Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq1 250 2e-61
>seq1
Length=1289090
Score = 250 bits (276), Expect = 2e-61
Identities = 575/859 (67%), Gaps = 17/859 (2%)
Strand=Plus/Minus
Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003
|||||||| ||| ||||||||||||||||||||| || || || |||| || || |||
Sbjct 688537 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 688478
Query 16004 TCCATAAAATCAAAAGGATTTTT-----TGAACAATAGTATTTATCGCATCCCAATTCCA 16058
|||||||| || || || || | |||||| || ||| || || | |
Sbjct 688477 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGC-----TTTTCGTTACCTAAGGCAA 688423
Query 16059 ACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTA 16118
||||||||||| || |||||||| | ||| || ||||||| |||| ||||| || |
Sbjct 688422 CTAATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAA 688363
Query 16119 TTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGA 16178
|||| ||| || || || || || | | ||||| || | ||| |||||| |
Sbjct 688362 GTAATGCAACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAGCTTCAGCAA 688303
Query 16179 TTATATCTCTTACTACACTATTTAAC-GGAGGGTTTAATAAGTGTTTAAACATTATACAA 16237
| || ||| | | | || | | | || ||| |||||| |||| || |||
Sbjct 688302 TAAT-TCTTTCAATGATCTTTGGATCTGGCTTGTTCTTTAAGTGRGAGAACAATAGACAG 688244
Query 16238 GCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCT 16297
||||| ||| ||| || ||||| || |||| || || ||||| || || || | |||
Sbjct 688243 GCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCA 688184
Query 16298 GGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATA 16357
||||| | || ||| || | ||| || ||||| |||||||||||||| || || | |
Sbjct 688183 GGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACA 688124
Query 16358 CCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatc 16417
|||||||| || ||||| ||||||| || ||| | || | ||| || |||
Sbjct 688123 CCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATC 688064
Query 16418 cattttttagcccaatttgctttttgtttAA-CACAGTTCATGTTCTCTATTGCATTAAA 16476
||| | ||||||| | || |||| |||| ||| || | ||||| || || ||
Sbjct 688063 CATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAG-GAATAGTTTCTATAGCGTTTAA 688005
Query 16477 TAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTC 16536
||| ||| ||||| || ||| || || || |||| || |||| ||| ||||
Sbjct 688004 TAAGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGTTTC 687945
Query 16537 TGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTG 16596
|| ||||| || ||||| || || ||||| || || || ||||||| | |||||
Sbjct 687944 AGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTG 687885
Query 16597 TACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAA 16656
||||||| | || |||| | |||||||| || || || ||||| ||| |||||
Sbjct 687884 AACTTCAGCAGAGAARTTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAA 687825
Query 16657 AAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC--TGAAAGTTTTA-ACCAGTC 16713
|| || | | | ||| ||| | |||| || || | | | ||| ||| ||
Sbjct 687824 GAAAGCCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATC 687765
Query 16714 AGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTT 16773
||||| || || ||||||| ||||| | ||||| |||||||| | || | ||
Sbjct 687764 GTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCTT 687705
Query 16774 ATACATTTTCCATATGTCT 16792
||| || ||| || |||
Sbjct 687704 ATAGGCTTCCCAAATTTCT 687686
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511895934800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |