Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq14 423 2e-113
seq1 197 2e-45
>seq14
Length=1507144
Score = 423 bits (468), Expect = 2e-113
Identities = 1487/2297 (65%), Gaps = 73/2297 (3%)
Strand=Plus/Plus
Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867
||||||||||| | || || || | || || | | |||||||| || || || | |
Sbjct 780196 GTGAATTGAATAGCGGCTGAGGCAGCTTGTGTTCTCAAGTAGTACATACCAGTCTTCAAA 780255
Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGA-ATAACTCGGATC-TGCTA 52925
|| ||||| ||||| || ||||| |||| || ||| | || | || |
Sbjct 780256 CCCTTGCTCCAACCGTAGAAGTGCATGGAAGTTAACTTACCCATAGTTGGGGCCATG--A 780313
Query 52926 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 52985
| || || ||||| || ||| |||||| ||||| ||| || || || ||||| | |
Sbjct 780314 TGTGAATGTTCATGGAATGAGATTGATCAATGAAAGCTTGTCTATCAGCGGCCATATCAA 780373
Query 52986 TGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 53044
|||| |||||||||| | |||||||| ||||||||| || || ||| || |||| |||
Sbjct 780374 TGATAGTCTTTTGTGATAATTCCCAAACAGTTTTATACAAATC-CTTCATTTCTTGAGGA 780432
Query 53045 AGGTTTGT--ATTCT-GAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCA 53101
| ||||| ||| | | ||||| ||| | | || || || ||| || | |||
Sbjct 780433 ATGTTTGGCAATTGTTGGATAGAACCATTGTTAGCAATGATATTAGACTTCATGGCTTCA 780492
Query 53102 TTCCATAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTC 53160
| ||| ||| | | || |||| | | | | | || || || | ||| ||||
Sbjct 780493 TCCCA-AATACCCATATCAACTAAATCCTTCAATAAGTATGGGTTGACAATTTGGTATTC 780551
Query 53161 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATT 53220
||||| || ||| | || ||| || ||| || | ||||| | | | ||||| |
Sbjct 780552 ACCAGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGGTTCGAAACATTCATTGTA 780611
Query 53221 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAG 53280
|| |||||||| | ||| || ||||| |||||||| || |||||||| ||||| |
Sbjct 780612 ACCTAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAA 780671
Query 53281 ACCGTATGTTCTGATTTTATCTTTTAGAGGTTC---CCAATTCCAAAGATCCGACGGTAC 53337
||||| | || ||| | || | ||| ||||| ||| | | || |
Sbjct 780672 ACCGTGCTTGGCAATCTTAGCCTTCAA---TTCAGTCCAATCCCATARGGTAGTTGGAGC 780728
Query 53338 AACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATC 53397
||| ||||| || ||| | | || || ||| | || | | |
Sbjct 780729 AACGTTCCAGAAATCGTATTGTAAAACACCTTGAGAAGCTGGAGAACCTTCGTAAGAAGC 780788
Query 53398 GTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGT 53457
|| | |||||| | ||||||| |||| || || || ||| ||| |||||||||
Sbjct 780789 ATAGGTTCCTTCAATTTCAGCTAATTCAGTGGAAGCTTCCAAAGCAGCGTGATAAATGGT 780848
Query 53458 TTCGAAGATCTTCTTATTTAGATCTTGTGCTTC--CAGGCTATCAAATGGATAATTTAAG 53515
|||||| || | | || | || | |||| ||| ||| |||||| ||||
Sbjct 780849 TTCGAAAATTTGAATGTTCAATTCYTTGGCTTTTTCAGA--ATCGAATGGAACTCTTAAC 780906
Query 53516 AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 53575
| ||||| | || || || ||||||||||| | | |||||||| |||||| | |||
Sbjct 780907 ATCATAAAAGTATCAGCCAAACCTTGAACACCTACGGCAATAGGTCTGTGTCTCATGTTA 780966
Query 53576 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTG 53635
|| || ||| | || ||| ||||| || | || |||| || | ||| |
Sbjct 780967 GATCTTCTAGCAGTTTCAACAGGGTAATAGTTTCTGTCAATAACAGCGTTTAAGTTCTTA 781026
Query 53636 ACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATC--AAATT---GTCC----ATCT 53686
|||| || || || || | ||||| || || || || ||| ||||
Sbjct 781027 GCAATAACCTTACAAACTTCGTGAAGTTTTTTGAAGTCGTAAGTTTGAGTCTTTTGATCT 781086
Query 53687 A---------TTACAAACA-TGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTC 53736
||||||| || | || |||| ||| || | |||||||| || ||
Sbjct 781087 TCKGAGACCTTTACAAAGGCTGGT-AAGGCAACAGARGCTAAGTTACAAACAGCAGTTTC 781145
Query 53737 ATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAA 53796
||| |||| | |||| | || ||| || | ||| | | || || || || ||
Sbjct 781146 CTTATCATCTGAGTATTCAACAATTTCACAACATAAGTTAGAAGATTTAATTGTACCCAA 781205
Query 53797 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGT 53856
|| | ||||||| ||||| ||||| |||||||| |||| |||||| || ||||||||
