Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq12 163 4e-35
seq16 156 6e-33
seq18 149 9e-31
seq15 118 2e-21
>seq12
Length=1055690
Score = 163 bits (180), Expect = 4e-35
Identities = 431/658 (66%), Gaps = 18/658 (3%)
Strand=Plus/Minus
Query 205317 TCtttttatttttaattttGGAAATGGGTTTGGTGTACGTTCTAATTGtttttttAATCC 205376
||||||||||| ||| | || ||| |||| || | ||| | ||||| ||| || |
Sbjct 820720 TCTTTTTATTTCTAAAGTAGGGAATTCTCTTGGAGTTCTTTCAAKTTGTTCTTTYAAAGC 820661
Query 205377 ATTAATATGATTAACATATATATGTGCATTACCAATATTATGAATAAATTCATATGGTTT 205436
|| | ||| | || | || |||| ||| || | |||||||||||| |
Sbjct 820660 ATCTACATGRTCCTTGTAAACGTGAGCATCACCCATGGTGTGAATAAATTCACCACAATC 820601
Query 205437 TAAATTAGTTAAATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGG 205496
| || | | | ||||||||| ||||| ||| |||| ||||| || || ||
Sbjct 820600 CATATCAACAACCTTTGCAATCATTCTGGTCAACAAAGCATAAGAAGCAATGTTGAAAGG 820541
Query 205497 TACACCTAAACCCATATCAGCTGATCTTTG-------ATACATTTGACATGTAAGATATT 205549
||||| || ||||||||| |||||||| |||||| |||| | || ||
Sbjct 820540 AACACCCAACCCCATATCACAAGATCTTTGGTATAAGATACAT--GACAATTGAGGCTTT 820483
Query 205550 TATTATTAATT-------ACATGAAATTGT-ACAAAACAATGACAAGGTGGTATAACCAT 205601
| | || | |||| ||||| | ||||| || || || || | | ||||
Sbjct 820482 TGGTCTTTAGGGAAAGAAACATAGAATTGACAGAAAACG-TGGCATGGCGGAAGAGCCAT 820424
Query 205602 ATTTTCAACATCTATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttatt 205661
|| | || ||| |||||||| || | | || || ||||| | ||| || |
Sbjct 820423 TTTCTTAAAGTCTGGTGGATTCCAAGCAGACATGATGATTCTTCTATCGTAAGGATTGGT 820364
Query 205662 ttttattttatttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATC 205721
|| | |||| || |||| |||||||||| |||||| ||||| || | || |
Sbjct 820363 CTTCAACTTATGAATTATATCGCTTAATTGATCGTATCCTTTGTTTGTGTAGTCAGTGTG 820304
Query 205722 CATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATC 205781
||||| ||||| |||||||||||| | |||||| ||||||||||| |||||||||||
Sbjct 820303 ACAATCAACATATTCAGCACCAAAATGTCTCCATTGGAAACCATAAACAGGACCTAAATC 820244
Query 205782 ACCTTCTTTTCTATCATTAAAACCACGtttttttatatattttaatgatccattttcatc 205841
|||||||| ||| ||| | || ||| | | || |||| || ||||| ||||
Sbjct 820243 ACCTTCTTCTCTGTCAGTTAACCCAAGAGAATCTAGGTATTSACGAGAACCATTACCATC 820184
Query 205842 ccaaatatggattcctttattttttaGAATATTTGTATTAGTTGATCCAGATATAAACCA 205901
|||||| | || |||| |||| |||| | || |||| || ||| | ||||||
Sbjct 820183 CCAAATTTTGACGCCTTCTTTTTGTAGATTTTTGTTATTGGTATCTCCCTTAACAAACCA 820124
Query 205902 TAATAATTCTTCAACAATTCCTCTCCAAAACATTGATTTTGTTGTAAATAATGGAAAT 205959
| | |||| | ||| || | ||| | | |||||||| ||||| ||||||
Sbjct 820123 AAGAAGTTCTAATATAATAGCTTTGGTAAATACTCTYTTTGTTGTTAATAAAGGAAAT 820066
>seq16
Length=726111
Score = 156 bits (172), Expect = 6e-33
Identities = 173/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595
||||||||||| ||| | || || |||| || || || || ||| |||| ||||| |
Sbjct 202337 ACAATGCAAATCTTTGTTAAAACTTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCT 202396
Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655
| ||| | || | | ||| ||||| |||||||| |||||||| || ||||||
Sbjct 202397 AGTGACTCTATCGACGCTGTCAAATCTAAAATCCAAGATAAGGAAGGTATTCCTCCTGAT 202456
Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715
|||||||| | ||||| || || ||||||||||| ||| || |||||||| |||||
Sbjct 202457 CAACAAAGATTGATTTTCGCCGGTAAACAATTAGAAGATGGTAGAACATTATCTGATTAC 202516
Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766
|| |||||||||||||| ||| | ||| | || ||| | ||| ||||||||
Sbjct 202517 AACATTCAAAAAGAATCCACTCTCCATCTAGTCTTAAGATTAAGAGGTGGT 202567
>seq18
Length=436904
Score = 149 bits (164), Expect = 9e-31
Identities = 175/237 (74%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
||||||||| || |||| || ||||| || || || || ||| | ||| | ||| |
Sbjct 25387 AATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCTTC 25446
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|||| | || ||| | || ||||| ||||| ||||||||||| |||||||||||
Sbjct 25447 TGATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATTCCACCTGATCA 25506
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|||||| | || || || || || |||||||| ||| || |||| ||| || || ||
Sbjct 25507 ACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTACAA 25566
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774
|||||||||||||| ||||| || || || ||| | ||| |||||||| ||| ||
Sbjct 25567 CATTCAAAAAGAATCCACTTTACACTTAGTCTTAAGATTAAGAGGTGGTGGTAAGAA 25623
>seq15
Length=137011
Score = 118 bits (130), Expect = 2e-21
Identities = 115/148 (78%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682
|| || ||||| || |||||||| ||||||||||||||||| | || ||||| || |||
Sbjct 39030 AAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTAATCTTTGCTGGTAAA 38971
Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742
|||||||| || || |||| ||| ||||| || || ||||||||||| ||| | ||
Sbjct 38970 CAATTAGAAGACGGTAGAACCTTATCTGATTACAACATCCAAAAAGAATCTACTCTACAC 38911
Query 124743 TTGGTTTTACGTTTACGAGGTGGTATTA 124770
|| ||| || | || |||||||| |||
Sbjct 38910 TTAGTTCTAAGATTGAGAGGTGGTGTTA 38883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755455830022400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |