Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq12 163 4e-35 seq16 156 6e-33 seq18 149 9e-31 seq15 118 2e-21 >seq12 Length=1055690 Score = 163 bits (180), Expect = 4e-35 Identities = 431/658 (66%), Gaps = 18/658 (3%) Strand=Plus/Minus Query 205317 TCtttttatttttaattttGGAAATGGGTTTGGTGTACGTTCTAATTGtttttttAATCC 205376 ||||||||||| ||| | || ||| |||| || | ||| | ||||| ||| || | Sbjct 820720 TCTTTTTATTTCTAAAGTAGGGAATTCTCTTGGAGTTCTTTCAAKTTGTTCTTTYAAAGC 820661 Query 205377 ATTAATATGATTAACATATATATGTGCATTACCAATATTATGAATAAATTCATATGGTTT 205436 || | ||| | || | || |||| ||| || | |||||||||||| | Sbjct 820660 ATCTACATGRTCCTTGTAAACGTGAGCATCACCCATGGTGTGAATAAATTCACCACAATC 820601 Query 205437 TAAATTAGTTAAATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGG 205496 | || | | | ||||||||| ||||| ||| |||| ||||| || || || Sbjct 820600 CATATCAACAACCTTTGCAATCATTCTGGTCAACAAAGCATAAGAAGCAATGTTGAAAGG 820541 Query 205497 TACACCTAAACCCATATCAGCTGATCTTTG-------ATACATTTGACATGTAAGATATT 205549 ||||| || ||||||||| |||||||| |||||| |||| | || || Sbjct 820540 AACACCCAACCCCATATCACAAGATCTTTGGTATAAGATACAT--GACAATTGAGGCTTT 820483 Query 205550 TATTATTAATT-------ACATGAAATTGT-ACAAAACAATGACAAGGTGGTATAACCAT 205601 | | || | |||| ||||| | ||||| || || || || | | |||| Sbjct 820482 TGGTCTTTAGGGAAAGAAACATAGAATTGACAGAAAACG-TGGCATGGCGGAAGAGCCAT 820424 Query 205602 ATTTTCAACATCTATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttatt 205661 || | || ||| |||||||| || | | || || ||||| | ||| || | Sbjct 820423 TTTCTTAAAGTCTGGTGGATTCCAAGCAGACATGATGATTCTTCTATCGTAAGGATTGGT 820364 Query 205662 ttttattttatttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATC 205721 || | |||| || |||| |||||||||| |||||| ||||| || | || | Sbjct 820363 CTTCAACTTATGAATTATATCGCTTAATTGATCGTATCCTTTGTTTGTGTAGTCAGTGTG 820304 Query 205722 CATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATC 205781 ||||| ||||| |||||||||||| | |||||| ||||||||||| ||||||||||| Sbjct 820303 ACAATCAACATATTCAGCACCAAAATGTCTCCATTGGAAACCATAAACAGGACCTAAATC 820244 Query 205782 ACCTTCTTTTCTATCATTAAAACCACGtttttttatatattttaatgatccattttcatc 205841 |||||||| ||| ||| | || ||| | | || |||| || ||||| |||| Sbjct 820243 ACCTTCTTCTCTGTCAGTTAACCCAAGAGAATCTAGGTATTSACGAGAACCATTACCATC 820184 Query 205842 ccaaatatggattcctttattttttaGAATATTTGTATTAGTTGATCCAGATATAAACCA 205901 |||||| | || |||| |||| |||| | || |||| || ||| | |||||| Sbjct 820183 CCAAATTTTGACGCCTTCTTTTTGTAGATTTTTGTTATTGGTATCTCCCTTAACAAACCA 820124 Query 205902 TAATAATTCTTCAACAATTCCTCTCCAAAACATTGATTTTGTTGTAAATAATGGAAAT 205959 | | |||| | ||| || | ||| | | |||||||| ||||| |||||| Sbjct 820123 AAGAAGTTCTAATATAATAGCTTTGGTAAATACTCTYTTTGTTGTTAATAAAGGAAAT 820066 >seq16 Length=726111 Score = 156 bits (172), Expect = 6e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595 ||||||||||| ||| | || || |||| || || || || ||| |||| ||||| | Sbjct 202337 ACAATGCAAATCTTTGTTAAAACTTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCT 202396 Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 | ||| | || | | ||| ||||| |||||||| |||||||| || |||||| Sbjct 202397 AGTGACTCTATCGACGCTGTCAAATCTAAAATCCAAGATAAGGAAGGTATTCCTCCTGAT 202456 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 |||||||| | ||||| || || ||||||||||| ||| || |||||||| ||||| Sbjct 202457 CAACAAAGATTGATTTTCGCCGGTAAACAATTAGAAGATGGTAGAACATTATCTGATTAC 202516 Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 || |||||||||||||| ||| | ||| | || ||| | ||| |||||||| Sbjct 202517 AACATTCAAAAAGAATCCACTCTCCATCTAGTCTTAAGATTAAGAGGTGGT 202567 >seq18 Length=436904 Score = 149 bits (164), Expect = 9e-31 Identities = 175/237 (74%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || |||| || ||||| || || || || ||| | ||| | ||| | Sbjct 25387 AATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCTTC 25446 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||| | || ||| | || ||||| ||||| ||||||||||| ||||||||||| Sbjct 25447 TGATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATTCCACCTGATCA 25506 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||| | || || || || || |||||||| ||| || |||| ||| || || || Sbjct 25507 ACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTACAA 25566 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774 |||||||||||||| ||||| || || || ||| | ||| |||||||| ||| || Sbjct 25567 CATTCAAAAAGAATCCACTTTACACTTAGTCTTAAGATTAAGAGGTGGTGGTAAGAA 25623 >seq15 Length=137011 Score = 118 bits (130), Expect = 2e-21 Identities = 115/148 (78%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 || || ||||| || |||||||| ||||||||||||||||| | || ||||| || ||| Sbjct 39030 AAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTAATCTTTGCTGGTAAA 38971 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 |||||||| || || |||| ||| ||||| || || ||||||||||| ||| | || Sbjct 38970 CAATTAGAAGACGGTAGAACCTTATCTGATTACAACATCCAAAAAGAATCTACTCTACAC 38911 Query 124743 TTGGTTTTACGTTTACGAGGTGGTATTA 124770 || ||| || | || |||||||| ||| Sbjct 38910 TTAGTTCTAAGATTGAGAGGTGGTGTTA 38883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755455830022400