Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_028104.1
Length=73689
Score E
Sequences producing significant alignments: (Bits) Value
seq7 87.8 8e-13
>seq7
Length=316599
Score = 87.8 bits (96), Expect = 8e-13
Identities = 379/586 (65%), Gaps = 15/586 (3%)
Strand=Plus/Plus
Query 64876 AATGTCAGTACTAAATCCTGTGCCAATACCCTTTGAGCCATTTATTAAAATCATCGGAAT 64935
||| | |||||| | ||||| |||||||| | ||||| | |||||||| || ||
Sbjct 63460 AATATAAGTACTCCAACCTGTACCAATACCTTCACCACCATTGACCAAAATCATAGGTAT 63519
Query 64936 AATTGGTGCATAAAAGATAGGCTCAACAATGAGACCATCATCATCCAAATACTTCAAAAT 64995
| || ||||| | || |||| | | |||| || | || || ||||| |
Sbjct 63520 TACAGGAGCATACCACTCTGGTTCAATAGTCTTTTCATCTTCTTGTAAGTATTTCAATAA 63579
Query 64996 GGCATCATCCTCTTT-TGGAAATATAGAACGAGTTATTTTATTCAATTGAGTATAAATAT 65054
|| | || || || |||||| ||||| |||| ||||||||| || ||| ||||||
Sbjct 63580 AGCGTTGTCATCCTTGTGGAAA-ATAGATGAGGTTAGTTTATTCAAATGGGTAAAAATAT 63638
Query 65055 ATCTTTCGGATGCGTGGTCTT---GTCCAGTTCGTCGTGTTCCAAACTGACCATTTGGCA 65111
||||| | | || ||||| ||||| || || ||||| ||| |||||||
Sbjct 63639 ATCTTGCAGCAGCAGCGTCTTTACCACCAGTGGCTCTAGTACCAAAGGCACCCTTTGGCA 63698
Query 65112 TTAATAAATTAATATTGTTTGAACCAATAAAATTCTGAGCCATTCCGATAATTGCTGCAT 65171
| | | || || || || | ||||| ||||| || || | |||||||| | | |
Sbjct 63699 TCATCATATAGATGTTATTGGTACCAACAAAATCTTGGGCTAATCCGATAACAGTTTGAA 63758
Query 65172 TTAAACTCGCTTCACCGTGATGATATCCTGAATG--TTCAGAGACATATCCACTAAATTG 65229
|||| || ||||| ||||| || || | || ||||||| ||| | |||
Sbjct 63759 CTAAAGAAGCGTCACCATGATGGTA--CTCAGTGGCAGCAGAGACGTATTGAGCAAAGGT 63816
Query 65230 AGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAAATGCAGAATACAATA-TTTTCCGTA 65288
| ||| || || || | | ||| | ||| || ||| | | | | ||||| |
Sbjct 63817 GGAAACCTTCATATCTCTAACAACATTATGTTTTAAAGCACCAAAGATGACTTTTCTTTG 63876
Query 65289 AACTAATTTTCAATCCATCCATTAAATTAGGAATGCTTCTGTCACAATCATATTTTGAGA 65348
||| | ||| || |||||||| | ||||||||| |||| |||| ||| |
Sbjct 63877 AAC-AGGTTTGAAACCATCCATGACATTAGGAATAGATCTGATGTTATCAGCCAATGAAA 63935
Query 65349 AATGTATGAATTCTTTGTTAAT-AAATTCTTCATATGAAACACTCGTATTATCTGTATTC 65407
| || |||||||| ||||| |||| || ||| ||| || || | | | || |
Sbjct 63936 ATAAAATCAATTCTTTATTAATGAAATCTTTTATAGGAATAACATCTAGTGT-AGGATCC 63994
Query 65408 AAATAACTATCGCGATTATATTTTTCTAA-CCATTCTTTTCTATCA 65452
||| | || | | | || || ||||| ||||||||||||||||
Sbjct 63995 AAAAAGGTACCTGGTTCAT-GTTGTCTAAGCCATTCTTTTCTATCA 64039
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 235679882233650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |