Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq1 147 2e-30
>seq1
Length=1289090
Score = 147 bits (162), Expect = 2e-30
Identities = 578/893 (65%), Gaps = 29/893 (3%)
Strand=Plus/Minus
Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733
|||| ||||| ||| | ||||| || || || || || || ||| ||||| || |
Sbjct 688536 TTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTTT 688477
Query 16734 CCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791
|||| || || || || || || | |||| | |||| | |||| || | | |
Sbjct 688476 CCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGT-TACCTAAGG-CAACTAA 688419
Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTC-GCAGTTCATTCCTA-TA 16849
||||||||| || |||||||| | ||||||| ||||| || ||| ||||| || | ||
Sbjct 688418 TAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCA-TTCATACCAAGTA 688360
Query 16850 AGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATA 16909
| | || |||| || || || ||| | || || |||| ||||| ||||
Sbjct 688359 ATGCA-ACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAGCTTCAGCAATA 688301
Query 16910 ATACTAGCAACTCGTTCCTCGGAC--GG--TGTATGTTTAAGATGTTTAAACATCAGACA 16965
|| || ||| | || | ||| || ||| | |||||| || |||| |||||
Sbjct 688300 ATTCTTTCAAT--GATCTTTGGATCTGGCTTGT-TCTTTAAG-TGRGAGAACAATAGACA 688245
Query 16966 TGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCC 17025
|| || || |||||| || || ||||| | ||| | |||||| || || ||||| ||
Sbjct 688244 GGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACC 688185
Query 17026 GGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATAT 17085
|||||| || |||||| ||||| || || || || || || ||||| || || |
Sbjct 688184 AGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGAC 688125
Query 17086 ACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAAT 17145
||| || || | ||||| || | | || ||| || || ||||| || | ||||
Sbjct 688124 ACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAAT 688065
Query 17146 CCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA 17205
|||| | |||| || || |||| ||| || | || |||||||| || || ||
Sbjct 688064 CCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTTAA 688005
Query 17206 TAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTC 17265
||| || ||||||| | | || | || || || || | | || || ||||
Sbjct 688004 TAAGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGTTTC 687945
Query 17266 GGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTG 17325
||||| ||||| ||||| || || || ||||| || || ||||| | |||||
Sbjct 687944 AGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTG 687885
Query 17326 AACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAA 17385
|||||| | |||| ||| | | ||||| || || || || || || || ||
Sbjct 687884 AACTTCAGCAGAGAARTTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAA 687825
Query 17386 AAACGCCAATATATGCTT--AATGAAATAT------TTTTCGTCCGGTGTAAGAACGCGC 17437
|| |||| | | ||| ||||||| || ||||| | | | | | |
Sbjct 687824 GAAAGCCA--AKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTA---TTC 687770
Query 17438 CAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCC 17497
|| || | |||||| || || | ||| | |||||| | |||||| ||| ||| | ||
Sbjct 687769 CAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCT 687710
Query 17498 TTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAATACAACATATCT 17550
| ||||| | |||||| || | ||| || ||||||| ||| ||||
Sbjct 687709 CTCTTATAGGCTTCCCAAATTTCTGGGAATTTGATTGGGAATAAAACGAATCT 687657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545483552240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |