (238), Expect = 1e-50
Identities = 179/219 (82%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| |||||||| | ||||||||||| |||||||||||||| || || || ||||||||
Sbjct 91035 ACCACCTCTCAATCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAGA 90976
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
|| ||||||||||||||| |||||| ||||||||||||| |||||||||||| || ||
Sbjct 90975 TAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGG 90916
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| |||||||| ||||| ||||| || || ||| ||||| || ||| || ||| ||
Sbjct 90915 AATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATTCGAC 90856
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801
||||||||| || ||||| || || || ||||| |||||
Sbjct 90855 TTCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGACAAA 90817
>seq1
Length=1362551
Score = 170 bits (188), Expect = 4e-37
Identities = 175/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| ||||| || | | |||||||| | ||| |||||||| || || || || |||||
Sbjct 277375 ACCACCTCTTAATCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 277434
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
|| | ||||||| ||||||| ||| || ||||| ||||||| |||||||||||| || ||
Sbjct 277435 TAAAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGG 277494
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| ||||| || ||||| || || || || ||||| || || | |||| || ||| ||
Sbjct 277495 AATACCTTCTTTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGAC 277554
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
|||||||| || ||||| || || | || ||||| || || ||||||
Sbjct 277555 CTCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATT 277603
Score = 100 bits (110), Expect = 6e-16
Identities = 134/184 (73%), Gaps = 3/184 (2%)
Strand=Plus/Minus
Query 143985 GATCCAGTCTTGCATATAGAACTTAGGAGATGGGCTGATGTTTTTATTATAGCGCCCTTA 144044
|||||| ||||| | |||||||| |||||||||||||| ||| |||| ||||| ||
Sbjct 1319637 GATCCAACTTTGCAAGTTGAACTTAGAAGATGGGCTGATGTATTTGTTATTGCGCCATTG 1319578
Query 144045 ACAGCAAATACGTTAGCAAAAATAGCCAATGGTATATGCGATAATTTACTAACATCTATA 144104
| |||||||| ||||| ||||| ||||||||||| || ||| || | || |||
Sbjct 1319577 AGTGCAAATACCTTAGCCAAAATTAGCAATGGTATATCTGACAATCTATTGACTAACATA 1319518
Query 144105 GTAAGAGCCTGG-GATATAAATAAACCTCTTATTTTTTG--CCCCGCTATGAATACCCTT 144161
|| |||| |||| | | | ||| ||| | |||| || ||||||||||| ||
Sbjct 1319517 GTCAGAGGCTGGCCAGTCACCTCAACTCCTTTGTATTTGGCACCTGCTATGAATACTTTT 1319458
Query 144162 ATGT 144165
||||
Sbjct 1319457 ATGT 1319454
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981826684233899
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |