Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq12 150 1e-31 >seq12 Length=1055690 Score = 150 bits (166), Expect = 1e-31 Identities = 397/608 (65%), Gaps = 21/608 (3%) Strand=Plus/Minus Query 101677 TTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTC 101736 ||| | |||||| | || || || | ||||||||| || || || || ||||| || Sbjct 820669 TTTYAAAGCATCTACATGRTCCTTGTAAACGTGAGCATCACCCATGGTGTGAATAAATTC 820610 Query 101737 TCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAAT 101796 ||| | | || | || | |||||||| | || || | || ||| |||||| Sbjct 820609 ACCACAATCCATATCAACAACCTTTGCAATCATTCTGGTCAACAAAGCATAAGAAGCAAT 820550 Query 101797 GTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAA---- 101852 ||| || || || || |||||||||||| |||||||| || | ||| || | Sbjct 820549 GTTGAAAGGAACACCCAACCCCATATCACAAGATCTTTGGTATAAGATACATGACAATTG 820490 Query 101853 --GCTTTCCATC---------ACAGACATAAAATTGACTTAATACATGACAAGGCGGCAA 101901 ||||| || | | ||||| ||||||| || || || || ||||| | Sbjct 820489 AGGCTTTTGGTCTTTAGGGAAAGAAACATAGAATTGACAGAAAACGTGGCATGGCGGAAG 820430 Query 101902 CACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCTGTAGG 101961 ||||||| || ||||| |||||||||| |||| | || |||||||| ||| Sbjct 820429 AGCCATTTTCTTAAAGTCTGGTGGATTCCAAGCAGACATGATGATTCTTCTATCGTAAGG 820370 Query 101962 GTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATC 102021 || || || | ||| ||| | | ||||||| || ||||| | | || || Sbjct 820369 ATTGGTCTTCAACTTATGAATTATATCGCTTAATTGATCGTATCCTTTGTTTGTGTAGTC 820310 Query 102022 ---GCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGG 102078 | | | | || | |||||| || || ||||| ||||| || || ||||| ||||| Sbjct 820309 AGTGTGACAATCAAC---ATATTCAGCACCAAAATGTCTCCATTGGAAACCATAAACAGG 820253 Query 102079 TCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCC 102138 || | ||| ||||| ||||||||| || ||||| ||||| || | ||| || Sbjct 820252 ACCTAAATCACCTTCTTCTCTGTCAGTTAACCCAAGAGAATCTAGGTATTSACGAGAACC 820193 Query 102139 ATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCT 102198 ||| |||||||||| | ||||| || | ||| | |||| | | ||| ||| | Sbjct 820192 ATTACCATCCCAAATTTTGACGCCTTCTTTTTGTAGATTTTTGTTATTGGTATCTCCCTT 820133 Query 102199 GATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAG 102258 | |||||| | |||||| | || | || | ||||||||| || || ||||| | Sbjct 820132 AACAAACCAAAGAAGTTCTAATATAATAGCTTTGGTAAATACTCTYTTTGTTGTTAATAA 820073 Query 102259 TGGAAATT 102266 ||||||| Sbjct 820072 AGGAAATT 820065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361251120750518