Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq12 122 7e-23
>seq12
Length=1055690
Score = 122 bits (134), Expect = 7e-23
Identities = 371/579 (64%), Gaps = 15/579 (3%)
Strand=Plus/Plus
Query 20213 AAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATG 20272
|||| || ||||| |||||||| ||||| || ||||||||||||||||| ||||||||||
Sbjct 820236 AAGAAGGTGATTTAGGTCCTGTTTATGGTTTCCAATGGAGACATTTTGGTGCTGAATATG 820295
Query 20273 TTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATT 20332
|||| |||| | || ||||| ||||||||| || | ||| ||
Sbjct 820296 TTGATTGTCACACTGACTACACAAACAAAGGATACGATCAATTAAGCGATATAATTCATA 820355
Query 20333 TAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATG 20392
| || || || || |||| |||||||| || | | || ||||| | |||
Sbjct 820356 AGTTGAAGACCAATCCTTACGATAGAAGAATCATCATGTCTGCTTGGAATCCACCAGACT 820415
Query 20393 TGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCT------- 20445
| ||||||| | || ||||| || | | || ||||| || ||| ||
Sbjct 820416 TTAAGAAAATGGCTCTTCCGCCATGCCACGTTTTCTGTCAATTCTATGTTTCTTTCCCTA 820475
Query 20446 --------AATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGG 20497
|| | ||||||| ||| | || ||| |||| ||||||||| |||
Sbjct 820476 AAGACCAAAAGCCTCAATTGTCATGTATCTTATACCAAAGATCTTGTGATATGGGGTTGG 820535
Query 20498 GTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557
||||||||||||| ||||| |||||| || | || ||||||||| | ||| |
Sbjct 820536 GTGTTCCTTTCAACATTGCTTCTTATGCTTTGTTGACCAGAATGATTGCAAAGGTTGTTG 820595
Query 20558 ATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATA 20617
|| | | ||||| || | |||||||| || || || || ||||| | |||
Sbjct 820596 ATATGGATTGTGGTGAATTTATTCACACCATGGGTGATGCTCACGTTTACAAGGAYCATG 820655
Query 20618 TAGAACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTA 20677
|||| |||| ||| ||| | | || |||| | ||||||| ||| | || |
Sbjct 820656 TAGATGCTTTRAAAGAACAAMTTGAAAGAACTCCAAGAGAATTCCCTACTTTAGAAATAA 820715
Query 20678 CTCGAACTGTTAAAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATA 20737
|| | ||||||| ||| | ||||| || || ||||||| | ||| || |
Sbjct 820716 AAAGAGATATTAAAGACATTGATGATTTCAAGTTGGAAGATTTTGAAATCAAAGACTACA 820775
Query 20738 ATCCCCATAATTCAATTCCAATGGAAATGTCTGTTTAAT 20776
| || |||| || ||| ||| | ||| ||| ||||
Sbjct 820776 ACCCTTATAAGTCTATTAAGATGAAGATGAGTGTWTAAT 820814
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399183912429010
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |