Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq1 199 4e-46
>seq1
Length=1289090
Score = 199 bits (220), Expect = 4e-46
Identities = 580/885 (66%), Gaps = 13/885 (1%)
Strand=Plus/Minus
Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971
|||| |||||| ||| | ||||| ||||| || || || || |||| ||||| ||||
Sbjct 688536 TTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTTT 688477
Query 15972 CCATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGAGTACCCCAGTTCCGTAAC 16029
||||||| || || || || || | |||| | | || | |||| || |||
Sbjct 688476 CCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGT-TACCTAAGGCAACTAA- 688419
Query 16030 TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAG 16089
||||||||| || |||||||| | |||||| ||||| || ||| || || | |
Sbjct 688418 TAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAA 688359
Query 16090 TCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGAT 16149
| || |||| || | || || | ||| || |||| ||||| ||| ||
Sbjct 688358 TGCAACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAGCTTCAGCAATAAT 688299
Query 16150 ATCGGTGGCTCGTGTTTCAGAC-GGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGA 16208
|| | | | ||| | || | | |||| ||| |||| |||||| || |
Sbjct 688298 -TCTTTCAATGATCTTTGGATCTGGCTTGTTCTTTAAGTGRGAGAACAATAGACAGGCAA 688240
Query 16209 AGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCA 16268
|||| ||||| ||||| ||||| | ||| | ||||||||| ||||| || || ||||
Sbjct 688239 AGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAGGCA 688180
Query 16269 TTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCT 16328
| || |||||| |||||||| || ||||||||||| || || || || | ||| |
Sbjct 688179 TCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACACCTT 688120
Query 16329 CAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATT 16388
|||||| |||||||| | | || ||| || || ||| || |||| ||||||||
Sbjct 688119 CAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATCCATC 688060
Query 16389 TCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAATT 16448
| ||||||| || |||| || || | || |||||||| || || || ||
Sbjct 688059 TAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTTAATAAGA 688000
Query 16449 TCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGT 16508
|| ||||||| ||| | || || || || | | |||| || |||| ||||
Sbjct 687999 AATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGTTTCAGAGT 687940
Query 16509 GTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTT 16568
| ||||| || || || || || || ||||| || ||| || | ||||| ||||
Sbjct 687939 GAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTGAACTT 687880
Query 16569 CCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACG 16628
| | | || ||| ||| ||| ||||| || ||||| ||| |||||||| || |
Sbjct 687879 CAGCAGAGAARTTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAAGAAAG 687820
Query 16629 CCAATATGTGCTT--AATGAAATATTTTTC---GTCAGATGTAAGAATATGCCAATCTTT 16683
|||| | ||| ||||||| || |||| ||| | ||| |||||| |
Sbjct 687819 CCAAKA--CTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATCGTG 687762
Query 16684 TAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATA 16743
|||||| || || | ||| | |||||| | ||||| || ||| | || | |||||
Sbjct 687761 TAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCTTATA 687702
Query 16744 CATTTTCCAAATATCATTGTATTGTATGGGAAATACGACGTATCT 16788
|| |||||| || | ||| || || |||| ||| ||||
Sbjct 687701 GGCTTCCCAAATTTCTGGGAATTTGATTGGGAATAAAACGAATCT 687657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511414284931760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |