Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1 165 2e-35 seq18 150 4e-31 seq6 96.9 8e-15 >seq1 Length=1362551 Score = 165 bits (182), Expect = 2e-35 Identities = 168/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| | ||| | ||| | ||||||||||||||| | ||||| || | |||||||| || Sbjct 277387 TCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGATAAAGTTCTACC 277446 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||||| ||||| ||||||||||| | || |||||| || || ||||||||||| || Sbjct 277447 ATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCTTT 277506 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||||||||| || ||| ||| ||||| | || || | ||| || || || || || Sbjct 277507 GTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGACCTCCAAAGTAAT 277566 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| || || | |||||||| ||| | ||||||||| Sbjct 277567 GGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTTT 277605 >seq18 Length=128875 Score = 150 bits (166), Expect = 4e-31 Identities = 154/201 (77%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| || || | ||| ||||| ||||||||||||| |||||||| | || ||||| || Sbjct 91023 TCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAGATAAGGTTCTACC 90964 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||||| || || ||||| ||||| | || |||||| || || |||||||||||||| Sbjct 90963 GTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTT 90904 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||||||| ||| ||||| || || || || | | ||| || || || ||||| Sbjct 90903 GTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATTCGACTTCCAAAGTGAT 90844 Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698 ||||| || || || || || Sbjct 90843 GGTCTTACCGGTTAAGGTCTT 90823 >seq6 Length=235108 Score = 96.9 bits (106), Expect = 8e-15 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| |||||||||||||| || || ||||| || || || |||||||| ||||||||||| Sbjct 61349 GAAAATTTGACCATCAGTGATGGAAATAACGTTAGTTGGAATATAAGCGGAAACATCACC 61290 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAATT 4580 |||| ||||| | ||| ||||| || || | || |||||||| || || Sbjct 61289 ACCTTGGGTTTCAATAACTGGTAAAGCAGTCATGGAACCACCACCTAATTT 61239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530573548454