Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1 147 2e-30 >seq1 Length=1289090 Score = 147 bits (162), Expect = 2e-30 Identities = 578/893 (65%), Gaps = 29/893 (3%) Strand=Plus/Minus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 |||| ||||| ||| | ||||| || || || || || || ||| ||||| || | Sbjct 688536 TTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTTT 688477 Query 16734 CCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791 |||| || || || || || || | |||| | |||| | |||| || | | | Sbjct 688476 CCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGT-TACCTAAGG-CAACTAA 688419 Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTC-GCAGTTCATTCCTA-TA 16849 ||||||||| || |||||||| | ||||||| ||||| || ||| ||||| || | || Sbjct 688418 TAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCA-TTCATACCAAGTA 688360 Query 16850 AGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATA 16909 | | || |||| || || || ||| | || || |||| ||||| |||| Sbjct 688359 ATGCA-ACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAGCTTCAGCAATA 688301 Query 16910 ATACTAGCAACTCGTTCCTCGGAC--GG--TGTATGTTTAAGATGTTTAAACATCAGACA 16965 || || ||| | || | ||| || ||| | |||||| || |||| ||||| Sbjct 688300 ATTCTTTCAAT--GATCTTTGGATCTGGCTTGT-TCTTTAAG-TGRGAGAACAATAGACA 688245 Query 16966 TGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCC 17025 || || || |||||| || || ||||| | ||| | |||||| || || ||||| || Sbjct 688244 GGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACC 688185 Query 17026 GGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATAT 17085 |||||| || |||||| ||||| || || || || || || ||||| || || | Sbjct 688184 AGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGAC 688125 Query 17086 ACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAAT 17145 ||| || || | ||||| || | | || ||| || || ||||| || | |||| Sbjct 688124 ACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAAT 688065 Query 17146 CCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA 17205 |||| | |||| || || |||| ||| || | || |||||||| || || || Sbjct 688064 CCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTTAA 688005 Query 17206 TAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTC 17265 ||| || ||||||| | | || | || || || || | | || || |||| Sbjct 688004 TAAGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGTTTC 687945 Query 17266 GGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTG 17325 ||||| ||||| ||||| || || || ||||| || || ||||| | ||||| Sbjct 687944 AGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTG 687885 Query 17326 AACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAA 17385 |||||| | |||| ||| | | ||||| || || || || || || || || Sbjct 687884 AACTTCAGCAGAGAARTTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAA 687825 Query 17386 AAACGCCAATATATGCTT--AATGAAATAT------TTTTCGTCCGGTGTAAGAACGCGC 17437 || |||| | | ||| ||||||| || ||||| | | | | | | Sbjct 687824 GAAAGCCA--AKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTA---TTC 687770 Query 17438 CAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCC 17497 || || | |||||| || || | ||| | |||||| | |||||| ||| ||| | || Sbjct 687769 CAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCT 687710 Query 17498 TTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAATACAACATATCT 17550 | ||||| | |||||| || | ||| || ||||||| ||| |||| Sbjct 687709 CTCTTATAGGCTTCCCAAATTTCTGGGAATTTGATTGGGAATAAAACGAATCT 687657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545483552240