Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq1 250 2e-61 >seq1 Length=1289090 Score = 250 bits (276), Expect = 2e-61 Identities = 575/859 (67%), Gaps = 17/859 (2%) Strand=Plus/Minus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 |||||||| ||| ||||||||||||||||||||| || || || |||| || || ||| Sbjct 688537 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 688478 Query 16004 TCCATAAAATCAAAAGGATTTTT-----TGAACAATAGTATTTATCGCATCCCAATTCCA 16058 |||||||| || || || || | |||||| || ||| || || | | Sbjct 688477 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGC-----TTTTCGTTACCTAAGGCAA 688423 Query 16059 ACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTA 16118 ||||||||||| || |||||||| | ||| || ||||||| |||| ||||| || | Sbjct 688422 CTAATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAA 688363 Query 16119 TTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGA 16178 |||| ||| || || || || || | | ||||| || | ||| |||||| | Sbjct 688362 GTAATGCAACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAGCTTCAGCAA 688303 Query 16179 TTATATCTCTTACTACACTATTTAAC-GGAGGGTTTAATAAGTGTTTAAACATTATACAA 16237 | || ||| | | | || | | | || ||| |||||| |||| || ||| Sbjct 688302 TAAT-TCTTTCAATGATCTTTGGATCTGGCTTGTTCTTTAAGTGRGAGAACAATAGACAG 688244 Query 16238 GCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCT 16297 ||||| ||| ||| || ||||| || |||| || || ||||| || || || | ||| Sbjct 688243 GCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCA 688184 Query 16298 GGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATA 16357 ||||| | || ||| || | ||| || ||||| |||||||||||||| || || | | Sbjct 688183 GGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACA 688124 Query 16358 CCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatc 16417 |||||||| || ||||| ||||||| || ||| | || | ||| || ||| Sbjct 688123 CCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATC 688064 Query 16418 cattttttagcccaatttgctttttgtttAA-CACAGTTCATGTTCTCTATTGCATTAAA 16476 ||| | ||||||| | || |||| |||| ||| || | ||||| || || || Sbjct 688063 CATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAG-GAATAGTTTCTATAGCGTTTAA 688005 Query 16477 TAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTC 16536 ||| ||| ||||| || ||| || || || |||| || |||| ||| |||| Sbjct 688004 TAAGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGTTTC 687945 Query 16537 TGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTG 16596 || ||||| || ||||| || || ||||| || || || ||||||| | ||||| Sbjct 687944 AGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTG 687885 Query 16597 TACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAA 16656 ||||||| | || |||| | |||||||| || || || ||||| ||| ||||| Sbjct 687884 AACTTCAGCAGAGAARTTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAA 687825 Query 16657 AAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC--TGAAAGTTTTA-ACCAGTC 16713 || || | | | ||| ||| | |||| || || | | | ||| ||| || Sbjct 687824 GAAAGCCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATC 687765 Query 16714 AGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTT 16773 ||||| || || ||||||| ||||| | ||||| |||||||| | || | || Sbjct 687764 GTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCTT 687705 Query 16774 ATACATTTTCCATATGTCT 16792 ||| || ||| || ||| Sbjct 687704 ATAGGCTTCCCAAATTTCT 687686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511895934800