Sbjct 781206 GTTCTTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAAGGAGTACCAGT 781265
Query 53857 TTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTA 53916
||| | |||| ||||| || || | ||| | ||||||| || | ||| ||
Sbjct 781266 TTCGGTTTGGGCTTCTAAGATGGCGTACCATAACTTTTGAGCCTTGATGGTC--TTTCTA 781323
Query 53917 TCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTG 53974
|||| |||| ||||||| | ||| | |||||| || || || || |||
Sbjct 781324 CCTCTACCTTCTAGTTCGTATTGGTCATAWAGCTTTTCAAAGTCATCACCATAAGCATCR 781383
Query 53975 TCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGT 54034
||| |||||| |||| ||| | | || | ||| || || | |||| ||||
Sbjct 781384 CTCAAACCAGGAGCTTCACTAGGAGAGAATAAAGTCCAATCACCATTTGCCTTGACTCTC 781443
Query 54035 TTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCG 54094
||||| || | ||||||||||| | |||| |||| |||||| | ||| ||| ||
Sbjct 781444 TTCATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCTTCC 781503
Query 54095 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 54154
|| || ||| ||| | | |||| ||| | | |||||||| ||||| ||||| | |
Sbjct 781504 TTACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCCATGGTTCTAGG 781563
Query 54155 TATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 54214
|| | | | | ||||| | |||||| || || ||||| | ||||| || |||||
Sbjct 781564 TACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACATATCTGGCAGTGTTG 781623
Query 54215 TTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAG 54274
|| ||||||| | ||| ||||| | ||||||||| | ||||||||| || | || ||
Sbjct 781624 TTGAAAACTCTAACCATAGGAATCAAACCATTGGAAGTACCATTGGTACCAGCAATGTAA 781683
Query 54275 CTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATT 54334
||| ||| | || || ||| || ||| || || || || | ||||| |||
Sbjct 781684 GAGCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCKGCAGTCTTAGAAATT 781743
Query 54335 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 54394
|| ||| || || ||||||||||| || || ||| ||||||| |||| || |
Sbjct 781744 TGAGCACATTCCTTYAAGGTATCATAGATACCGTCAATAGAATCATCCTTCATAGAAATT 781803
Query 54395 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 54454
| ||||| ||||||||| | | ||| || ||||| |||| || ||||||||
Sbjct 781804 AAGAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAAGCA 781863
Query 54455 TGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTAT-ATCCCA 54513
|| ||||| || ||| ||| | | ||||| || ||||| || || || | ||
Sbjct 781864 TGGGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTTCAATGTTTTCA 781923
Query 54514 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 54573
| || || || || || || | ||| | || || || |||||||||||||||||
Sbjct 781924 CCG-TGGATACCAACAGCAACTCTCATRATCAAATGTTGTGGTCTTTCAACGATCTTACC 781982
Query 54574 GTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAA 54631
|| || |||| ||||| ||| ||||||| || || ||||||||||||||||| ||||
Sbjct 781983 ATTGATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAGTTGAA 782042
Query 54632 AAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAAC-----TA 54686
| |||| || | |||||| | | | |||| || | ||| |||| ||
Sbjct 782043 A--TCTCTATCRAAGATAATAGTAGCATCTAAGGTATCTTTGTGTTTCATAACGGTTTTA 782100
Query 54687 CATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGT 54746
| ||| | | ||||| || ||||| |||||| | || || ||||
Sbjct 782101 TAAACATCATCA-----GAAATCATTGGAGACAAAACACCATTTCTTTCGTTAACGTAGT 782155
Query 54747 TAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATT--TGA 54804
| |||| || | || |||| | ||||| |||||| |||| ||||||| || |||
Sbjct 782156 TGTATAAGTCTTCGATAACTTGAGAAAATAATTTTTTGGTTTGCTTGTGTAAGTTACTGA 782215
Query 54805 TACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTG 54863
| ||| ||||| ||||| |||| |||||||| ||||| || || || || |||
Sbjct 782216 T--GGCAATTCTGGCGGCAAGAACAGCATAATCAGGATGAACAGTGGT-CATGTAGGCAC 782272
Query 54864 CTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGA 54923
|||| || | | | || ||||| | || || || || | || | || ||
Sbjct 782273 AAGTTTCAGCGGCTAAGTTATCTAATTCGATGGTAGTAACACCTTCGTAGACACCGGAGA 782332
Query 54924 TAACCTTCAT--AGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAA 54981
||| ||| | | ||||| | |||||| ||||| | || | ||| ||||| |||||
Sbjct 782333 TAA--TTCTTTGGGTGATTTTGACAGGATCGATATGTTTAGCATCTAATCCATAGCATAA 782390
Query 54982 TTTTCTAATACGAGATGTGATTTTATCAAACATGACATTTTCCTTGT-ATCCATTTCGTT 55040
| | ||| | ||||| ||||||||||| ||| | ||| | ||| | || ||
Sbjct 782391 TCTAGCAATTCTGGATGTAATTTTATCAAA-TTGAACTGGAACTTTTCTTCCGTCTCTTT 782449
Query 55041 TAATGACAAACATTTTT 55057
||| |||||||| |||
Sbjct 782450 TAACAACAAACATGTTT 782466
>seq1
Length=1289090
Score = 197 bits (218), Expect = 2e-45
Identities = 584/888 (66%), Gaps = 20/888 (2%)
Strand=Plus/Minus
Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903
||||| || ||| || | ||||| || ||||| || ||||| |||| ||||| |||
Sbjct 688537 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 688478
Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCC-AATTCAGAAAT 23962
||||| || ||| |||| ||||| ||||| | | ||||| | || || || |
Sbjct 688477 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAG-CTTTTCGTTACCTAAGGCAACTAA 688419
Query 23963 CAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 24022
|||||||| || ||||| || | |||| ||||| | ||| |||||| || | |
Sbjct 688418 TAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAA 688359
Query 24023 TTTAACTGGAAGAGCCACAGTAAGAAAT-TCTTGTTCAATAGAGACCGCGTCTGTTATAA 24081
| |||||||| || || || || |||| |||||| || || || | ||||
Sbjct 688358 TGCAACTGGAATGGCATCAACAAAGTATCTCTT-TTCAATTTCAACAGCTTCAGCAATAA 688300
Query 24082 TAGATCTTAC--TGTTTCTTCACTC-GGTGGATACAATAAATGTTTAAACATCAAACATG 24138
| |||| | || | || || || | | ||| || |||| | ||| |
Sbjct 688299 T---TCTTTCAATGATCTTTGGATCTGGCTTGTTCTTTAAGTGRGAGAACAATAGACAGG 688243
Query 24139 CGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGG 24198
| || || |||| ||| || ||||||| || ||||||||||| || || | || |
Sbjct 688242 CAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAG 688183
Query 24199 GCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTC 24258
|||| | || || || | ||| || || | |||||||| ||||| || || | |
Sbjct 688182 GCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACAC 688123
Query 24259 CTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCTGTCATGTATCC 24315
|||| || || ||||| |||| |||||||| || | | || | | || || ||||
Sbjct 688122 CTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATCC 688063
Query 24316 ACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGA 24375
| | |||||| || ||||| | || | ||| || || |||||||| || || |
Sbjct 688062 ATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTTAATA 688003
Query 24376 GATAGtttttttCATTACTATCTTTAACATATGTATC-AATCA-AAAGACTATACATTTC 24433
| | ||||| || ||| || | ||||| || ||| | ||||| ||| ||||
Sbjct 688002 AGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGA--ATAAGTTTC 687945
Query 24434 CGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTG 24493
|| ||||||||||| || ||||| || ||||||||||| |||| || | ||| ||
Sbjct 687944 AGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTG 687885
Query 24494 TACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAA 24553
||||| | | || ||| | || |||||||| || || || ||| || |||||
Sbjct 687884 AACTTCAGCAGAGAARTTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAA 687825
Query 24554 AAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATC 24610
|| ||||| || | || ||| || |||| | | | | | |||||||||||
Sbjct 687824 GAAAGCCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATC 687765
Query 24611 ATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTT 24670
| | ||| ||||| | ||| | |||||| | ||||| || || || || || | ||
Sbjct 687764 GTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCTT 687705
Query 24671 ATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 24718
||| | ||| || || | ||| ||||| || | ||| |||||
Sbjct 687704 ATAGGCTTCCCAAATTTCTGGGAATTTGATTGGGAATAAAACGAATCT 687657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721466412640
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