Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq4 89.7 6e-13 >seq4 Length=144043 Score = 89.7 bits (98), Expect = 6e-13 Identities = 298/459 (65%), Gaps = 6/459 (1%) Strand=Plus/Plus Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302 || || ||| |||| ||| |||| |||||||| || || | ||||| || ||||| Sbjct 45486 GAAACTTACAACTTGATGTCTCAAAGATACTTTACCCATGCTTCTCCAACACTATTCAAT 45545 Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362 |||||||| ||||| ||||| || ||| | | | ||||||||||| || Sbjct 45546 GCTGGTACTCCAAGACCTCAAATGTCTTCTTGTTTCTTAATTTCTATGAAGGATGATTCT 45605 Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422 || ||||| ||||| || || | ||||| ||||| || || || ||| | |||||| Sbjct 45606 ATTGACGGTATCTATGATACCTTAAAGGAATGTGCTCAAATTTCTAAGACTGCCGGTGGT 45665 Query 53423 ATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481 || ||| | ||| | | | ||| || | | | ||| | || || || || || Sbjct 45666 ATTGGTTTACACATTCAC-AACATCAGATCCACTGGCTCTTACATTGCTGGTACCAATGG 45724 Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541 || |||| | | |||||| | | || ||||||||||| ||| | ||||| | Sbjct 45725 TACTTCCAATGGTTTGATACCTATGGTTAGAGTTTTCAACAACACTGCCAGATACGTTGA 45784 Query 53542 CCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGA 53601 || |||||| || | || | || || | ||||| || || |||||| | || Sbjct 45785 TCAAGGTGGTAACAAAAGACCTGGTGCCTTTGCTCTGTACCTAGAACCATGGCACTCTGA 45844 Query 53602 CATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGAT--GCGCTGCCGT 53659 || | || || |||| | | ||||| ||| | ||||| || | ||| | Sbjct 45845 TATCTTTGATTTCATCGACATCAGAAAAAATCACGGTAAGGAAGAAATCAGAGCT--AGA 45902 Query 53660 GACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATG 53698 || | || ||||| | |||||||| ||| | |||||| Sbjct 45903 GATTTATTCCCAGCTTTATGGATTCCTGACTTGTTCATG 45941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215719551800