Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq4 542 4e-149 seq13 230 3e-55 >seq4 Length=144043 Score = 542 bits (600), Expect = 4e-149 Identities = 1479/2240 (66%), Gaps = 51/2240 (2%) Strand=Plus/Minus Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436 ||||| ||||| | | || || | || ||| | | |||||||||||||| || | | Sbjct 47191 GTGAATTGAATAGCGGCTGAGGCAGCTTGTGTTCTCAAGTAGTACATACCAGTCTTCAAA 47132 Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496 ||| ||||| |||||||| |||||| |||| || | || | ||| Sbjct 47131 CCCTTGCTCCAACCGTAGAAGTGCATGGAAGTTAACTTACCCATGGTTGGGGCCATGATA 47072 Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556 ||||| ||||| || ||| |||||| ||||||||| ||||||||| ||||| | || Sbjct 47071 TGAATGTTCATGGAATGAGATTGATCAATGAAAGCTTGTCTATCAGCAGCCATATCAATG 47012 Query 75557 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGA 75616 || |||||||| | | |||||||| |||||| | | | || || || | |||| Sbjct 47011 ATAGTCTTTTGTGATAATTCCCAAACAGTTTTATACAAATCCTTCATTTCTTGAGGAATG 46952 Query 75617 TTTGT--ATT-TTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTC 75673 |||| ||| ||| || || || | || || || || ||| || | |||| | Sbjct 46951 TTTGGTAATTGTTGGATAGAACCATTGTTAGCAATGATATTAGACTTCATGGCTTCATCC 46892 Query 75674 CACAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCC 75732 || ||| | | || |||| | | | | | || || |||||||| |||| || Sbjct 46891 CA-AATACCCATATCAACTAAATCCTTCAATAAGTATGGGTTGACAATTTGGTATTCACC 46833 Query 75733 AGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCC 75792 ||| || ||||| || ||| || ||| || ||||||| | | ||||||||| || Sbjct 46832 AGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGGTTCAAAACATTCATTGTAACC 46773 Query 75793 CAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACC 75852 |||||||| | ||| |||||||| |||||||| || |||||||| ||||| | ||| Sbjct 46772 TAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAAACC 46713 Query 75853 ATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCA-AAGATCTGATGGTACAACAT 75911 || | || ||| | || | | |||||||||| ||| | | ||| |||| | Sbjct 46712 GTGCTTGGCAATCTTAGCCTTCAATTCAGTCCAATCCCATAAGGTA-GTTGGAGCAACGT 46654 Query 75912 CCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAG 75971 ||||| ||||||||||| || || | ||| || || | || | | || | Sbjct 46653 TCCAGAAATCGTATTGTAAAACACCTTGAGAAGCTGGAGAACCTTCGTAAGAAGCATAGG 46594 Query 75972 TCCCGTCCTTTTCAGCTAGTTC---GCAACTCGCCTCTAACGCACCGTAATAAATTGTTT 76028 | || || ||||||||| ||| | || || || || ||| ||| |||||| |||| Sbjct 46593 TTCCTTCAATTTCAGCTAATTCAGTGGAA---GCTTCCAAAGCAGCGTGATAAATGGTTT 46537 Query 76029 CGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAA 76088 ||||||| | | || | || | |||| | ||| || ||| ||| | | Sbjct 46536 CGAAAATTTGAATGTTCAATTCCTTGGCTTTTTCAGAATCGAATGGAACTCTTAACATCA 46477 Query 76089 TAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAA 76148 |||| | ||| || | || ||||| || | |||||||||| |||||| | ||||| Sbjct 46476 TAAAAGTATCAGCCAAACCTTGAACACCTACGGCAATAGGTCTGTGTCTCATGTTGGATC 46417 Query 76149 TTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGA-CA 76207 || ||| | || ||||||||| || | || |||| || | | |||| | || Sbjct 46416 TTCTAGCAGTTTCAACAGGGTAATAGTTTCTGTCAATAACAGCGTTTA-AGTTCTTAGCA 46358 Query 76208 ACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCA-AATTTTCCATCT----ATC---- 76258 | || ||| || || | ||||| || ||| || ||| ||| ||| Sbjct 46357 ATAACCTTACAAACTTCGTGAAGTTTTTTGAAGTCATAAGTTTGAGTCTTTTGATCTTCG 46298 Query 76259 ---------ACAAACA-TATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATT 76308 ||||| | |||| || | ||| |||| |||||||| || || || Sbjct 46297 GAGACCTTTACAAAGGCTGGTAAG-GCAACAGAAGCTAAGTTACAAACAGCAGTTTCCTT 46239 Query 76309 AGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATT 76368 | ||| | |||| | || || |||| ||| | | || || || || | || Sbjct 46238 ATCATCTGAGTATTCAACAATTTCACAACATAAGTTAGAAGATTTAATTGTACCCAAGTT 46179 Query 76369 TTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTC 76428 | ||| || ||||| ||||| | ||||| |||| || || ||||| |||||||| Sbjct 46178 CTTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAAGGAGTACCAGTTTC 46119 Query 76429 AATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATTATAGATTTGTAT 76486 | || | ||| | || | | ||| | ||| | ||| || || | ||| || Sbjct 46118 GGTTTGGGCTTCTAAGATGGCGTACCATA--ACTTTTGAGCCTTGATGGTC--TTTCTAC 46063 Query 76487 CGCTTCTCTCT--TTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCAT 76544 | || | ||| ||| ||||| ||||| | |||||| ||||| || || ||||| Sbjct 46062 CTCTACCTTCTAATTCGTATTGGTCATATAGCTTTTCAAAGTCATCACCATAAGCATCAC 46003 Query 76545 CCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTT 76604 |||||||||| |||| | ||| | | || | ||| ||||||| | |||| || | | Sbjct 46002 TCAAACCAGGAGCTTCACTAGGAGAGAATAAAGTCCAATCACCATTTGCCTTGACTCTCT 45943 Query 76605 TCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCAT 76664 |||| || | ||||| ||||||| ||| |||| ||||| | ||| |||||| | Sbjct 45942 TCATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCTTCCT 45883 Query 76665 TTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGAT 76724 | || ||| ||| | | || | ||| || | |||||||| |||||||||||||| | Sbjct 45882 TACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCCATGGTTCTAGGT 45823 Query 76725 ATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTAT 76784 | | || | |||| |||| ||| ||||| || ||||| | |||||||||||||| | Sbjct 45822 ACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACGTATCTGGCAGTGTTGT 45763 Query 76785 TATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAAC 76844 | ||||||| | ||| || || | || || || |||||||| || |||| ||| ||| Sbjct 45762 TGAAAACTCTAACCATAGGTATCAAACCATTGGAAGTACCATTGGTACCAGCAATGTAAG 45703 Query 76845 TTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTA 76904 ||| | | || || ||| || || || || || || | ||||| ||| Sbjct 45702 AGCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCGGCAGTCTTAGAAATTT 45643 Query 76905 GAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAA 76964 ||||||| || || || |||||||| || || ||| ||||||| |||| || | Sbjct 45642 GAGCACATTCCTTTAAGGTATCATAGATACCGTCAATAGAATCATCCTTCATAGAAATTA 45583 Query 76965 GAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCAT 77024 ||||| |||||||||| | ||| || ||||| || | ||| ||||| |||| Sbjct 45582 AGAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAAGCAT 45523 Query 77025 GAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTAT-ATCCCAT 77083 | || || || ||| ||| | | ||||| ||||| || ||| ||| || | || Sbjct 45522 GGGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTTCAATGTTTTCAC 45463 Query 77084 TGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTA 77143 | || || || ||||| || | ||| | || ||| || |||| ||| || ||||| | Sbjct 45462 CG-TGGATACCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTTCAACGATCTTACCA 45404 Query 77144 TTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 77201 || || ||||| ||||||||| ||||||| || || ||||||||||||||||| ||||| Sbjct 45403 TTGATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAGTTGAAA 45344 Query 77202 AGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATCCA 77261 ||||| ||| | |||||| | || || | || || | ||| |||| | | Sbjct 45343 --TCTCTATCGAAGATAATAGTAGCATCTAAGGTATCTTTGTGTTTCATAACGGTTTTGT 45286 Query 77262 TGACAGTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAATA 77321 ||| |||||| |||||||| | |||||| | ||||| ||||| ||| Sbjct 45285 AAACATCATCAGAAATCATTGGAGACAAAACACCATTTCTTTCGTTAACGTAGTTGTATA 45226 Query 77322 AGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTA 77381 ||||||| || || | ||||| |||||| |||| |||||||| || | ||| | Sbjct 45225 AGTCTTCGATAACTTGAGAAAATAATTTTTTGGTTTGCTTGTGTAAGTTACTGATGGCGA 45166 Query 77382 TTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGT-GGCTGCTATTTCT 77440 |||| || || |||| ||||| |||||||| || || || || ||| |||| Sbjct 45165 TTCTGGCGGCAAGAACAGCATAATCAGGATGAACAGTGGT-CATGTAGGCACAAGTTTCA 45107 Query 77441 GCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTC 77500 || ||||| |||||||||| || |||||||| || | || | || |||| | | Sbjct 45106 GCGGCTAAGTTATCTAATTCGATGGTAGTAACACCTTCGTAGACACCGGAGATAATTCTT 45047 Query 77501 ATGGCTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAATTTTCTAATA 77560 || ||||||| |||||| | | | | | || ||||| |||||| | ||| Sbjct 45046 TGGGTGATTTTGACAGGATCGATATGTTTAGCATCTAATCCATAGCATAATCTAGCAATT 44987 Query 77561 CGAGATGTGATTTTATCAAA 77580 | ||||| ||||||||||| Sbjct 44986 CTGGATGTAATTTTATCAAA 44967 >seq13 Length=415809 Score = 230 bits (254), Expect = 3e-55 Identities = 384/554 (69%), Gaps = 6/554 (1%) Strand=Plus/Plus Query 46621 AACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAA 46680 |||| || ||| ||||| ||| ||| | ||||||||||||| || |||||||| || Sbjct 173316 AACAATAGACAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAG 173375 Query 46681 AATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCA 46740 || || | |||||||| | || || || | ||| || ||||| || || || ||| Sbjct 173376 AAAGTCAAACCAGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCA 173435 Query 46741 GAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCA 46800 || || || | ||||| ||||| || || || || ||||| || | | || || Sbjct 173436 GAGAAAAAGACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCC 173495 Query 46801 TTAT---GAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCT 46857 |||| ||||||| || |||||| |||||||||| ||| | ||| || |||||| Sbjct 173496 TTATCTTGAATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCT 173555 Query 46858 ATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGA 46917 ||||| || || | || | ||||| | ||| || | ||||| |||| ||| | | Sbjct 173556 ATAGCGTTTAATAAGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAA 173615 Query 46918 CTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCT 46977 ||| |||| || ||||||||||| || || || || ||||| ||||| | ||| Sbjct 173616 GAATAAGTTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCT 173675 Query 46978 TCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCA 47037 || | ||| || || || | | | || |||| ||| || ||||| || || |||||| Sbjct 173676 TCTGGAATTTGAACTTCAGCAGAGAAATTTTCAACCAAGTTTTCATTGACAATACCATCA 173735 Query 47038 CTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGT--- 47094 ||||||||| || ||||| || | ||| ||| || |||||| | ||| | Sbjct 173736 GAAGCAGCAAAGAAAGCCAAGACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTG 173795 Query 47095 TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCC 47154 |||||||| || | | ||| || || | ||| | ||||||||| |||||||| || || Sbjct 173796 TTATTCCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCT 173855 Query 47155 TCTGCTTTTTTATA 47168 || ||| | ||||| Sbjct 173856 TCGGCTCTCTTATA 173869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934034621120