Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq4 113 4e-20 >seq4 Length=144043 Score = 113 bits (124), Expect = 4e-20 Identities = 772/1228 (63%), Gaps = 44/1228 (4%) Strand=Plus/Minus Query 130786 TCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTGTGC 130845 |||| ||| ||||| ||||| |||||||| |||| |||| || || ||||| | Sbjct 46820 TCTAGAGTACATGTTAGAAGTGAATGGTTCAAAACATTCATTGTAACCTAAAATTTGGGA 46761 Query 130846 TGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGCGTCGTGAT 130905 |||| || || ||||| || || |||| || || | | ||||||| | | || Sbjct 46760 AGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAAACCGTGCTTGGCAAT 46701 Query 130906 TTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTAGGTTTGA-CATTGTTCCACATAT 130964 || |||||||||| ||||||||||| ||||| ||| || || |||||| | || Sbjct 46700 CTTAGCCTTCAATTCAGTCCAATCCCATA---AGGTA-GTTGGAGCAACGTTCCAGAAAT 46645 Query 130965 CAAATTGTAGTATGCCTTTACTGGCGGGACTGGATTCGAACGATTCGTAGATTCCTTCGA 131024 | |||||| | |||| | || ||| |||| | || | ||| ||||||| | Sbjct 46644 CGTATTGTAAAACACCTTGAGAAGCTGGAGAACCTTCGTAAGAAGCATAGGTTCCTTCAA 46585 Query 131025 CACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAATTTGTT 131084 ||| | || || |||||||||||| ||| ||||||||||||| |||||| Sbjct 46584 TTTCAGCTAATTCAGTGGAAGCTTCCAAAGCAGCGTGATAAATGGTTTCGAAAATTTGAA 46525 Query 131085 TATTTAATTGTTTCGCTTGGTTGCTCTCGTAAGGAAATTTCATTAAAATAAAAGCGTCTG 131144 | || |||| || |||| | ||| | |||| | | | | ||||||| || | Sbjct 46524 TGTTCAATTCCTTGGCTTTTTCAGAATCGAATGGAACTCTTAACATCATAAAAGTATCAG 46465 Query 131145 CGAGACCCTGTATCCCAACGCCCACCGGTCTATGTTTTAAATTACATTTACGCGAACATT 131204 | | ||| || | || ||| | | ||||| ||| | | || || | | | | || Sbjct 46464 CCAAACCTTGAACACCTACGGCAATAGGTCTGTGTCTCATGTTGGATCTTCTAGCAGTTT 46405 Query 131205 CGGTGGGATAAAGGTTAATGTCAATTATTTTGTTTAAATT----GC----GCACTACAAT 131256 | || ||| ||| ||||||| | |||||| || || | ||||| Sbjct 46404 CAACAGGGTAATAGTTTCTGTCAATAACAGCGTTTAAGTTCTTAGCAATAACCTTACAAA 46345 Query 131257 TTGTGTGACGCTTTTCAATTTGTCGAAA---TCAAACGTGCCAGTTTC---GAGGTTTAC 131310 | |||| | |||| | ||| || | | | | | ||| || ||||| Sbjct 46344 CTTCGTGAAGTTTTTTGA--AGTCATAAGTTTGAGTCTTTTGATCTTCGGAGACCTTTAC 46287 Query 131311 AAA--TTGATTTACACATATTGACGCCAGATTACAAACTGCCGTTTCGTCATAATCGCAA 131368 ||| || | | || | || || | |||||||| || ||||| | || ||| | Sbjct 46286 AAAGGCTG-GTAAGGCA-ACAGAAGCTAAGTTACAAACAGCAGTTTCCTTATCATCTGAG 46229 Query 131369 TACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTGCCCAAATTTTGTTGATTG 131428 || | ||||||||| || || ||| || || || ||||| || | |||||| Sbjct 46228 TATTCAACAATTTCACAACATAAGTTAGAAGATTTAATTGTACCCAAGTTCTTTTGATTA 46169 Query 131429 CTTTTAGCATTCACATG-GTCCTTGTACATCATGTAGGGCGTGCCCGTTTCGACTTGAGT 131487 ||| ||| ||| | |||||||| | ||| | || || || |||||| ||| | Sbjct 46168 GATTTTTTATT-ACAAGCATCCTTGTAAACAATGAAAGGAGTACCAGTTTCGGTTTGGGC 46110 Query 131488 TTCAATAATGTATCGAA--AGAGTTTTCGAGCAGACAATTGATATTTGTA--TTGGCCGC 131543 ||| ||| | || | | | ||| |||| | || | ||| || | || Sbjct 46109 TTC--TAAGATGGCGTACCATAACTTTTGAGCCTTGA--TGGTCTTTCTACCTCTACCTT 46054 Query 131544 GTTTTTCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCCAAACGAACTGTCCAAATTGG 131603 | |||||| | || || | | ||||||||| | ||| | | | |||| | Sbjct 46053 CTAATTCGTATTGGTCATATAGCTTTTCAAAGTCATCACCATAAGCATCACTCAAACCAG 45994 Query 131604 GACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACA 131663 || ||| || ||| | | || | ||| | || || | |||| |||||| |||| Sbjct 45993 GAGCTTCACTAGGAGAGAATAAAGTCCAATCACCATTTGCCTTGACTCTCTTCATGAACA 45934 Query 131664 AATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAA 131723 | || || | |||||| || || | |||||||||| | | ||||| |||| | Sbjct 45933 AGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCTTCCTTACCGTGAT 45874 Query 131724 tttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCA 131783 ||||| | | | | || || || || || | ||||| ||||| | |||| || | Sbjct 45873 TTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCCATGGTTCTAGGTACAGAGCAA 45814 Query 131784 TTGCGCC------TTTGCGCTTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATA 131837 || || |||| ||||| ||||||| ||| | | | |||||||| | | Sbjct 45813 AGGCACCAGGTCTTTTG---TTACCACCTTGATCAACGTATCTGGCAGTGTTGTTGAAAA 45757 Query 131838 CGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCAT 131897 | | | ||| || |||||| |||| | |||||||| | |||||| |||| Sbjct 45756 CTCTAACCATAGGTATCAAACCATTGGAAGTACCATTGGTACCAGCAATGTAAGAGCCAG 45697 Query 131898 TGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGC 131957 ||| |||||| ||||||| || | |||||||| ||| | ||||| ||| | || | Sbjct 45696 TGGATCTGATGTTGTGAATGTGTAAACCAATACCACCGGCAGTCTTAGAAATTTGAGCAC 45637 Query 131958 ATTTGGTTAGAGTGTTATAGATACCTTC 131985 ||| ||| || | ||||||||| || Sbjct 45636 ATTCCTTTAAGGTATCATAGATACCGTC 45609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934187665592