Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq13 192 5e-44 seq38 158 1e-33 seq1 129 5e-25 >seq13 Length=415809 Score = 192 bits (212), Expect = 5e-44 Identities = 430/636 (68%), Gaps = 16/636 (3%) Strand=Plus/Minus Query 43655 AGCTTAAAAATGGCGAATGTTTTGCTTACAGAAAATCCGTCTAGGTTTGTCGTGTTTCCA 43714 |||| ||||| | |||| ||||| | |||||||| || || || | || ||| Sbjct 173954 AGCTGAAAAA-GACGAA-GTTTTATTAACAGAAAACAAAAGAAGATTCGTTTTATTCCCA 173897 Query 43715 ATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCA 43774 ||| ||| | || || ||| || || || | ||| | || || || ||||| || Sbjct 173896 ATTAAATTCCCAGAAATTTGGGAAGCCTATAAGAGAGCCGAAGCTTCTTTCTGGACCGCT 173837 Query 43775 GAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGATTGCATTAA--AACCACAA-GA 43830 |||||| | |||||| |||| || ||| ||| |||||| | || || | || || Sbjct 173836 GAAGAAATCGATTTGTCTAAGGATTTA-CACGATTGGAATAACAGAATGAATGAAAATGA 173778 Query 43831 AAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGA 43890 || | ||| || || || ||||| || |||||||| || || || |||||||| Sbjct 173777 AAGATTTTTCATTTCAAGAGTCTTGGCTTTCTTTGCTGCTTCTGATGGTATTGTCAATGA 173718 Query 43891 AAATTTGGTT---AGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTA 43947 ||| |||||| | | | ||| ||||||||| | |||||||| ||||| || Sbjct 173717 AAACTTGGTTGAAAATTTCTCTGCT---GAAGTTCAAATTCCAGAAGCTAAGTGTTTCTA 173661 Query 43948 TGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATAC 44007 || || |||||| || ||||| ||||| || |||| || | | | |||| || Sbjct 173660 CGGTTTCCAAATTATGATGGAAAACATTCACTCTGAAACTTATTCTTTATTATTAGACAC 173601 Query 44008 GTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGC 44067 |||||||| ||| | || || || || || || || |||||||| | |||| Sbjct 173600 ATACATCAAGGATCCAAAGGAAAATGATTTCTTATTAAACGCTATAGAAACTATTCCTGA 173541 Query 44068 GATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCTTT---TGG 44124 ||||| | || || || ||||| ||| |||||| | || || |||| || Sbjct 173540 AATTAAGGAAAAGGCTGAATGGGCTATTAGATGGATTCAAGATAAGGACGCTTTGTTTGC 173481 Query 44125 AGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGC 44184 ||| |||| || || ||||| | ||| ||||| | || || || || || ||||| || Sbjct 173480 TGAAAGACTGGTTGCTTTTGCTGCTGTTGAAGGTGTCTTTTTCTCTGGTTCATTTGCTGC 173421 Query 44185 CATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAAT 44244 || || ||||| |||||| |||||||||||||| ||||| || || || || || || Sbjct 173420 TATCTTCTGGTTGAAGAAAAAGGGTTTGATGCCTGGTTTGACTTTCTCCAACGAATTGAT 173361 Query 44245 AAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTG 44280 || | |||||||| |||||| || ||||| || Sbjct 173360 CTGTAGAGATGAAGGTTTACATACTGACTTTGCCTG 173325 >seq38 Length=279578 Score = 158 bits (174), Expect = 1e-33 Identities = 333/494 (67%), Gaps = 16/494 (3%) Strand=Plus/Minus Query 19348 GGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGT 19407 || ||||| || || || || || ||| || || || || ||||||||| || || || Sbjct 131759 GGTCTTTTACTATACGGTCCTCCAGGTACAGGTAAGACTTTGATTGCGAGAAAAATTGGT 131700 Query 19408 AAATTACTTA---CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAA 19464 || | | | ||||| ||||| || ||||| |||||||||||||| || | ||| Sbjct 131699 AATATGTTGAATGCAAAAGAACCT---AAGATTGTTAATGGTCCTGAAATATTGAGTAAG 131643 Query 19465 TATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAA 19524 ||||| ||| || |||||||| | || |||||| || ||||| ||||| | Sbjct 131642 TATGTTGGTTCTTCTGAAGAAAACATTAGAAATTTGTTCAAGGATGCTGAGCAAGAATAT 131583 Query 19525 AAACGTTTAGGGCGCAAAAGT--TCTTTGCACATTATAATACTAGATGAATTGGACGCAA 19582 || || || | || | | ||||| |||||||| || | ||||||||||| | Sbjct 131582 AA--GTCTAAAGGTGAAGAATCATCTTTACACATTATTATCTTTGATGAATTGGATTCTG 131525 Query 19583 TCTGTAAGCAAAGAGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATC 19636 | | || ||||||||||| || || | || ||| ||| | |||||| || | Sbjct 131524 TTTTCAAACAAAGAGGTTCAAGAGGTGATGGTACAGGTGTAGGTGATAATGTTGTTAACC 131465 Query 19637 AACTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGA 19696 | | | | || | || |||||| | ||| | ||||||||||| |||||||| |||| Sbjct 131464 AGTTGTTAGCCAAGATGGATGGTGTTGATCAATTAAATAATATTTTGGTTATTGGTATGA 131405 Query 19697 CTAATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGA 19756 | |||||| || | ||||| | ||| | || |||| ||| | || ||| | | Sbjct 131404 CAAATAGAAGAGATCTTATAGATAACGCTCTTTTGAGACCAGGTAGATTTGAAGTTCAAG 131345 Query 19757 TCGAAATTAACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAA 19816 | ||||| || |||| |||||| ||| | || |||||||| | || || ||| || Sbjct 131344 TTGAAATCAAGCTACCTGATGAAGCTGGTAGATTGCAAATTTTAGAAATTCAAACAAAAA 131285 Query 19817 CCATGCGACAAAAT 19830 ||| || | ||| Sbjct 131284 AAATGAGAGATAAT 131271 >seq1 Length=1362551 Score = 129 bits (142), Expect = 5e-25 Identities = 447/689 (65%), Gaps = 39/689 (6%) Strand=Plus/Plus Query 40692 TTTCCGTTGCTAACTACaaaaaaaaTGTTTTGGAAAGGCATTGCAGAAGAACTGTTATGG 40751 ||||| || |||| ||||||| | | ||| |||| ||| || |||||| | ||| Sbjct 1128311 TTTCCTTTATTAACAACAAAAAGAGTATTTACCAAAGCTATTATAGTAGAACTTCTTTGG 1128370 Query 40752 TTTATCAAAGGTTGTACTAATGCTAAGAAATTATCAGAAAGA-GGAGTGCACATTTGGAA 40810 ||| | || || ||| ||| || || || || ||||| || || | |||||| | Sbjct 1128371 TTTGTTAAGGGAGATACCAATAACAAAAATCTA-CAAAAAGAAGGCGTCAAAATTTGGGA 1128429 Query 40811 TGCGCACAGTTCT----AAAACATATTTGTCTAGCATAGGATTACAAGATAGGGATGAAG 40866 || | ||||| || || || | ||| | || ||| || || || |||| Sbjct 1128430 TGGTAATGGTTCTCGTGAATACCTAGAT-TCTC---TTGGGTTAACTGACAGAGAAGAAG 1128485 Query 40867 GTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGACACTA 40926 ||||| | |||||||||||||| || || | | |||||||||| || |||||| | Sbjct 1128486 GTGATTTAGGTCCTGTTTATGGTTTCCAATGGAGACATTTTGGTGCTGAATATGTTGAT- 1128544 Query 40927 TGT-ACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAG---ATACG 40982 ||| || |||| || || || |||||| ||||||||| ||| |||| ||| | Sbjct 1128545 TGTCACACTGACTACACAAACAAAGGATACGATCAATTAA---GCGATATAATTCATAAG 1128601 Query 40983 ATTAAATCCGATCC---CGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGAC 41039 | || || |||| |||||| || || || ||| || ||||| ||| | ||| Sbjct 1128602 TTGAAGACCAATCCTTACGATAGAAGA---ATCATCATGTCTGCTTGGAATCCACCAGAC 1128658 Query 41040 GTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTG------- 41092 | | ||||| | || || || || | || ||||| || || |||| Sbjct 1128659 TTTAAGAAAATGGCTCTTCCGCCATGCCACGTTTTCTGTCAATTCTATGTTTCTTTCCCT 1128718 Query 41093 ------CAATGG--TGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTA 41144 ||| | | || |||||||| || || |||||||| |||| ||||| | Sbjct 1128719 AAAGACCAAAAGCCTCAATTGTCATGTATCTTATACCAAAGATCTTGTGATATGGGGTTG 1128778 Query 41145 GGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACC 41204 || || || || ||||| || ||||||| || | || ||||||||| | ||| Sbjct 1128779 GGTGTTCCTTTCAACATTGCTTCTTATGCTTTGTTGACCAGAATGATTGCAAAGGTTGTT 1128838 Query 41205 AATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCAC 41264 || | | |||||||||| ||||||| | || |||| || |||||| |||| Sbjct 1128839 GATATGGATTGTGGTGAATTTATTCACACCATGGGTGATGCTCACGTTTACAAGGATCAT 1128898 Query 41265 ATAGAGCCGTTAACAGAACAACTGACACGAAAACCTAGACCATTTCCAACGCTACTTATT 41324 |||| | || | ||||||| | | ||| || ||| ||| || || || || Sbjct 1128899 GTAGATGCTTTGAAAGAACAAATTGAAAGAACTCCAAGAGAATTCCCTACTTTAGAAATA 1128958 Query 41325 AAACGCGCTGTTGAAAACATTGATGATTT 41353 ||| | | | || || ||||||||||||| Sbjct 1128959 AAAAGAGATATTAAAGACATTGATGATTT 1128987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455801396205