Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq4 632 3e-176 seq13 212 9e-50 >seq4 Length=144043 Score = 632 bits (700), Expect = 3e-176 Identities = 1508/2258 (67%), Gaps = 45/2258 (2%) Strand=Plus/Minus Query 76821 TAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTG 76880 |||||||||||||| || | |||| ||||| |||||||| |||||| || | || Sbjct 47152 TAGTACATACCAGTCTTCAAACCCTTGCTCCAACCGTAGAAGTGCATGGAAGTTAACTTA 47093 Query 76881 GAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCT 76940 | || | |||||||| ||||| || ||| |||||| ||||||||| | Sbjct 47092 CCCATGGTTGGGGCCATGATATGAATGTTCATGGAATGAGATTGATCAATGAAAGCTTGT 47033 Query 76941 CTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACT 77000 |||||||| ||||| | || || |||||||| | | |||||||| |||||| | | Sbjct 47032 CTATCAGCAGCCATATCAATGATAGTCTTTTGTGATAATTCCCAAACAGTTTTATACAAA 46973 Query 77001 TGTTTGATATCATCTGGAAGGTTTGT--ATT-TTGAATGGAACCACCATCTGATATAATT 77057 | || || || | |||| ||||| ||| ||| || |||||| | | || || Sbjct 46972 TCCTTCATTTCTTGAGGAATGTTTGGTAATTGTTGGATAGAACCATTGTTAGCAATGATA 46913 Query 77058 GTATTCTTTATATCATCATTCCACAATTTCC-TCTCTGTTAAAACTCTAAGGAGATGAGG 77116 || ||| || | |||| ||| ||| || | || |||| | | | | | || Sbjct 46912 TTAGACTTCATGGCTTCATCCCA-AATACCCATATCAACTAAATCCTTCAATAAGTATGG 46854 Query 77117 ATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGG 77176 || || ||||| |||| ||||| || ||| | || ||| || ||| || |||| Sbjct 46853 GTTGACAATTTGGTATTCACCAGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGG 46794 Query 77177 TTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCAC 77236 ||| | | ||||||||| || |||||||| | ||||||||||||||||||||| || || Sbjct 46793 TTCAAAACATTCATTGTAACCTAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAAC 46734 Query 77237 CAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCA 77296 |||||| ||||| | ||| || | || ||| | || | | |||||||||| Sbjct 46733 CAATAAGGAGTTTCTTAAACCGTGCTTGGCAATCTTAGCCTTCAATTCAGTCCAATCCCA 46674 Query 77297 -AAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATG 77355 ||| | | || |||| | ||| | ||||||||||| || || | | ||| | Sbjct 46673 TAAGGTA-GTTGGAGCAACGTTCCAGAAATCGTATTGTAAAACACCTTGAGAAGCTGGAG 46615 Query 77356 ATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATG 77415 | || | || | |||| | |||||| ||||||||| |||| |||||||| | Sbjct 46614 AACCTTCGTAAGAAGCATAGGTTCCTTCAATTTCAGCTAATTCAGTGGAAGCTTCCAAAG 46555 Query 77416 CTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAA 77475 | ||| |||||| ||||||||||| | | || | || | |||| | ||| | Sbjct 46554 CAGCGTGATAAATGGTTTCGAAAATTTGAATGTTCAATTCCTTGGCTTTTTCAGAATCGA 46495 Query 77476 ACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTC 77535 | ||| ||| | ||||| | ||| || || || ||||| || | ||||||||| Sbjct 46494 ATGGAACTCTTAACATCATAAAAGTATCAGCCAAACCTTGAACACCTACGGCAATAGGTC 46435 Query 77536 TATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTT 77595 | |||||| | ||||| || |||| | || ||| ||||| || |||| |||| Sbjct 46434 TGTGTCTCATGTTGGATCTTCTAGCAGTTTCAACAGGGTAATAGTTTCTGTCAATAACAG 46375 Query 77596 TATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTC 77655 || | || || ||| || ||| || || | ||||| || ||| | || Sbjct 46374 CGTTTAAGTTCTTAGCAATAACCTTACAAACTTCGTGAAGTTTTTTGAAGTCATAAGTTT 46315 Query 77656 CA-TCTAT--AAC-----AAACATGTTCAAAG----------CTATAGATGCTAGATTAC 77697 | ||| | | | | || | | ||||| | | ||| |||| |||| Sbjct 46314 GAGTCTTTTGATCTTCGGAGACCTTTACAAAGGCTGGTAAGGCAACAGAAGCTAAGTTAC 46255 Query 77698 AAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATT 77757 |||| || || ||| | | | |||| | || || ||||| ||| | ||| Sbjct 46254 AAACAGCAGTTTCCTTATCATCTGAGTATTCAACAATTTCACAACATAAGTTAGAAGATT 46195 Query 77758 TGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAA 77817 | || || |||| || | ||| || |||||||| || | ||||| |||| ||| | Sbjct 46194 TAATTGTACCCAAGTTCTTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGA 46135 Query 77818 ACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTT 77875 | ||||| || ||||| | || | ||| | || | | ||| | ||| | ||| || Sbjct 46134 AAGGAGTACCAGTTTCGGTTTGGGCTTCTAAGATGGCGTACCATA--ACTTTTGAGCCTT 46077 Query 77876 TATCATAGATTTGTATCGCCTCTCTCT--TTCATATTGAGTATATAGCCGTTCAAATTCA 77933 || | ||| || | | | ||| ||| ||||| ||||||| |||||| ||| Sbjct 46076 GATGGTC--TTTCTACCTCTACCTTCTAATTCGTATTGGTCATATAGCTTTTCAAAGTCA 46019 Query 77934 TCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCA 77993 || || || ||||| ||| ||||| |||| | || | | || | ||| |||||| Sbjct 46018 TCACCATAAGCATCACTCAAACCAGGAGCTTCACTAGGAGAGAATAAAGTCCAATCACCA 45959 Query 77994 TCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGG 78053 | | |||| |||| ||||| || | ||||| ||||||| ||| |||| ||||| Sbjct 45958 TTTGCCTTGACTCTCTTCATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTA 45899 Query 78054 GTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAA 78113 | ||| |||||| || || ||| ||| | | |||| || || | |||||||| Sbjct 45898 GCTCTGATTTCTTCCTTACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAG 45839 Query 78114 TGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATA 78173 |||||||||||||| || | || | | ||||||| ||| ||||| || ||||| | Sbjct 45838 TGCCATGGTTCTAGGTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACG 45779 Query 78174 TATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTT 78233 |||||||| ||||| || ||||||| | ||| || || | ||| || || || ||||| Sbjct 45778 TATCTGGCAGTGTTGTTGAAAACTCTAACCATAGGTATCAAACCATTGGAAGTACCATTG 45719 Query 78234 GTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCT 78293 || |||| ||| ||| ||| | | | || || |||| || || || || || Sbjct 45718 GTACCAGCAATGTAAGAGCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCG 45659 Query 78294 GCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCA 78353 || ||||||| ||| |||| || || || ||||| |||||||| || ||| ||| Sbjct 45658 GCAGTCTTAGAAATTTGAGCACATTCCTTTAAGGTATCATAGATACCGTCAATAGAATCA 45599 Query 78354 TCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAAT 78413 ||| |||| || | ||||| |||||||||| | ||| || ||||| ||| Sbjct 45598 TCCTTCATAGAAATTAAGAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAAT 45539 Query 78414 AATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCT 78473 | ||| ||||| ||||| ||||| || ||| ||| | | ||||| ||||| || || Sbjct 45538 AGTGTTGGAGAAGCATGGGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACT 45479 Query 78474 GATTCTATG-TCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCT 78532 ||| ||| | || | || || || || || || | ||| | || ||| || ||||| Sbjct 45478 TTTTCAATGTTTTCACCG-TGGATACCAACAGCAACTCTCATAATCAAATGTTGTGGTCT 45420 Query 78533 TTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAA 78592 |||||| ||||| ||| || ||||| ||||||||| ||||||| || || |||||||| Sbjct 45419 TTCAACGATCTTACCATTGATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAA 45360 Query 78593 ATAGTTGTA--TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTAT 78650 ||||||||| ||||| ||||| ||| | |||||| || || || ||||||||| | Sbjct 45359 ATAGTTGTAGTTGAAA--TCTCTATCGAAGATAATAGTAGCATCTAAGGTATCTTTGTGT 45302 Query 78651 TTGGTAACAATATCCATGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGA 78710 || |||| | | ||| | ||||| || ||||| ||||||||| | Sbjct 45301 TTCATAACGGTTTTGTAAACATCATCAGAAATCATTGGAGACAAAACACCATTTCTTTCG 45242 Query 78711 TTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGT 78770 ||||| ||||| |||| ||||| || || | | ||||| |||||| |||| ||||||| Sbjct 45241 TTAACGTAGTTGTATAAGTCTTCGATAACTTGAGAAAATAATTTTTTGGTTTGCTTGTGT 45182 Query 78771 AGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAA 78830 | ||| | || ||||| || || |||| ||||||||||||||| || || || Sbjct 45181 AAGTTACTGATGGCGATTCTGGCGGCAAGAACAGCATAATCAGGATGAACAGTGGT-CAT 45123 Query 78831 GT-GGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAG 78889 || ||| |||| || ||||| ||||||| || || || || || || | || | Sbjct 45122 GTAGGCACAAGTTTCAGCGGCTAAGTTATCTAATTCGATGGTAGTAACACCTTCGTAGAC 45063 Query 78890 TCCTTGAATAACTTTCATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATA 78949 || |||| | | || ||||||||||||||| | | | || | |||||||| Sbjct 45062 ACCGGAGATAATTCTTTGGGTGATTTTGACAGGATCGATATGTTTAGCATCTAATCCATA 45003 Query 78950 ACATAATTTTCTAATACGAGATGTGATTTTATCAAATATAACATTCTCCTTGCATCCATT 79009 |||||| | ||| | ||||| |||||||||||| ||| | || | ||| | Sbjct 45002 GCATAATCTAGCAATTCTGGATGTAATTTTATCAAATTGAACTGGAACTTTTCTTCCGTC 44943 Query 79010 TCGTTTAATAACGAACATCGTTTGGTATAATAGAAATT 79047 || ||||| ||| ||||| ||| ||||| ||| ||| Sbjct 44942 TCTTTTAACAACAAACAT-GTT---TATAAAAGATATT 44909 >seq13 Length=415809 Score = 212 bits (234), Expect = 9e-50 Identities = 407/599 (68%), Gaps = 6/599 (1%) Strand=Plus/Plus Query 48132 AACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAA 48191 |||| || ||| ||||| ||| ||| | |||||||||||||| || |||||||| || Sbjct 173316 AACAATAGACAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAG 173375 Query 48192 AATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCA 48251 || || | ||| ||||| | || ||| || | ||| || || || || || || ||| Sbjct 173376 AAAGTCAAACCAGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCA 173435 Query 48252 GAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCG 48311 || || || | ||||| || || ||||| || ||||| || | | || || Sbjct 173436 GAGAAAAAGACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCC 173495 Query 48312 TTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCT 48368 || | | ||||| | ||||| |||||||| | ||| | ||| || |||||| Sbjct 173496 TTATCTTGAATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCT 173555 Query 48369 ATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGA 48428 ||||| || || | || | ||||| || ||| || | ||| || |||| ||| | | Sbjct 173556 ATAGCGTTTAATAAGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAA 173615 Query 48429 CTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCT 48488 ||| |||| |||||||| ||||| || || || || ||||| ||||| | ||| Sbjct 173616 GAATAAGTTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCT 173675 Query 48489 TCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCA 48548 |||| || || || || | | | || |||| |||| || ||||| || || |||||| Sbjct 173676 TCTGGAATTTGAACTTCAGCAGAGAAATTTTCAACCAAGTTTTCATTGACAATACCATCA 173735 Query 48549 CTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGT--- 48605 ||||||||| || || || || | ||| ||| || |||| || | ||| | Sbjct 173736 GAAGCAGCAAAGAAAGCCAAGACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTG 173795 Query 48606 TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCC 48665 |||||||| || | | ||| || || | ||| | ||||||||| ||||| || || || Sbjct 173796 TTATTCCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCT 173855 Query 48666 TCTGCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATCT 48724 || ||| | ||||| | ||| || || | ||| |||||||| | ||| ||||| Sbjct 173856 TCGGCTCTCTTATAGGCTTCCCAAATTTCTGGGAATTTAATTGGGAATAAAACGAATCT 173914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668443982240