Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq13 295 6e-75
>seq13
Length=415809
Score = 295 bits (326), Expect = 6e-75
Identities = 594/865 (69%), Gaps = 17/865 (2%)
Strand=Plus/Plus
Query 4235 GGACTTTGAACAAACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGT 4294
|||||| | | ||||||| ||||| || || || |||| |||||| |||||||| ||
Sbjct 173012 GGACTTGGCAATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGT 173071
Query 4295 TTTGCCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT 4354
|| || |||| || || ||||||||||| || || || || || | ||| | | ||
Sbjct 173072 CTTACCAGCTAAGGATATGTTTTCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTT 173131
Query 4355 TTC-ACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGA 4413
||| || | || || || | |||| ||||| |||||||| | ||| ||| |||| |
Sbjct 173132 TTCGTTACCTAAG-GCAACTAATAATCTATCAGCAACAAATTCAACATATTGGTTCATTA 173190
Query 4414 GTTC-GCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAA--AACTCTTGTT 4470
| || ||| || || |||| |||| || || | || | |||| | ||||| ||
Sbjct 173191 GATCAGCA-TTCATACCAAGTAATGCAACTGGAATGGCAT-CAACAAAGTATCTCTT-TT 173247
Query 4471 CTATAGTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGA--TGGTTTATTTAC 4528
| || || ||||| | || || ||||| | | |||||| || |||||| ||
Sbjct 173248 CAATTTCAACAGCTTCAGCAATAAT-TCTTTCA-ATGATCTTTGGATCTGGTTTGTTCTT 173305
Query 4529 TAAGTATCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAG 4588
||||| ||||||| ||| ||||| ||| ||| |||||||| ||||| | ||||
Sbjct 173306 TAAGTGGGAGAACAATAGACAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAA 173365
Query 4589 TTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGC 4648
|||||| || || || || || ||||| ||||| | || || | ||| || ||||| ||
Sbjct 173366 TTCGTTGGAGAAAGTCAAACCAGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGC 173425
Query 4649 AAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAA 4708
|||||| ||||| || || | ||||| || || ||||| || || | || | ||
Sbjct 173426 AAATGAACCAGAGAAAAAGACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAA 173485
Query 4709 CGAGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGG 4768
| | | | || |||| ||||||| | | ||||| | ||| |||| ||||| ||
Sbjct 173486 CAAAGCGTCCTTATCTTGAATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGG 173545
Query 4769 AATTGTGTATATAGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTC 4828
||| || | ||||||||| ||||| | ||||| ||| || | || || |||||
Sbjct 173546 AATAGTTTCTATAGCGTTTAATAAGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTC 173605
Query 4829 TATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAA 4888
|| || || ||| ||||||| || || ||||| || ||| || || ||||| ||
Sbjct 173606 TAATAATAAAGAATAAGTTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAA 173665
Query 4889 GCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTAC 4948
|| ||||||||| | ||||||||| | | || |||| || |||||||| || ||
Sbjct 173666 ACACTTAGCTTCTGGAATTTGAACTTCAGCAGAGAAATTTTCAACCAAGTTTTCATTGAC 173725
Query 4949 TATACCGTCACTGGCTGCAAAAAACGCCAAAA--CATGAGATATAAAGTACTGT--TCGT 5004
||||| ||| || ||||| || ||||| | | ||| || ||| | || | | |
Sbjct 173726 AATACCATCAGAAGCAGCAAAGAAAGCCAAGACTCTTGAAATGAAAAAT-CTTTCATTTT 173784
Query 5005 CAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCC 5064
|| | | || ||||| | | | ||||| |||| ||||| | ||||||| | ||||
Sbjct 173785 CATTCATTCTGTTATTCCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCC 173844
Query 5065 AAAACGACGCTTCCGCTTTTTTGTA 5089
| || || ||||| ||| | || ||
Sbjct 173845 AGAAAGAAGCTTCGGCTCTCTTATA 173869
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049386608653
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |