Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq1 302 4e-77 >seq1 Length=1289090 Score = 302 bits (334), Expect = 4e-77 Identities = 600/873 (69%), Gaps = 19/873 (2%) Strand=Plus/Minus Query 13900 AATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTC 13959 |||||| || |||||||| ||| |||||| ||||||||||| || || ||||| | Sbjct 688550 AATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGC 688491 Query 13960 CAGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATA-AACACTTTATCACAAC 14018 | ||||| ||||||||||| || ||||| || || ||||| |||| || || || Sbjct 688490 TAAGGATATGTTTTCCATAAAGTCGAATGGGTTGGT-GACATTGAACAGCTTTTCGTTAC 688432 Query 14019 CTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAAT 14078 ||| | | || ||||||||| |||| || |||| |||||| ||||| |||| || Sbjct 688431 CTAAGGCAACTAATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCAT 688372 Query 14079 TCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAG 14138 ||||||| | || | || ||||| || || || ||||| || |||| Sbjct 688371 TCATACCAAGTAATGCAACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAG 688312 Query 14139 CCTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATT--TTAGATGTTTAAA 14196 | || ||||| | ||| || | || || | | || ||| || || Sbjct 688311 CTTCAGCAATAATTCTTTCAATGATCT--TTGGATCTGGCTTGTTCTTTAAGTGRGAGAA 688254 Query 14197 AATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAA 14256 | || ||| ||||| ||| ||| | || |||||||||| || | |||||| || || Sbjct 688253 CAATAGACAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAA 688194 Query 14257 TGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGA 14316 || || || |||||||| || ||| || ||||| || || ||||| ||||| || || Sbjct 688193 AGTCAAACCAGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGA 688134 Query 14317 AAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTT 14376 || || | || ||||| |||||||| || | | || ||| ||||| | || | || Sbjct 688133 GAAAAAGACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTT 688074 Query 14377 GT-TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAA 14435 | | || |||||| | |||||||||||| |||| ||||| | || ||||| | Sbjct 688073 ATCTTGA-ATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTA 688015 Query 14436 TAGCATTAAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATC-AATAAGTA 14492 |||| || ||||| || || || || | | |||| |||||||| || ||||| || Sbjct 688014 TAGCGTTTAATAAGAAATCATTTTCCTTTGGATCCTTG--ATGTATGTGTCTAATAA-TA 687958 Query 14493 AGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAG 14552 | ||| |||||||||| ||||||||||| || || ||||| || ||||| ||| Sbjct 687957 AAGAATAAGTTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAG 687898 Query 14553 CTTCTGACCATTGTACCTCTG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCA 14611 |||||| ||| || || | || || | |||| |||| |||||||| || |||||| Sbjct 687897 CTTCTGGAATTTGAACTTCAGCAGAGAART-TTTCAACCAAGTTTTCATTGACAATACCA 687839 Query 14612 TCACTAGCTGCAAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGCTG 14668 ||| ||| ||||| || ||||| | || ||| ||| | || | | |||||| | Sbjct 687838 TCAGAAGCAGCAAAGAAAGCCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATT 687779 Query 14669 AGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTA 14728 || ||||||||| |||||||||||| | ||| | ||| ||| | ||||| ||| | Sbjct 687778 CTGTTATTCCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAA 687719 Query 14729 GCAACAGCTTTTTTATACATTACCCATATTTCT 14761 || | ||| | ||||| | |||| |||||| Sbjct 687718 GCTTCGGCTCTCTTATAGGCTTCCCAAATTTCT 687686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345491472240