Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq1 125 7e-24
seq18 98.7 1e-15
>seq1
Length=1362551
Score = 125 bits (138), Expect = 7e-24
Identities = 169/233 (73%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || || || | ||||| |||||||| ||||||||||||||||| |
Sbjct 277376 CCACCTCTTAATCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAT 277435
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | || || || || || || || | || ||||| || ||
Sbjct 277436 AAAGTTCTACCA-TCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGG 277494
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| |||||||| ||||| ||||| || || ||| | | || || ||||| ||
Sbjct 277495 AATACCTTCTTTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGAC 277554
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGT 134718
|| | ||||||||| ||||| |||| |||||| |||||||||||||||||||
Sbjct 277555 CTCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTTTGT 277607
>seq18
Length=128875
Score = 98.7 bits (108), Expect = 1e-15
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| | || | || | |||||| || ||||| ||||| |||||||| ||
Sbjct 91034 CCACCTCTCAATCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAGAT 90975
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| || | ||||| || ||||| || || | || ||||| || ||
Sbjct 90974 AAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGA 90915
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || ||||| || || ||||| ||||| | || || | ||||| ||
Sbjct 90914 ATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATTCGACT 90855
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705
|| | ||| ||||| ||||||||||| || || || |||
Sbjct 90854 TCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGACAAAA 90816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398140983320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |