Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq13 192 5e-44
seq38 158 1e-33
seq1 129 5e-25
>seq13
Length=415809
Score = 192 bits (212), Expect = 5e-44
Identities = 430/636 (68%), Gaps = 16/636 (3%)
Strand=Plus/Minus
Query 43655 AGCTTAAAAATGGCGAATGTTTTGCTTACAGAAAATCCGTCTAGGTTTGTCGTGTTTCCA 43714
|||| ||||| | |||| ||||| | |||||||| || || || | || |||
Sbjct 173954 AGCTGAAAAA-GACGAA-GTTTTATTAACAGAAAACAAAAGAAGATTCGTTTTATTCCCA 173897
Query 43715 ATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCA 43774
||| ||| | || || ||| || || || | ||| | || || || ||||| ||
Sbjct 173896 ATTAAATTCCCAGAAATTTGGGAAGCCTATAAGAGAGCCGAAGCTTCTTTCTGGACCGCT 173837
Query 43775 GAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGATTGCATTAA--AACCACAA-GA 43830
|||||| | |||||| |||| || ||| ||| |||||| | || || | || ||
Sbjct 173836 GAAGAAATCGATTTGTCTAAGGATTTA-CACGATTGGAATAACAGAATGAATGAAAATGA 173778
Query 43831 AAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGA 43890
|| | ||| || || || ||||| || |||||||| || || || ||||||||
Sbjct 173777 AAGATTTTTCATTTCAAGAGTCTTGGCTTTCTTTGCTGCTTCTGATGGTATTGTCAATGA 173718
Query 43891 AAATTTGGTT---AGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTA 43947
||| |||||| | | | ||| ||||||||| | |||||||| ||||| ||
Sbjct 173717 AAACTTGGTTGAAAATTTCTCTGCT---GAAGTTCAAATTCCAGAAGCTAAGTGTTTCTA 173661
Query 43948 TGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATAC 44007
|| || |||||| || ||||| ||||| || |||| || | | | |||| ||
Sbjct 173660 CGGTTTCCAAATTATGATGGAAAACATTCACTCTGAAACTTATTCTTTATTATTAGACAC 173601
Query 44008 GTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGC 44067
|||||||| ||| | || || || || || || || |||||||| | ||||
Sbjct 173600 ATACATCAAGGATCCAAAGGAAAATGATTTCTTATTAAACGCTATAGAAACTATTCCTGA 173541
Query 44068 GATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCTTT---TGG 44124
||||| | || || || ||||| ||| |||||| | || || |||| ||
Sbjct 173540 AATTAAGGAAAAGGCTGAATGGGCTATTAGATGGATTCAAGATAAGGACGCTTTGTTTGC 173481
Query 44125 AGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGC 44184
||| |||| || || ||||| | ||| ||||| | || || || || || ||||| ||
Sbjct 173480 TGAAAGACTGGTTGCTTTTGCTGCTGTTGAAGGTGTCTTTTTCTCTGGTTCATTTGCTGC 173421
Query 44185 CATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAAT 44244
|| || ||||| |||||| |||||||||||||| ||||| || || || || || ||
Sbjct 173420 TATCTTCTGGTTGAAGAAAAAGGGTTTGATGCCTGGTTTGACTTTCTCCAACGAATTGAT 173361
Query 44245 AAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTG 44280
|| | |||||||| |||||| || ||||| ||
Sbjct 173360 CTGTAGAGATGAAGGTTTACATACTGACTTTGCCTG 173325
>seq38
Length=279578
Score = 158 bits (174), Expect = 1e-33
Identities = 333/494 (67%), Gaps = 16/494 (3%)
Strand=Plus/Minus
Query 19348 GGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGT 19407
|| ||||| || || || || || ||| || || || || ||||||||| || || ||
Sbjct 131759 GGTCTTTTACTATACGGTCCTCCAGGTACAGGTAAGACTTTGATTGCGAGAAAAATTGGT 131700
Query 19408 AAATTACTTA---CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAA 19464
|| | | | ||||| ||||| || ||||| |||||||||||||| || | |||
Sbjct 131699 AATATGTTGAATGCAAAAGAACCT---AAGATTGTTAATGGTCCTGAAATATTGAGTAAG 131643
Query 19465 TATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAA 19524
||||| ||| || |||||||| | || |||||| || ||||| ||||| |
Sbjct 131642 TATGTTGGTTCTTCTGAAGAAAACATTAGAAATTTGTTCAAGGATGCTGAGCAAGAATAT 131583
Query 19525 AAACGTTTAGGGCGCAAAAGT--TCTTTGCACATTATAATACTAGATGAATTGGACGCAA 19582
|| || || | || | | ||||| |||||||| || | ||||||||||| |
Sbjct 131582 AA--GTCTAAAGGTGAAGAATCATCTTTACACATTATTATCTTTGATGAATTGGATTCTG 131525
Query 19583 TCTGTAAGCAAAGAGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATC 19636
| | || ||||||||||| || || | || ||| ||| | |||||| || |
Sbjct 131524 TTTTCAAACAAAGAGGTTCAAGAGGTGATGGTACAGGTGTAGGTGATAATGTTGTTAACC 131465
Query 19637 AACTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGA 19696
| | | | || | || |||||| | ||| | ||||||||||| |||||||| ||||
Sbjct 131464 AGTTGTTAGCCAAGATGGATGGTGTTGATCAATTAAATAATATTTTGGTTATTGGTATGA 131405
Query 19697 CTAATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGA 19756
| |||||| || | ||||| | ||| | || |||| ||| | || ||| | |
Sbjct 131404 CAAATAGAAGAGATCTTATAGATAACGCTCTTTTGAGACCAGGTAGATTTGAAGTTCAAG 131345
Query 19757 TCGAAATTAACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAA 19816
| ||||| || |||| |||||| ||| | || |||||||| | || || ||| ||
Sbjct 131344 TTGAAATCAAGCTACCTGATGAAGCTGGTAGATTGCAAATTTTAGAAATTCAAACAAAAA 131285
Query 19817 CCATGCGACAAAAT 19830
||| || | |||
Sbjct 131284 AAATGAGAGATAAT 131271
>seq1
Length=1362551
Score = 129 bits (142), Expect = 5e-25
Identities = 447/689 (65%), Gaps = 39/689 (6%)
Strand=Plus/Plus
Query 40692 TTTCCGTTGCTAACTACaaaaaaaaTGTTTTGGAAAGGCATTGCAGAAGAACTGTTATGG 40751
||||| || |||| ||||||| | | ||| |||| ||| || |||||| | |||
Sbjct 1128311 TTTCCTTTATTAACAACAAAAAGAGTATTTACCAAAGCTATTATAGTAGAACTTCTTTGG 1128370
Query 40752 TTTATCAAAGGTTGTACTAATGCTAAGAAATTATCAGAAAGA-GGAGTGCACATTTGGAA 40810
||| | || || ||| ||| || || || || ||||| || || | |||||| |
Sbjct 1128371 TTTGTTAAGGGAGATACCAATAACAAAAATCTA-CAAAAAGAAGGCGTCAAAATTTGGGA 1128429
Query 40811 TGCGCACAGTTCT----AAAACATATTTGTCTAGCATAGGATTACAAGATAGGGATGAAG 40866
|| | ||||| || || || | ||| | || ||| || || || ||||
Sbjct 1128430 TGGTAATGGTTCTCGTGAATACCTAGAT-TCTC---TTGGGTTAACTGACAGAGAAGAAG 1128485
Query 40867 GTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGACACTA 40926
||||| | |||||||||||||| || || | | |||||||||| || |||||| |
Sbjct 1128486 GTGATTTAGGTCCTGTTTATGGTTTCCAATGGAGACATTTTGGTGCTGAATATGTTGAT- 1128544
Query 40927 TGT-ACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAG---ATACG 40982
||| || |||| || || || |||||| ||||||||| ||| |||| ||| |
Sbjct 1128545 TGTCACACTGACTACACAAACAAAGGATACGATCAATTAA---GCGATATAATTCATAAG 1128601
Query 40983 ATTAAATCCGATCC---CGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGAC 41039
| || || |||| |||||| || || || ||| || ||||| ||| | |||
Sbjct 1128602 TTGAAGACCAATCCTTACGATAGAAGA---ATCATCATGTCTGCTTGGAATCCACCAGAC 1128658
Query 41040 GTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTG------- 41092
| | ||||| | || || || || | || ||||| || || ||||
Sbjct 1128659 TTTAAGAAAATGGCTCTTCCGCCATGCCACGTTTTCTGTCAATTCTATGTTTCTTTCCCT 1128718
Query 41093 ------CAATGG--TGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTA 41144
||| | | || |||||||| || || |||||||| |||| ||||| |
Sbjct 1128719 AAAGACCAAAAGCCTCAATTGTCATGTATCTTATACCAAAGATCTTGTGATATGGGGTTG 1128778
Query 41145 GGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACC 41204
|| || || || ||||| || ||||||| || | || ||||||||| | |||
Sbjct 1128779 GGTGTTCCTTTCAACATTGCTTCTTATGCTTTGTTGACCAGAATGATTGCAAAGGTTGTT 1128838
Query 41205 AATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCAC 41264
|| | | |||||||||| ||||||| | || |||| || |||||| ||||
Sbjct 1128839 GATATGGATTGTGGTGAATTTATTCACACCATGGGTGATGCTCACGTTTACAAGGATCAT 1128898
Query 41265 ATAGAGCCGTTAACAGAACAACTGACACGAAAACCTAGACCATTTCCAACGCTACTTATT 41324
|||| | || | ||||||| | | ||| || ||| ||| || || || ||
Sbjct 1128899 GTAGATGCTTTGAAAGAACAAATTGAAAGAACTCCAAGAGAATTCCCTACTTTAGAAATA 1128958
Query 41325 AAACGCGCTGTTGAAAACATTGATGATTT 41353
||| | | | || || |||||||||||||
Sbjct 1128959 AAAAGAGATATTAAAGACATTGATGATTT 1128987
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455801396205
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |