Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq18 89.7 3e-13
seq1 87.8 1e-12
>seq18
Length=128875
Score = 89.7 bits (98), Expect = 3e-13
Identities = 154/221 (70%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||||||||| | || || || |||||||| |||||||| ||||||||||| |
Sbjct 91036 CACCACCTCTCAATCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAG 90977
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| | || | |||| || |||||||| || ||||| || || | || ||||| | |
Sbjct 90976 ATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTG 90917
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | |||||| ||||| || || | | ||| ||| | || || |||||
Sbjct 90916 GAATACCTTCCTTGTCTTGGATCTT-GGCCTTGACAGCGTCAATAGTTTCAGCAGATTCG 90858
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAA 33740
|| || | ||||| || ||||| ||||| || || |||||
Sbjct 90857 ACTTCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGACAAA 90817
>seq1
Length=1362551
Score = 87.8 bits (96), Expect = 1e-12
Identities = 159/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
|||||||||| || | ||| || || |||| |||| |||||||| |||||||| || |
Sbjct 277374 CACCACCTCTTAATCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAG 277433
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| | || | | || || ||||| || || || || || || | || ||||| | |
Sbjct 277434 ATAAAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTG 277493
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | |||||||||||| ||||| | | ||||| ||| | | || |||||
Sbjct 277494 GAATACCTTCTTTGTCTTGGATTTT-AGCCTTAACATTGTCGATAGAATCAGAAGATTCG 277552
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || | || || || ||||| |||| |||||||| || || |||||
Sbjct 277553 ACCTCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCAT 277602
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703835750720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |