Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq14 416 4e-111 seq1 183 4e-41 >seq14 Length=1507144 Score = 416 bits (460), Expect = 4e-111 Identities = 1481/2291 (65%), Gaps = 61/2291 (3%) Strand=Plus/Plus Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105 ||||||||||| | || || || | || || | | |||||||| || || || | | Sbjct 780196 GTGAATTGAATAGCGGCTGAGGCAGCTTGTGTTCTCAAGTAGTACATACCAGTCTTCAAA 780255 Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATC-TGCTA 62163 || ||||| ||||| || ||||| |||| || ||| | || | || | Sbjct 780256 CCCTTGCTCCAACCGTAGAAGTGCATGGAAGTTAACTTACCCATAGTTGGGGCCATG--A 780313 Query 62164 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 62223 | || || ||||| || ||| |||||| ||||| ||| || || || ||||| | | Sbjct 780314 TGTGAATGTTCATGGAATGAGATTGATCAATGAAAGCTTGTCTATCAGCGGCCATATCAA 780373 Query 62224 TGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 62282 |||| |||||||||| | |||||||| ||||||||| || || ||| || |||| ||| Sbjct 780374 TGATAGTCTTTTGTGATAATTCCCAAACAGTTTTATACAAATC-CTTCATTTCTTGAGGA 780432 Query 62283 AGGTTTGT--ATTCT-GAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCA 62339 | ||||| ||| | | || || ||| | | || || || ||| || | ||| Sbjct 780433 ATGTTTGGCAATTGTTGGATAGAACCATTGTTAGCAATGATATTAGACTTCATGGCTTCA 780492 Query 62340 TTCCATAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTC 62398 | ||| ||| | | || |||| | | | | | ||||| || | |||| |||| Sbjct 780493 TCCCA-AATACCCATATCAACTAAATCCTTCAATAAGTATGGGTTGACAATTTGGTATTC 780551 Query 62399 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATT 62458 ||||| || ||| | || ||| || ||| || | ||||| | | ||||| | Sbjct 780552 ACCAGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGGTTCGAAACATTCATTGTA 780611 Query 62459 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAG 62518 || |||||||| | ||| || ||||| |||||||| || |||||||| ||||| | Sbjct 780612 ACCTAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAA 780671 Query 62519 ACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAAC 62578 ||||| | || ||| | || | | ||||| ||| | | || |||| Sbjct 780672 ACCGTGCTTGGCAATCTTAGCCTTCAATTCAGTCCAATCCCATARGGTAGTTGGAGCAAC 780731 Query 62579 ANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCATA 62638 ||||||| || ||| | | || || ||| | || | | |||| Sbjct 780732 GTTCCAGAAATCGTATTGTAAAACACCTTGAGAAGCTGGAGAACCTTCGTAAGAAGCATA 780791 Query 62639 TGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTTC 62698 | |||||| | ||||||| || | || || || ||| ||| |||||||||||| Sbjct 780792 GGTTCCTTCAATTTCAGCTAATTCAGTGGAAGCTTCCAAAGCAGCGTGATAAATGGTTTC 780851 Query 62699 AAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAAT 62758 || || | | || | || | |||| ||| |||||| |||| | || Sbjct 780852 GAAAATTTGAATGTTCAATTCYTTGGCTTTTTCAGAATCGAATGGAACTCTTAACATCAT 780911 Query 62759 AAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGAT 62818 ||| | || || || ||||||||||| | | |||||||| |||||| | ||||| | Sbjct 780912 AAAAGTATCAGCCAAACCTTGAACACCTACGGCAATAGGTCTGTGTCTCATGTTAGATCT 780971 Query 62819 TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGA-CAA 62877 | ||| | || ||| ||||| || | || |||| || | | |||| | ||| Sbjct 780972 TCTAGCAGTTTCAACAGGGTAATAGTTTCTGTCAATAACAGCGTTTA-AGTTCTTAGCAA 781030 Query 62878 TTACTTTGACCACATCCTTCAGTTTGAGAAAATC--AAATC---GCCC----ATCTA--- 62925 | || || || || | ||||| || || || | | | |||| Sbjct 781031 TAACCTTACAAACTTCGTGAAGTTTTTTGAAGTCGTAAGTTTGAGTCTTTTGATCTTCKG 781090 Query 62926 ------TTACAAACA-TGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTA 62978 ||||||| || | || |||||||| || | ||||| || || || ||| Sbjct 781091 AGACCTTTACAAAGGCTGGT-AAGGCAACAGARGCTAAGTTACAAACAGCAGTTTCCTTA 781149 Query 62979 GCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTT 63038 |||| | |||| | || ||| || | ||| | | || || || || || || Sbjct 781150 TCATCTGAGTATTCAACAATTTCACAACATAAGTTAGAAGATTTAATTGTACCCAAGTTC 781209 Query 63039 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCA 63098 | ||||||| ||||| ||||| |||||||| |||| |||||| |||||||||||||| Sbjct 781210 TTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAAGGAGTACCAGTTTCG 781269 Query 63099 ATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTA--TC 63156 | || | ||||| || || | ||| | | ||||||| || | ||| || || Sbjct 781270 GTTTGGGCTTCTAAGATGGCGTACCATAACTTTTGAGCCTTGATGGT--CTTTCTACCTC 781327 Query 63157 TCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 63216 | | |||| ||||||| | ||| | ||| || || || || || ||| || Sbjct 781328 TACCTTCTAGTTCGTATTGGTCATAWAGCTTTTCAAAGTCATCACCATAAGCATCRCTCA 781387 Query 63217 ATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 63276 | | |||| |||| ||| | | || | ||| || || | |||| |||| |||| Sbjct 781388 AACCAGGAGCTTCACTAGGAGAGAATAAAGTCCAATCACCATTTGCCTTGACTCTCTTCA 781447 Query 63277 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTC 63336 | || | ||||||||||| | |||| |||| |||||| | ||| ||| || || | Sbjct 781448 TGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCTTCCTTAC 781507 Query 63337 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 63396 | ||| ||| | | |||| ||| | | |||||||| ||||| ||||| | ||| | Sbjct 781508 CGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCCATGGTTCTAGGTACA 781567 Query 63397 TGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 63456 || | | ||||| | |||||| || || ||||| | ||||| || ||||| || Sbjct 781568 GAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACATATCTGGCAGTGTTGTTGA 781627 Query 63457 AAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTC 63516 ||||||| | ||| ||||| | ||| || || ||||||||||||| | || || | Sbjct 781628 AAACTCTAACCATAGGAATCAAACCATTGGAAGTACCATTGGTACCAGCAATGTAAGAGC 781687 Query 63517 CACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63576 || ||| | || || ||| || ||| || || || || | ||||| ||| | Sbjct 781688 CAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCKGCAGTCTTAGAAATTTGAG 781747 Query 63577 CGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAA 63636 | ||| || || || |||||||| || || || |||||| |||| || || | Sbjct 781748 CACATTCCTTYAAGGTATCATAGATACCGTCAATAGAATCATCCTTCATAGAAATTAAGA 781807 Query 63637 AACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 63696 |||| ||||||||| | | | ||| || ||||| |||| || |||||||| || | Sbjct 781808 AACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAAGCATGGG 781867 Query 63697 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT-ATCCCATTGA 63755 |||| || ||| ||| | | ||||| || || || || || || | || | Sbjct 781868 TAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTTCAATGTTTTCACCG- 781926 Query 63756 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTT 63815 || || || || || || | ||| | || || || ||||||||||| || || || Sbjct 781927 TGGATACCAACAGCAACTCTCATRATCAAATGTTGTGGTCTTTCAACGATCTTACCATTG 781986 Query 63816 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGT 63873 || ||||| ||||| ||| ||||||| || || ||||||||||||||||| ||||| | Sbjct 781987 ATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAGTTGAAA--T 782044 Query 63874 CTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAAC-----TATATC 63928 ||| || | |||||| | || | |||| || | ||| |||| |||| Sbjct 782045 CTCTATCRAAGATAATAGTAGCATCTAAGGTATCTTTGTGTTTCATAACGGTTTTATAAA 782104 Query 63929 CATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAA 63988 ||| | | ||||| || ||||| |||||| | ||||| |||||| | Sbjct 782105 CATCATCA-----GAAATCATTGGAGACAAAACACCATTTCTTTCGTTAACGTAGTTGTA 782159 Query 63989 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGC 64048 ||| || || || |||| | ||||| |||||| |||| |||||||| || ||||| Sbjct 782160 TAAGTCTTCGATAACTTGAGAAAATAATTTTTTGGTTTGCTTGTGTAAGTTACTGATGGC 782219 Query 64049 TATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTATTT 64107 ||||||||||| |||| |||||||| ||||| || || || || ||| ||| Sbjct 782220 AATTCTGGCGGCAAGAACAGCATAATCAGGATGAACAGTGGT-CATGTAGGCACAAGTTT 782278 Query 64108 CGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCT 64167 | || || | | || ||||| | || || || || | || | || |||| | Sbjct 782279 CAGCGGCTAAGTTATCTAATTCGATGGTAGTAACACCTTCGTAGACACCGGAGATAA--T 782336 Query 64168 TCAT--AGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAGCACAATTTTCT 64225 || | | ||||| | |||||| ||||| | | | ||| |||||||| ||| | Sbjct 782337 TCTTTGGGTGATTTTGACAGGATCGATATGTTTAGCATCTAATCCATAGCATAATCTAGC 782396 Query 64226 AATACGAGACGTGATTTTATCAAACATGACATTTTCCTTGT-ATCCATTTCGTTTAATGA 64284 ||| | || || ||||||||||| ||| | ||| | ||| | || ||||| | Sbjct 782397 AATTCTGGATGTAATTTTATCAAA-TTGAACTGGAACTTTTCTTCCGTCTCTTTTAACAA 782455 Query 64285 CAAACATTTTT 64295 ||||||| ||| Sbjct 782456 CAAACATGTTT 782466 >seq1 Length=1289090 Score = 183 bits (202), Expect = 4e-41 Identities = 574/883 (65%), Gaps = 10/883 (1%) Strand=Plus/Minus Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350 ||||| || ||| || | ||||| || ||||| || || || | || ||||| ||| Sbjct 688537 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 688478 Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410 ||||| || || || || ||||| |||||| | | |||| || || || | Sbjct 688477 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTTACCTAAGGCAACTAAT 688418 Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470 |||||||| || || ||||| | |||| ||||| | ||| |||||| || | | | Sbjct 688417 AATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAAT 688358 Query 33471 TTAACTGGAAGAGCCACAGTAAGAAAT-TCTTGTTCAATGGATACCGCATTTGTTATAAT 33529 |||||||| || || || || |||| |||||| || || | | ||||| Sbjct 688357 GCAACTGGAATGGCATCAACAAAGTATCTCTT-TTCAATTTCAACAGCTTCAGCAATAAT 688299 Query 33530 AAATCTAACGGTTTCTTCA-CTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGA 33588 | || | | | | | || | | | | | ||| || |||| | ||| || | Sbjct 688298 TCTTTCAATGATCTTTGGATCTGGCTTGTTCTT-TAAGTGRGAGAACAATAGACAGGCAA 688240 Query 33589 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCA 33648 | || || | ||| || ||||||| || |||||||| || || || | || |||| Sbjct 688239 AGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAGGCA 688180 Query 33649 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTT 33708 | | || || || | ||| || || | ||| ||||| || || || |||| |||| Sbjct 688179 TCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACACCTT 688120 Query 33709 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACT 33765 | || |||||||| |||| ||||| || || | | || | | || || ||||| Sbjct 688119 CAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATCCATC 688060 Query 33766 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33825 | |||||| || ||||| | || | ||| || |||||||| || || || | Sbjct 688059 TAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTTAATAAGA 688000 Query 33826 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33885 | | ||||| || ||| || | || || || | || | | ||| |||| || | Sbjct 687999 AATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGTTTCAGAGT 687940 Query 33886 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 33945 |||||||||| || || || || ||||||||||| |||| || | ||| || |||| Sbjct 687939 GAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTGAACTT 687880 Query 33946 CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACG 34005 | | | | || ||| | || |||||||| || || |||||| || ||||| || | Sbjct 687879 CAGCAGAGAARTTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAAGAAAG 687820 Query 34006 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATTGA 34062 |||| || | || ||| || |||| | | | | | ||||||||||| | | Sbjct 687819 CCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATCGTGTA 687760 Query 34063 TATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 34122 ||| ||||| | ||| | |||||| | ||||| || || || || || | ||||| Sbjct 687759 AATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCTTATAGG 687700 Query 34123 TATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 34165 | ||| || || | ||| ||||||||| | ||| ||||| Sbjct 687699 CTTCCCAAATTTCTGGGAATTTGATTGGGAATAAAACGAATCT 687657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817458291040