Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq4 239 6e-58 >seq4 Length=144043 Score = 239 bits (264), Expect = 6e-58 Identities = 825/1279 (65%), Gaps = 21/1279 (2%) Strand=Plus/Minus Query 118364 ACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC 118423 |||||| || ||||| || || || | | |||| | || |||| || || ||||| Sbjct 46631 ACCTTGAGAAGCTGGAGAACCTTCGTAAGAAGCATAGGTTCCTTCAATTTCAGCTAATTC 46572 Query 118424 GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTT 118483 | | || || | || |||||||| || ||||| ||||| || |||| | |||| Sbjct 46571 AGTGGAAGCTTCCAAAGCAGCGTGATAAATGGTTTCGAAAATTTGAATGTTCAATTCCTT 46512 Query 118484 GGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGAC 118543 ||| | || ||||| || | | || ||| ||||| ||| || | |||||| || Sbjct 46511 GGCTTTTTCAGAATCGAATGGAACTCTTAACATCATAAAAGTATCAGCCAAACCTTGAAC 46452 Query 118544 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAA 118603 ||| | | |||| || | |||||||| || || | | ||| || || || || ||| | Sbjct 46451 ACCTACGGCAATAGGTCTGTGTCTCATGTTGGATCTTCTAGCAGTTTCAACAGGGTAATA 46392 Query 118604 ATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTT 118663 || || || ||||| |||| || || | | |||||| | ||| ||||| || Sbjct 46391 GTTTCTGTCAATAACAGCGTTTAAGTTCTTAGCAATAACCTTACAAACTTCGTGAAGTTT 46332 Query 118664 TTCGTAATCAAAACTGCGAGTCTCTTCATTGAC--ATAC--TTAGGAAGG--------GC 118711 || | | ||| || | |||||| || || | | || ||| |||| || Sbjct 46331 TTTGAAGTCATAAGTTTGAGTCTTTTGATCTTCGGAGACCTTTACAAAGGCTGGTAAGGC 46272 Query 118712 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 118771 | || || | ||||| |||| || || | | ||| | ||| || | |||||| Sbjct 46271 AACAGAAGCTAAGTTACAAACAGCAGTTTCCTTATCATCTGAGTATTCAACAATTTCACA 46212 Query 118772 GCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 118831 || ||||| ||| ||||| || ||||||||||||||||| || ||| | ||||| || Sbjct 46211 ACATAAGTTAGAAGATTTAATTGTACCCAAGTTCTTTTGATTAGATTTTTTATTACAAGC 46152 Query 118832 ATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 118891 ||||||||||| ||| | || || || || || ||||||| | | || || | ||| Sbjct 46151 ATCCTTGTAAACAATGAAAGGAGTACCAGTTTCGGTTTGGGCTTCTAAGATGGCGTACCA 46092 Query 118892 GACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTG-TAGA 118950 | | ||| | || | ||| || ||| ||||| || || || | Sbjct 46091 TAACTTTTGAGCCTTGATGGTCTTTCTACCTCTACCTTCTAATTCGTA-TTGGTCATATA 46033 Query 118951 GGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGA 119010 | |||||| || ||||| || || | || || || | | || |||| | Sbjct 46032 GCTTTTCAAAGTCATCACCATAAGCATCACTCAAACCAGGAGCTTCACTAGGAGAGAATA 45973 Query 119011 GAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG 119070 || ||| | |||| ||| || | ||||||||| | ||| || ||||| | || | Sbjct 45972 AAGTCCAATCACCATTTGCCTTGACTCTCTTCATGAACAAGTCAGGAATCCATAAAGCTG 45913 Query 119071 AGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 119130 ||| | ||| | | | |||||| | || ||||| | | || | || | Sbjct 45912 GGAATAAATCTCTAGCTCTGATTTCTTCCTTACCGTGATTTTTTCTGATGTCGATGAAAT 45853 Query 119131 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTACGACGA 119186 | | |||||| | |||||| ||||| ||||||| || | | || ||| | | Sbjct 45852 CAAAGATATCAGAGTGCCATGGTTCTAGGTACAGAGCAAAGGCACCAGGTCTTTTGTT-A 45794 Query 119187 CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCA 119246 ||| | || | || || || |||||| ||| || || | || ||| || || | |||| Sbjct 45793 CCACCTTGATCAACGTATCTGGCAGTGTTGTTGAAAACTCTAACCATAGGTATCAAACCA 45734 Query 119247 TCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGC 119306 | ||| ||||| || || ||| ||| | ||| ||||| | ||| ||||| Sbjct 45733 TTGGAAGTACCATTGGTACCAGCAATGTAAGAGCCAGTGGATCTGATGTTGTGAATGTGT 45674 Query 119307 ATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATC 119366 | ||||||||| || || ||| || ||||| || || ||| | | | | ||||| Sbjct 45673 AAACCAATACCACCGGCAGTCTTAGAAATTTGAGCACATTCCTTTAAGGTATCATAGATA 45614 Query 119367 CCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGT 119426 || || || || ||| |||| | | || | ||| || ||||||||||| || || Sbjct 45613 CCGTCAATAGAATCATCCTTCATAGAAATTAAGAAACAAGAAGACATTTGAGGTCTTGGA 45554 Query 119427 GTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGTCG 119486 |||||||| ||||| || ||||| | || ||| | || | ||| |||||| || | Sbjct 45553 GTACCAGCATTGAATAGTGTTGGAGAAGCATGGGTAAAGTATCTTTGAGACATCAAGTTG 45494 Query 119487 TAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAAC 119546 || || || | ||| ||||| ||| ||||| ||||| | | || | ||||| | Sbjct 45493 TAAGTTTCGATGACTTTTTCAATGTTTTCACCGTGGATACCAACAGCAACTCTCATAATC 45434 Query 119547 ATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTA-ACTCTTCTCCAA 119605 | | ||| ||| |||| | | |||||| || | || | ||| |||| ||||| Sbjct 45433 AAATGTTGTGGTCTTTCAACGATCTTACCATTGATCTTCAATAAGTATGATCTT-TCCAA 45375 Query 119606 GGTCTTGAGACCAAAATAG 119624 ||||||| |||||||||| Sbjct 45374 TGTCTTGAAACCAAAATAG 45356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434883051960