Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq4 253 2e-62 seq13 100 3e-16 seq7 86.0 7e-12 seq37 84.2 3e-11 >seq4 Length=144043 Score = 253 bits (280), Expect = 2e-62 Identities = 1126/1760 (64%), Gaps = 61/1760 (3%) Strand=Plus/Plus Query 104216 GAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGAT 104275 |||| ||||| | || | ||| | || || | ||||| || || ||| ||||||| Sbjct 45417 GAAAGACCACAACATTTGATTATGAGAGTTGCTGTTGGTATCCACGGTGAAAACATTGAA 45476 Query 104276 TCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACC 104335 ||| | || || ||| || |||||| ||| | || | || || | ||||| Sbjct 45477 AAAGTCATCGAAACTTACAACTTGATGTCTCAAAGATACTTTACCCATGCTTCTCCAACA 45536 Query 104336 CTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAG 104395 || |||||||||||||| |||||||| |||||||| ||| ||| | || | | ||| Sbjct 45537 CTATTCAATGCTGGTACTCCAAGACCTCAAATGTCTTCTTGTTTCTTAATTTCTATGAAG 45596 Query 104396 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 104455 || || || || |||||||||||| || | | ||| ||||| ||||| || ||| Sbjct 45597 GATGATTCTATTGACGGTATCTATGATACCTTAAAGGAATGTGCTCAAATTTCTAAGACT 45656 Query 104456 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 104515 || || |||||||| | ||||| || | | ||| ||| | ||| ||| || Sbjct 45657 GCCGGTGGTATTGGTTTACACATTCACAACATCAGATCCACTGGCTCTTACATTGCTGGT 45716 Query 104516 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 104575 || |||||| || ||||| | || || ||| || | || || ||| ||| || | Sbjct 45717 ACCAATGGTACTTCCAATGGTTTGATACCTATGGTTAGAGTTTTCAACAACACTGCCAGA 45776 Query 104576 TATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATG 104631 || || |||||| | || | |||| || | | || | || || || ||||| Sbjct 45777 TACGTTGATCAAGGT-GGTAACAAAAGACCTGGTGCCTTTGCTCTGTACCTAGAACCATG 45835 Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691 |||| | |||||| | || ||| | || | | || || ||| | || || | Sbjct 45836 GCACTCTGATATCTTTGATTTCATCGACATCAGAAAAAATCACGGTAAGGAAGA-AATCA 45894 Query 104692 GTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750 | || | ||| | ||| | ||| | |||||||| || | |||||||||||||| ||| Sbjct 45895 GAGCTAGAGATTTATTCCCAGCTTTATGGATTCCTGACTTGTTCATGAAGAGAGTCAAGG 45954 Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCACCTGGTCTCTCCGATGCCGTG 104809 | ||| ||||| || | || | ||| || || || |||||| | ||||| Sbjct 45955 CAAATGGTGATTGGACTTTATTCTCTCCTAGTGAA-GCTCCTGGTTTGAGTGATGCTTAT 46013 Query 104810 GGTGAGGAGTTTGAAGCCCTTTA-CACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGAC 104868 ||||| || |||||| || || || || ||||| ||||||| | | | ||| Sbjct 46014 GGTGATGACTTTGAAAAGCTATATGACCAA-TACGAATTAGAAGGTAGAGGTAGAAAGAC 46072 Query 104869 GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928 | ||| | | ||| | || || | | | |||||||| |||||||| || Sbjct 46073 CATCAAGGCTCAAAAGTTATGGTACGCCATCTTAGAAGCCCAAACCGAAACTGGTACTCC 46132 Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988 | ||| ||||||| || || ||||| |||| |||||||||||| |||||| || Sbjct 46133 TTTCATTGTTTACAAGGATGCTTGTAATAAAAAATCTAATCAAAAGAACTTGGGTACAAT 46192 Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 105048 || ||| || | ||| ||||| | |||| |||| | | || || ||||| Sbjct 46193 TAAATCTTCTAACTTATGTTGTGAAATTGTTGAATACTCAGATGATAAGGAAACTGCTGT 46252 Query 105049 GTGTAACCTCGCATCAATCGCTCTCCC---------CAAG---TATGTGGATCCAGAGAC 105096 |||||| | || || | || | || ||| | | |||| | |||| Sbjct 46253 TTGTAACTTAGCTTCTGTTGCCTTACCAGCCTTTGTAAAGGTCTCCGAAGATCAAAAGAC 46312 Query 105097 AAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAA 105156 | || | ||| | ||||||| ||||||||| || | | | || ||| |||| Sbjct 46313 TCAAACTTATGACTTCAAAAAACTTCACGAAGTTTGTAAGGTTATTGCTAAGAACTTAAA 46372 Query 105157 CAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACA 105216 | |||||||| ||||| | |||||| ||||| |||||| | | ||| || |||||||| Sbjct 46373 CGCTGTTATTGACAGAAACTATTACCCTGTTGAAACTGCTAGAAGATCCAACATGAGACA 46432 Query 105217 CCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGC 105276 | | || |||| | |||||||| ||| | || ||| || || | | | | Sbjct 46433 CAGACCTATTGCCGTAGGTGTTCAAGGTTTGGCTGATACTTTTATGATGTTAAGAGTTCC 46492 Query 105277 ATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGC 105336 ||| ||||| || |||| |||||| | || | || || || ||||| |||||||| Sbjct 46493 ATTCGATTCTGAAAAAGCCAAGGAATTGAACATTCAAATTTTCGAAACCATTTATCACGC 46552 Query 105337 CGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGG 105396 ||| | || || | || || || || |||| || | |||| | | || || Sbjct 46553 TGCTTTGGAAGCTTCCACTGAATTAGCTGAAATTGAAGGAACCTATGCTTCTTACGAAGG 46612 Query 105397 TTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA 105456 |||||||||||| ||||| || | |||| ||| | | |||| || |||| || | Sbjct 46613 TTCTCCAGCTTCTCAAGGTGTTTTACAATACGATTTCT-GGAACGTTGCTCCAA-CTACC 46670 Query 105457 CTACGACTGGGA-AGCTCTCAA-GGAACGC----ATCAAGGAGAAGGGTCTTCGTAACAG 105510 || ||||| | || || ||| || || || | ||| ||| | Sbjct 46671 TTA----TGGGATTGGACTGAATTGAAGGCTAAGATTGCCAAGCACGGT----TTAAGAA 46722 Query 105511 TCTCCTCA----TGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATG 105566 ||||| | | ||||| |||||||| || || || | ||||| || ||| | |||| Sbjct 46723 ACTCCTTATTGGTTGCTCCTATGCCAACTGCTTCTACTTCCCAAATTTTAGGTTACAATG 46782 Query 105567 AATGCTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTT 105625 |||| |||||||| | ||| | ||||| || ||| |||||||| | | || || | Sbjct 46783 AATGTTTTGAACCATTCACTTCTAACATGTACTCT-AGAAGAACTTTATCTGGTGAATAC 46841 Query 105626 GTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGAT 105685 ||||||||| | | || | || | || || ||| | ||| | | Sbjct 46842 CAAATTGTCAACCCATACTTATTGAAGGATTTAGTTGATATGGGTATTTGGGATGAAGCC 46901 Query 105686 ATGAAG---GATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCA 105742 |||||| || |||| | || |||||| || ||| | | | ||||| Sbjct 46902 ATGAAGTCTAATATCATTGCTAA---CAATGGTTCTATCCAACAATTACCAAACATTCCT 46958 Query 105743 AATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAA--ATCAAGATGAAGGATGTCATTG 105800 | ||||| ||| | ||||| || ||||||||| |||| | ||| | |||||| Sbjct 46959 CAAGAAATGAAGGATTTGTATAAAACTGTTTGGGAATTATCACAA--AAGACTATCATTG 47016 Query 105801 ACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAA---TCTCTTCA 105857 | ||||| || ||| | |||||||||||| ||| ||||| || ||| Sbjct 47017 ATATGGCTGCTGATAGACAAGCTTTCATTGATCAATCTCATTCCATGAACATTCATATCA 47076 Query 105858 TGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTC 105917 ||| ||||| ||| ||| | |||| |||||| | ||| |||||| |||||| Sbjct 47077 TGG---CCCCAACCATGGGTAAGTTAACTTCCATGCACTTCTACGGTTGGAGCAAGGGTT 47133 Query 105918 TCAAAACGGGGATGTATTAC 105937 | || || || ||||| ||| Sbjct 47134 TGAAGACTGGTATGTACTAC 47153 >seq13 Length=415809 Score = 100 bits (110), Expect = 3e-16 Identities = 213/312 (68%), Gaps = 11/312 (4%) Strand=Plus/Plus Query 9614 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9673 |||||||| | || ||||| |||||| | ||| ||| | ||||||||| | Sbjct 402965 AAACCATCTAGTTCGACCAAAATTTGGTTTAAAGTGGCTTCTCTTTCATCATTACC---- 403020 Query 9674 ATACCACCAGCACTGCGTTGCTTTCCCAC-GGCATCAATCTCATCAATGAAGACGATGCA 9732 ||||| ||||| | | ||||| ||| |||||| || ||||||||||| | ||| | Sbjct 403021 --ACCACTAGCACCTC-TGGCTTTACCAATGGCATCGATTTCATCAATGAAAATGATACT 403077 Query 9733 TGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAAC 9792 ||| ||||| | || |||||| ||||| | ||| | || |||| ||| || Sbjct 403078 TGGGGCATTTTTTCTGGCTGTTTCAAATAGATCTCTTACTCTGGAAGCACCCATACCTAC 403137 Query 9793 AAACATCTCCACAAAGTTTGCGGCGGAACATTGGAT-GAAGGGGACATTAGATTCACCCG 9851 ||||||||| ||||| | || | ||| | | || ||| || ||| | ||||| | Sbjct 403138 AAACATCTCAACAAATTCAGCACCAGAA-ACAGAATAGAATGGCACACCTGCCTCACCGG 403196 Query 9852 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTC 9911 || | || ||| | |||||||||||| |||||||| ||| | | | ||||||| Sbjct 403197 CAGTTGCCTTGGCCAAAAGAGTCTTACCTGTACCTGGAGGACCAGACAAAATAGCACCTC 403256 Query 9912 GTGG-AATCTTG 9922 || ||||||| Sbjct 403257 TAGGTAATCTTG 403268 >seq7 Length=316599 Score = 86.0 bits (94), Expect = 7e-12 Identities = 224/334 (67%), Gaps = 6/334 (2%) Strand=Plus/Plus Query 169171 ACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATACCG 169230 ||||||||| |||||||| || | ||| ||| ||||||||||| | | ||||||| | Sbjct 64375 ACCCTTGATATGGGAACCATCATAATCTTGATCAGTCATGATCATTAAATGACCATATCT 64434 Query 169231 AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATC 169290 | | ||||||| ||| ||| ||||| | ||||| || ||||||| | | Sbjct 64435 TAAAGAAGTAACATCTGTATAAGTCTTTTTATGTTGTAAACCCATAATTTTCTTGATAGC 64494 Query 169291 GTTGAA-CTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACATTCTTACAC- 169348 ||||| ||||| ||| ||| ||| |||| ||||| | ||||| | | || Sbjct 64495 -TTGAATTTCTTGATTTTTATTGACCTGATCAGCAGAAGCATCTCTGACATT-TAAGACT 64552 Query 169349 TTCCCACGAAGAGGGAAGACA-CCGTAGTGATCACGACCAACGACGGAGAGACCCGCGAC 169407 || || | | ||| | ||| ||||| | ||| | |||||| | || | ||| || || Sbjct 64553 TTACCTCTTAATGGGTA-ACATCCGTAATAATCTCTACCAACAATAGACAAACCAGCAAC 64611 Query 169408 TGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACATTTTCCAGATTGTGC 169467 || | | ||| || || ||||| || || | | | |||||||| | | | Sbjct 64612 AGCCAATGACTTGGCAGAATCACCTTCTGTTAATAGTAAAGTACATTTATGACCCTCTCT 64671 Query 169468 CGTACCCGCCTTGTTCGCATCATCCAATTTGGGA 169501 ||||| |||||||| ||||| || ||||| ||| Sbjct 64672 AGTACCGGCCTTGTTAGCATCTTCTAATTTAGGA 64705 >seq37 Length=227037 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/129 (75%), Gaps = 4/129 (3%) Strand=Plus/Plus Query 154116 TTGCGCCACGATCTGGTCTCGCTGTGAAACATGGTAT--CCAAGTTGGTGCGGGTGTTGT 154173 |||| ||| |||| ||| | || || || | ||||| ||| |||||| |||||||| Sbjct 145492 TTGCCCCAAGATCAGGTTTAGCCGTCAAGAACGGTATTTCCAC--TGGTGCCGGTGTTGT 145549 Query 154174 TGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTTTTCAATCACGGAGACAAAGACTT 154233 |||| || || || |||||||| ||||| ||| | ||||| || || || || ||||| Sbjct 145550 TGATAGAGATTATACCGGTGAAGTTAAAGTTGTTTTATTCAACCATGGTGAAAACGACTT 145609 Query 154234 TGAGGTAAA 154242 ||| ||||| Sbjct 145610 TGAAGTAAA 145618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260501078840