Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq16 98.7 8e-16
seq15 91.5 1e-13
>seq16
Length=726111
Score = 98.7 bits (108), Expect = 8e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182
|| || || |||||||||||||||||||| || | | |||| ||| |||||| ||||||
Sbjct 202542 TGGAGAGTGGATTCTTTTTGAATGTTGTAATCAGATAATGTTCTACCATCTTCTAATTGT 202483
Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGT 18242
|| || || | || | |||||||||||| || | ||||||||||| ||||
Sbjct 202482 TTACCGGCGAAAATCAATCTTTGTTGATCAGGAGGAATACCTTCCTTATCTTGGATTTTA 202423
Query 18243 TGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTC 18302
||||| | | || ||||| | || ||| | |||||| | || || ||
Sbjct 202422 GATTTGACAGCGTCGATAGAGTCACTAGATTCAACTTCTAAAGTGATGGTCTTACCAGTT 202363
Query 18303 AATGTTTTTACAAAAATTTGCATT 18326
|| ||||| ||||| |||||||||
Sbjct 202362 AAAGTTTTAACAAAGATTTGCATT 202339
>seq15
Length=137011
Score = 91.5 bits (100), Expect = 1e-13
Identities = 145/208 (70%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169
||| || || | ||| || || ||||||||||| |||||||| || | | ||| |||
Sbjct 38899 TCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAGATAAGGTTCTACC 38958
Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229
||||| |||||||| || ||| |||| | |||||||||||| || | ||||||||
Sbjct 38959 GTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTT 39018
Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289
|| || | |||||| ||| ||| ||| | | ||| ||| | |||||
Sbjct 39019 GTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATTCGACTTCCAAAGTGAT 39078
Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAA 18317
| | || ||||| || || || ||||||
Sbjct 39079 GGTCTTACCGGTTAAGGTCTTGACAAAA 39106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343916781410
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |