Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq18 105 2e-17 seq4 86.0 1e-11 >seq18 Length=128875 Score = 105 bits (116), Expect = 2e-17 Identities = 149/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || | || || || || |||||||||||||| ||| | |||| || | Sbjct 90816 TTTTGTCAAGACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTGCTGAAACTAT 90875 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 || | || ||| ||||| ||||| || ||||| ||| || || |||||| | Sbjct 90876 TGACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATT 90935 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 ||||| || || || || || ||||| || || || || | ||||||||| |||| || Sbjct 90936 AATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAACATCCAAAA 90995 Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||| |||||||| ||| | ||| | ||| Sbjct 90996 AGAATCTACTCTACACTTAGTTCTAAGA 91023 >seq4 Length=144043 Score = 86.0 bits (94), Expect = 1e-11 Identities = 161/234 (69%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166 || |||||||| || ||||| || ||||| || | ||| || | || ||| || | Sbjct 46153 GCATCCTTGTAAACAATGAAAGGAGTACCAGTTTCGGTTTGGGCTTCTAAGATGGCGTAC 46094 Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226 || | | ||| || || | ||| |||| |||| |||||| ||||||| ||||| Sbjct 46093 CATAACTTTTGAGCCTTGATGGTCTTTCTACCTCTACCTTCTAATTCGTATTGGTCATAT 46034 Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCG-TCAAGACCGGGAGCTTCCTTCGGACAAAA 173285 || | ||| || || | || ||| || |||| ||| |||||||| | ||| | || Sbjct 46033 AGCTTTTCAAAGTCATCACCATAAGCATCACTCAA-ACCAGGAGCTTCACTAGGAGAGAA 45975 Query 173286 GAGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCA 173339 | | |||||| |||| | || ||| ||||||||||| | ||| | | |||| Sbjct 45974 TAAAGTCCAATCACCATTTGCCTTGACTCTCTTCATGAACAAGTCAGGAATCCA 45921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820179174761