Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq14 423 2e-113 seq1 197 2e-45 >seq14 Length=1507144 Score = 423 bits (468), Expect = 2e-113 Identities = 1487/2297 (65%), Gaps = 73/2297 (3%) Strand=Plus/Plus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 ||||||||||| | || || || | || || | | |||||||| || || || | | Sbjct 780196 GTGAATTGAATAGCGGCTGAGGCAGCTTGTGTTCTCAAGTAGTACATACCAGTCTTCAAA 780255 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGA-ATAACTCGGATC-TGCTA 52925 || ||||| ||||| || ||||| |||| || ||| | || | || | Sbjct 780256 CCCTTGCTCCAACCGTAGAAGTGCATGGAAGTTAACTTACCCATAGTTGGGGCCATG--A 780313 Query 52926 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 52985 | || || ||||| || ||| |||||| ||||| ||| || || || ||||| | | Sbjct 780314 TGTGAATGTTCATGGAATGAGATTGATCAATGAAAGCTTGTCTATCAGCGGCCATATCAA 780373 Query 52986 TGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 53044 |||| |||||||||| | |||||||| ||||||||| || || ||| || |||| ||| Sbjct 780374 TGATAGTCTTTTGTGATAATTCCCAAACAGTTTTATACAAATC-CTTCATTTCTTGAGGA 780432 Query 53045 AGGTTTGT--ATTCT-GAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCA 53101 | ||||| ||| | | ||||| ||| | | || || || ||| || | ||| Sbjct 780433 ATGTTTGGCAATTGTTGGATAGAACCATTGTTAGCAATGATATTAGACTTCATGGCTTCA 780492 Query 53102 TTCCATAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTC 53160 | ||| ||| | | || |||| | | | | | || || || | ||| |||| Sbjct 780493 TCCCA-AATACCCATATCAACTAAATCCTTCAATAAGTATGGGTTGACAATTTGGTATTC 780551 Query 53161 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATT 53220 ||||| || ||| | || ||| || ||| || | ||||| | | | ||||| | Sbjct 780552 ACCAGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGGTTCGAAACATTCATTGTA 780611 Query 53221 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAG 53280 || |||||||| | ||| || ||||| |||||||| || |||||||| ||||| | Sbjct 780612 ACCTAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAA 780671 Query 53281 ACCGTATGTTCTGATTTTATCTTTTAGAGGTTC---CCAATTCCAAAGATCCGACGGTAC 53337 ||||| | || ||| | || | ||| ||||| ||| | | || | Sbjct 780672 ACCGTGCTTGGCAATCTTAGCCTTCAA---TTCAGTCCAATCCCATARGGTAGTTGGAGC 780728 Query 53338 AACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATC 53397 ||| ||||| || ||| | | || || ||| | || | | | Sbjct 780729 AACGTTCCAGAAATCGTATTGTAAAACACCTTGAGAAGCTGGAGAACCTTCGTAAGAAGC 780788 Query 53398 GTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGT 53457 || | |||||| | ||||||| |||| || || || ||| ||| ||||||||| Sbjct 780789 ATAGGTTCCTTCAATTTCAGCTAATTCAGTGGAAGCTTCCAAAGCAGCGTGATAAATGGT 780848 Query 53458 TTCGAAGATCTTCTTATTTAGATCTTGTGCTTC--CAGGCTATCAAATGGATAATTTAAG 53515 |||||| || | | || | || | |||| ||| ||| |||||| |||| Sbjct 780849 TTCGAAAATTTGAATGTTCAATTCYTTGGCTTTTTCAGA--ATCGAATGGAACTCTTAAC 780906 Query 53516 AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 53575 | ||||| | || || || ||||||||||| | | |||||||| |||||| | ||| Sbjct 780907 ATCATAAAAGTATCAGCCAAACCTTGAACACCTACGGCAATAGGTCTGTGTCTCATGTTA 780966 Query 53576 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTG 53635 || || ||| | || ||| ||||| || | || |||| || | ||| | Sbjct 780967 GATCTTCTAGCAGTTTCAACAGGGTAATAGTTTCTGTCAATAACAGCGTTTAAGTTCTTA 781026 Query 53636 ACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATC--AAATT---GTCC----ATCT 53686 |||| || || || || | ||||| || || || || ||| |||| Sbjct 781027 GCAATAACCTTACAAACTTCGTGAAGTTTTTTGAAGTCGTAAGTTTGAGTCTTTTGATCT 781086 Query 53687 A---------TTACAAACA-TGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTC 53736 ||||||| || | || |||| ||| || | |||||||| || || Sbjct 781087 TCKGAGACCTTTACAAAGGCTGGT-AAGGCAACAGARGCTAAGTTACAAACAGCAGTTTC 781145 Query 53737 ATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAA 53796 ||| |||| | |||| | || ||| || | ||| | | || || || || || Sbjct 781146 CTTATCATCTGAGTATTCAACAATTTCACAACATAAGTTAGAAGATTTAATTGTACCCAA 781205 Query 53797 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGT 53856 || | ||||||| ||||| ||||| |||||||| |||| |||||| || |||||||| Sbjct 781206 GTTCTTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAAGGAGTACCAGT 781265 Query 53857 TTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTA 53916 ||| | |||| ||||| || || | ||| | ||||||| || | ||| || Sbjct 781266 TTCGGTTTGGGCTTCTAAGATGGCGTACCATAACTTTTGAGCCTTGATGGTC--TTTCTA 781323 Query 53917 TCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTG 53974 |||| |||| ||||||| | ||| | |||||| || || || || ||| Sbjct 781324 CCTCTACCTTCTAGTTCGTATTGGTCATAWAGCTTTTCAAAGTCATCACCATAAGCATCR 781383 Query 53975 TCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGT 54034 ||| |||||| |||| ||| | | || | ||| || || | |||| |||| Sbjct 781384 CTCAAACCAGGAGCTTCACTAGGAGAGAATAAAGTCCAATCACCATTTGCCTTGACTCTC 781443 Query 54035 TTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCG 54094 ||||| || | ||||||||||| | |||| |||| |||||| | ||| ||| || Sbjct 781444 TTCATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCTTCC 781503 Query 54095 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 54154 || || ||| ||| | | |||| ||| | | |||||||| ||||| ||||| | | Sbjct 781504 TTACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCCATGGTTCTAGG 781563 Query 54155 TATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 54214 || | | | | ||||| | |||||| || || ||||| | ||||| || ||||| Sbjct 781564 TACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACATATCTGGCAGTGTTG 781623 Query 54215 TTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAG 54274 || ||||||| | ||| ||||| | ||||||||| | ||||||||| || | || || Sbjct 781624 TTGAAAACTCTAACCATAGGAATCAAACCATTGGAAGTACCATTGGTACCAGCAATGTAA 781683 Query 54275 CTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATT 54334 ||| ||| | || || ||| || ||| || || || || | ||||| ||| Sbjct 781684 GAGCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCKGCAGTCTTAGAAATT 781743 Query 54335 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 54394 || ||| || || ||||||||||| || || ||| ||||||| |||| || | Sbjct 781744 TGAGCACATTCCTTYAAGGTATCATAGATACCGTCAATAGAATCATCCTTCATAGAAATT 781803 Query 54395 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 54454 | ||||| ||||||||| | | ||| || ||||| |||| || |||||||| Sbjct 781804 AAGAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAAGCA 781863 Query 54455 TGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTAT-ATCCCA 54513 || ||||| || ||| ||| | | ||||| || ||||| || || || | || Sbjct 781864 TGGGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTTCAATGTTTTCA 781923 Query 54514 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 54573 | || || || || || || | ||| | || || || ||||||||||||||||| Sbjct 781924 CCG-TGGATACCAACAGCAACTCTCATRATCAAATGTTGTGGTCTTTCAACGATCTTACC 781982 Query 54574 GTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAA 54631 || || |||| ||||| ||| ||||||| || || ||||||||||||||||| |||| Sbjct 781983 ATTGATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAGTTGAA 782042 Query 54632 AAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAAC-----TA 54686 | |||| || | |||||| | | | |||| || | ||| |||| || Sbjct 782043 A--TCTCTATCRAAGATAATAGTAGCATCTAAGGTATCTTTGTGTTTCATAACGGTTTTA 782100 Query 54687 CATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGT 54746 | ||| | | ||||| || ||||| |||||| | || || |||| Sbjct 782101 TAAACATCATCA-----GAAATCATTGGAGACAAAACACCATTTCTTTCGTTAACGTAGT 782155 Query 54747 TAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATT--TGA 54804 | |||| || | || |||| | ||||| |||||| |||| ||||||| || ||| Sbjct 782156 TGTATAAGTCTTCGATAACTTGAGAAAATAATTTTTTGGTTTGCTTGTGTAAGTTACTGA 782215 Query 54805 TACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTG 54863 | ||| ||||| ||||| |||| |||||||| ||||| || || || || ||| Sbjct 782216 T--GGCAATTCTGGCGGCAAGAACAGCATAATCAGGATGAACAGTGGT-CATGTAGGCAC 782272 Query 54864 CTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGA 54923 |||| || | | | || ||||| | || || || || | || | || || Sbjct 782273 AAGTTTCAGCGGCTAAGTTATCTAATTCGATGGTAGTAACACCTTCGTAGACACCGGAGA 782332 Query 54924 TAACCTTCAT--AGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAA 54981 ||| ||| | | ||||| | |||||| ||||| | || | ||| ||||| ||||| Sbjct 782333 TAA--TTCTTTGGGTGATTTTGACAGGATCGATATGTTTAGCATCTAATCCATAGCATAA 782390 Query 54982 TTTTCTAATACGAGATGTGATTTTATCAAACATGACATTTTCCTTGT-ATCCATTTCGTT 55040 | | ||| | ||||| ||||||||||| ||| | ||| | ||| | || || Sbjct 782391 TCTAGCAATTCTGGATGTAATTTTATCAAA-TTGAACTGGAACTTTTCTTCCGTCTCTTT 782449 Query 55041 TAATGACAAACATTTTT 55057 ||| |||||||| ||| Sbjct 782450 TAACAACAAACATGTTT 782466 >seq1 Length=1289090 Score = 197 bits (218), Expect = 2e-45 Identities = 584/888 (66%), Gaps = 20/888 (2%) Strand=Plus/Minus Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903 ||||| || ||| || | ||||| || ||||| || ||||| |||| ||||| ||| Sbjct 688537 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 688478 Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCC-AATTCAGAAAT 23962 ||||| || ||| |||| ||||| ||||| | | ||||| | || || || | Sbjct 688477 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAG-CTTTTCGTTACCTAAGGCAACTAA 688419 Query 23963 CAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 24022 |||||||| || ||||| || | |||| ||||| | ||| |||||| || | | Sbjct 688418 TAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAA 688359 Query 24023 TTTAACTGGAAGAGCCACAGTAAGAAAT-TCTTGTTCAATAGAGACCGCGTCTGTTATAA 24081 | |||||||| || || || || |||| |||||| || || || | |||| Sbjct 688358 TGCAACTGGAATGGCATCAACAAAGTATCTCTT-TTCAATTTCAACAGCTTCAGCAATAA 688300 Query 24082 TAGATCTTAC--TGTTTCTTCACTC-GGTGGATACAATAAATGTTTAAACATCAAACATG 24138 | |||| | || | || || || | | ||| || |||| | ||| | Sbjct 688299 T---TCTTTCAATGATCTTTGGATCTGGCTTGTTCTTTAAGTGRGAGAACAATAGACAGG 688243 Query 24139 CGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGG 24198 | || || |||| ||| || ||||||| || ||||||||||| || || | || | Sbjct 688242 CAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAG 688183 Query 24199 GCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTC 24258 |||| | || || || | ||| || || | |||||||| ||||| || || | | Sbjct 688182 GCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACAC 688123 Query 24259 CTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCTGTCATGTATCC 24315 |||| || || ||||| |||| |||||||| || | | || | | || || |||| Sbjct 688122 CTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATCC 688063 Query 24316 ACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGA 24375 | | |||||| || ||||| | || | ||| || || |||||||| || || | Sbjct 688062 ATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTTAATA 688003 Query 24376 GATAGtttttttCATTACTATCTTTAACATATGTATC-AATCA-AAAGACTATACATTTC 24433 | | ||||| || ||| || | ||||| || ||| | ||||| ||| |||| Sbjct 688002 AGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGA--ATAAGTTTC 687945 Query 24434 CGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTG 24493 || ||||||||||| || ||||| || ||||||||||| |||| || | ||| || Sbjct 687944 AGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTG 687885 Query 24494 TACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAA 24553 ||||| | | || ||| | || |||||||| || || || ||| || ||||| Sbjct 687884 AACTTCAGCAGAGAARTTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAA 687825 Query 24554 AAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATC 24610 || ||||| || | || ||| || |||| | | | | | ||||||||||| Sbjct 687824 GAAAGCCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATC 687765 Query 24611 ATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTT 24670 | | ||| ||||| | ||| | |||||| | ||||| || || || || || | || Sbjct 687764 GTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCTT 687705 Query 24671 ATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 24718 ||| | ||| || || | ||| ||||| || | ||| ||||| Sbjct 687704 ATAGGCTTCCCAAATTTCTGGGAATTTGATTGGGAATAAAACGAATCT 687657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721466412640