Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq1 302 4e-77
>seq1
Length=1289090
Score = 302 bits (334), Expect = 4e-77
Identities = 600/873 (69%), Gaps = 19/873 (2%)
Strand=Plus/Minus
Query 13900 AATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTC 13959
|||||| || |||||||| ||| |||||| ||||||||||| || || ||||| |
Sbjct 688550 AATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGC 688491
Query 13960 CAGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATA-AACACTTTATCACAAC 14018
| ||||| ||||||||||| || ||||| || || ||||| |||| || || ||
Sbjct 688490 TAAGGATATGTTTTCCATAAAGTCGAATGGGTTGGT-GACATTGAACAGCTTTTCGTTAC 688432
Query 14019 CTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAAT 14078
||| | | || ||||||||| |||| || |||| |||||| ||||| |||| ||
Sbjct 688431 CTAAGGCAACTAATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCAT 688372
Query 14079 TCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAG 14138
||||||| | || | || ||||| || || || ||||| || ||||
Sbjct 688371 TCATACCAAGTAATGCAACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAG 688312
Query 14139 CCTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATT--TTAGATGTTTAAA 14196
| || ||||| | ||| || | || || | | || ||| || ||
Sbjct 688311 CTTCAGCAATAATTCTTTCAATGATCT--TTGGATCTGGCTTGTTCTTTAAGTGRGAGAA 688254
Query 14197 AATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAA 14256
| || ||| ||||| ||| ||| | || |||||||||| || | |||||| || ||
Sbjct 688253 CAATAGACAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAA 688194
Query 14257 TGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGA 14316
|| || || |||||||| || ||| || ||||| || || ||||| ||||| || ||
Sbjct 688193 AGTCAAACCAGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGA 688134
Query 14317 AAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTT 14376
|| || | || ||||| |||||||| || | | || ||| ||||| | || | ||
Sbjct 688133 GAAAAAGACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTT 688074
Query 14377 GT-TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAA 14435
| | || |||||| | |||||||||||| |||| ||||| | || ||||| |
Sbjct 688073 ATCTTGA-ATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTA 688015
Query 14436 TAGCATTAAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATC-AATAAGTA 14492
|||| || ||||| || || || || | | |||| |||||||| || ||||| ||
Sbjct 688014 TAGCGTTTAATAAGAAATCATTTTCCTTTGGATCCTTG--ATGTATGTGTCTAATAA-TA 687958
Query 14493 AGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAG 14552
| ||| |||||||||| ||||||||||| || || ||||| || ||||| |||
Sbjct 687957 AAGAATAAGTTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAG 687898
Query 14553 CTTCTGACCATTGTACCTCTG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCA 14611
|||||| ||| || || | || || | |||| |||| |||||||| || ||||||
Sbjct 687897 CTTCTGGAATTTGAACTTCAGCAGAGAART-TTTCAACCAAGTTTTCATTGACAATACCA 687839
Query 14612 TCACTAGCTGCAAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGCTG 14668
||| ||| ||||| || ||||| | || ||| ||| | || | | |||||| |
Sbjct 687838 TCAGAAGCAGCAAAGAAAGCCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATT 687779
Query 14669 AGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTA 14728
|| ||||||||| |||||||||||| | ||| | ||| ||| | ||||| ||| |
Sbjct 687778 CTGTTATTCCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAA 687719
Query 14729 GCAACAGCTTTTTTATACATTACCCATATTTCT 14761
|| | ||| | ||||| | |||| ||||||
Sbjct 687718 GCTTCGGCTCTCTTATAGGCTTCCCAAATTTCT 687686
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482345491472240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |