Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq1 127 3e-24
>seq1
Length=1362551
Score = 127 bits (140), Expect = 3e-24
Identities = 319/477 (67%), Gaps = 26/477 (5%)
Strand=Plus/Plus
Query 50443 TAGATCGTTTAGGATTTAATTACAGAAACAAAGGAGATTTAGGACCTGTTTACGGTTTTC 50502
||||| | | || || | | ||||| | |||| |||||||| |||||||| ||||| |
Sbjct 1128453 TAGATTCTCTTGGGTTAACTGACAGAGAAGAAGGTGATTTAGGTCCTGTTTATGGTTTCC 1128512
Query 50503 AATGGAGACATTTTGGAGCGCGTTACATAAATTGCGACGTAAATTACGAAGGTCAAGGCG 50562
|||||||||||||||| || || | |||| || | ||| | ||||
Sbjct 1128513 AATGGAGACATTTTGGTGCTGAATATGTTGATTGTCACACTGACTACACAAACAAAGGAT 1128572
Query 50563 TGGATCAACT--GCAAAA-AATT-ATAACGACGTTGAAAACAAACCCCGACGATCGGCGT 50618
|||||| | || | | |||| |||| |||||| || || || ||||| | |
Sbjct 1128573 ACGATCAATTAAGCGATATAATTCATAA----GTTGAAGACCAATCCTTACGATAGAAGA 1128628
Query 50619 ATTTTAATGACCGCCTGGAATCCAACCGATATAGATCAAACCGTTTTACCTCCGTGTCAT 50678
|| | ||| | || ||||||||| | || | | ||| | | | || || || ||
Sbjct 1128629 ATCATCATGTCTGCTTGGAATCCACCAGACTTTAAGAAAATGGCTCTTCCGCCATGCCAC 1128688
Query 50679 GTTTTATGTCAATTTTATG---------CCACAGAC--AATGTTTTATCCTGTCA---AT 50724
||||| |||||||| |||| | | |||| || | | | ||||| ||
Sbjct 1128689 GTTTTCTGTCAATTCTATGTTTCTTTCCCTAAAGACCAAAAGCCTCAAT-TGTCATGTAT 1128747
Query 50725 GTTAT--CAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTAGCTTCTTACGC 50782
|||| |||||||| ||||||||| || || |||||||||||| | |||||||| ||
Sbjct 1128748 CTTATACCAAAGATCTTGTGATATGGGGTTGGGTGTTCCTTTCAACATTGCTTCTTATGC 1128807
Query 50783 TTTATTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGGGAGAATTTATTCATAC 50842
||| || || |||| || | | || |||||| | || ||||||||||| ||
Sbjct 1128808 TTTGTTGACCAGAATGATTGCAAAGGTTGTTGATATGGATTGTGGTGAATTTATTCACAC 1128867
Query 50843 GTTAGGAGACGCTCATATTTACCTCGATCACGTCGATGCTTT-AAAGGAGCAATTGA 50898
| || || ||||| ||||| ||||| || |||||||| |||| | ||||||
Sbjct 1128868 CATGGGTGATGCTCACGTTTACAAGGATCATGTAGATGCTTTGAAAGAACAAATTGA 1128924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 667074858123960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |