Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1 145 2e-29 seq12 93.3 8e-14 >seq1 Length=1289090 Score = 145 bits (160), Expect = 2e-29 Identities = 496/756 (66%), Gaps = 40/756 (5%) Strand=Plus/Plus Query 101620 TTTCATTCTCCAGATTCT-GGCGTTCTTTGCATCCTCTGACGGAATTGTAATTGAAAATC 101678 ||||||| || ||| | | ||| |||||||| | ||||| || ||||| | |||||| Sbjct 687800 TTTCATT-TCAAGAGTMTTGGCTTTCTTTGCTGCTTCTGATGGTATTGTCAATGAAAACT 687858 Query 101679 T--TACAACACGTCTTCG-TCAAGTGGCGCAGATTCCAGAAGCGAGGAGTTTCTTTGACT 101735 | | || | ||| | | |||| || ||||||||||| | | |||||| | | Sbjct 687859 TGGTTGAAAAYTTCTCTGCTGAAGTT---CAAATTCCAGAAGCTAAGTGTTTCTACGGTT 687915 Query 101736 TCCAAGTTGGAATGGAGAGTATTCATG--GCAACGTCTACGGAGAACTGATTGATAGACT 101793 ||||| || ||||| | ||||| | ||| | | | | ||| ||||| Sbjct 687916 TCCAAATTATGATGGAAAACATTCACTCTGAAACTTATTCT------TTATTATTAGACA 687969 Query 101794 GGTGCC-CGACGA---AAAAGACAAGGCTATCTTGTTTAACGCTGCACAACACT-TCCCC 101848 | | | | || ||| || || | | |||| || |||||| | || ||| | || Sbjct 687970 CATACATCAAGGATCCAAAGGAAAATGATTTCTTATTAAACGCTATAGAA-ACTATTCCT 688028 Query 101849 GCCATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGATTTG--- 101905 | || ||| | |||| | |||||||||| ||||| ||| || ||| |||| Sbjct 688029 GAAATTAAGGAAAAGGCTGAATGGGCTATTAGATGGATTCAAGATAAGGACGCTTTGTTT 688088 Query 101906 GCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCA 101965 || ||| | | ||||| |||||||| |||||||| |||| || |||| |||| || Sbjct 688089 GCTGAAAGACTGGTTGCTTTTGCTGCTGTTGAAGGTGTCTTTTTCTCTGGTTCATTTGCT 688148 Query 101966 TCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTC 102025 | || |||||| | ||||| | |||| | |||||||| | || | |||||| || || Sbjct 688149 GCTATCTTCTGGTTGAAGAAAAAGGGTTTGATGCCTGGTTTGACTTTCTCCAACGAATTG 688208 Query 102026 ATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTT 102085 || | ||| || |||||| | ||| |||||||| || | |||| | Sbjct 688209 ATCTGTAGAGATGAAGGTTTACATACTGACTTTGCCTGTCTATTGTTCTCYCAC------ 688262 Query 102086 GTTGATACCCCATCAAGAGA-AAGGATTCTTGAAA---TTGTCACTGAAGCCGTCCGAAT 102141 || | | | | ||| || ||| |||||| || | ||||||| || ||| Sbjct 688263 -TTAAAGAACAAGCCAGATCCAAAGATCATTGAAAGAATTATTGCTGAAGCTGTTGAAAT 688321 Query 102142 TGAACAAGAATTTCTCACA-GTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGT 102200 |||| |||| | || | | || | || ||| |||| | || ||||| ||| | Sbjct 688322 TGAA-AAGAGATACTTTGTTGATGCCATTCCAGTTGCATTACTTGGTATGAA-TGCTGAT 688379 Query 102201 -TGATGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAA 102259 | |||| ||| || |||||||||| || |||| | |||| |||| | || ||| Sbjct 688380 CTAATGAACCAATATGTTGAATTTGTTGCTGATAGATTATTAGTTGCCTTAGGTAACGAA 688439 Query 102260 AAGCACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAG 102319 |||| | ||||| |||||||| ||| || ||||| || || ||| | | |||| Sbjct 688440 AAGCTGTTCAATGTCACCAACCCATTCGACTTTATGGAAAACATATCCTTAGCTGGTAAG 688499 Query 102320 ACCAACTTTTTTGAAAAGAGAGTCGCCGAGTATCAA 102355 ||||| || |||||||||||||| | || |||||| Sbjct 688500 ACCAATTTCTTTGAAAAGAGAGTTTCTGATTATCAA 688535 >seq12 Length=1055690 Score = 93.3 bits (102), Expect = 8e-14 Identities = 174/248 (70%), Gaps = 6/248 (2%) Strand=Plus/Plus Query 35375 GGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCAT 35434 |||||| || |||| ||| || ||||| || || || || || ||||||||| | ||| Sbjct 820220 GGGTTAACTGACAGAGAAGAAGGTGATTTAGGTCCTGTTTATGGTTTCCAATGGAGACAT 820279 Query 35435 TTTGGTGCTGAATATGATACCTGTTCTTCCGATTATAC-TGGAAAGGGTATTGATCAATT 35493 |||||||||||||||| | ||| | || || || ||||| || |||||||| Sbjct 820280 TTTGGTGCTGAATATGTTGATTGTCACACTGACTACACAAACAAAGGATA-CGATCAATT 820338 Query 35494 GGCCAATATACTAAAGACCCTGAGAGA-AAATCCAGATGATAGAAGGATGATTATGACGG 35552 | ||||| | | | ||| ||| ||||| | |||||||| || || ||| | | Sbjct 820339 AAGCGATATAATTCATAAGTTGA-AGACCAATCCTTACGATAGAAGAATCATCATGTCTG 820397 Query 35553 CATGGAATCCTATGGATCTTCACCTTATGGCTCTTCCTCCATGCCAC-ATGACTGCTCAA 35611 | |||||||| || || | ||||||||||| ||||||||| | ||| |||| Sbjct 820398 CTTGGAATCCACCAGACTTTAAGAAAATGGCTCTTCCGCCATGCCACGTTTTCTG-TCAA 820456 Query 35612 TTTTATGT 35619 || ||||| Sbjct 820457 TTCTATGT 820464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583771777190