Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1 131 1e-25 seq18 109 5e-19 >seq1 Length=1362551 Score = 131 bits (144), Expect = 1e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || ||||||||||| || || ||| | |||||| | || || ||| | || Sbjct 277602 ATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCTTCT 277543 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || || || || | || || ||||| |||||||||||||| || ||||| |||||| Sbjct 277542 GATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATTCCACCTGATCAA 277483 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | ||||| | ||| || || ||||| ||||| || || | || || |||||| Sbjct 277482 CAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTACAAC 277423 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 |||||||| || || || ||||| || || || Sbjct 277422 ATTCAAAAAGAATCCACTTTACACTTAGTCTT 277391 >seq18 Length=128875 Score = 109 bits (120), Expect = 5e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 ||||| || || | ||||| ||| | || ||| | ||||| ||| | | || | ||| Sbjct 90817 TTTGTCAAGACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTGCTGAAACTATT 90876 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || ||||| || || |||||||| ||||| || ||||| |||||||| | ||| Sbjct 90877 GACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTA 90936 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | || || |||||||| |||||| || ||| | || ||||||||||| ||||| Sbjct 90937 ATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAACATCCAAAAA 90996 Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || || |||| || ||| | | ||| | ||||| Sbjct 90997 GAATCTACTCTACACTTAGTTCTAAGATTGAGAGGTGG 91034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918177104320