Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq14 416 4e-111
seq1 183 4e-41
>seq14
Length=1507144
Score = 416 bits (460), Expect = 4e-111
Identities = 1481/2291 (65%), Gaps = 61/2291 (3%)
Strand=Plus/Plus
Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105
||||||||||| | || || || | || || | | |||||||| || || || | |
Sbjct 780196 GTGAATTGAATAGCGGCTGAGGCAGCTTGTGTTCTCAAGTAGTACATACCAGTCTTCAAA 780255
Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATC-TGCTA 62163
|| ||||| ||||| || ||||| |||| || ||| | || | || |
Sbjct 780256 CCCTTGCTCCAACCGTAGAAGTGCATGGAAGTTAACTTACCCATAGTTGGGGCCATG--A 780313
Query 62164 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 62223
| || || ||||| || ||| |||||| ||||| ||| || || || ||||| | |
Sbjct 780314 TGTGAATGTTCATGGAATGAGATTGATCAATGAAAGCTTGTCTATCAGCGGCCATATCAA 780373
Query 62224 TGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 62282
|||| |||||||||| | |||||||| ||||||||| || || ||| || |||| |||
Sbjct 780374 TGATAGTCTTTTGTGATAATTCCCAAACAGTTTTATACAAATC-CTTCATTTCTTGAGGA 780432
Query 62283 AGGTTTGT--ATTCT-GAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCA 62339
| ||||| ||| | | || || ||| | | || || || ||| || | |||
Sbjct 780433 ATGTTTGGCAATTGTTGGATAGAACCATTGTTAGCAATGATATTAGACTTCATGGCTTCA 780492
Query 62340 TTCCATAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTC 62398
| ||| ||| | | || |||| | | | | | ||||| || | |||| ||||
Sbjct 780493 TCCCA-AATACCCATATCAACTAAATCCTTCAATAAGTATGGGTTGACAATTTGGTATTC 780551
Query 62399 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATT 62458
||||| || ||| | || ||| || ||| || | ||||| | | ||||| |
Sbjct 780552 ACCAGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGGTTCGAAACATTCATTGTA 780611
Query 62459 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAG 62518
|| |||||||| | ||| || ||||| |||||||| || |||||||| ||||| |
Sbjct 780612 ACCTAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAA 780671
Query 62519 ACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAAC 62578
||||| | || ||| | || | | ||||| ||| | | || ||||
Sbjct 780672 ACCGTGCTTGGCAATCTTAGCCTTCAATTCAGTCCAATCCCATARGGTAGTTGGAGCAAC 780731
Query 62579 ANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCATA 62638
||||||| || ||| | | || || ||| | || | | ||||
Sbjct 780732 GTTCCAGAAATCGTATTGTAAAACACCTTGAGAAGCTGGAGAACCTTCGTAAGAAGCATA 780791
Query 62639 TGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTTC 62698
| |||||| | ||||||| || | || || || ||| ||| ||||||||||||
Sbjct 780792 GGTTCCTTCAATTTCAGCTAATTCAGTGGAAGCTTCCAAAGCAGCGTGATAAATGGTTTC 780851
Query 62699 AAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAAT 62758
|| || | | || | || | |||| ||| |||||| |||| | ||
Sbjct 780852 GAAAATTTGAATGTTCAATTCYTTGGCTTTTTCAGAATCGAATGGAACTCTTAACATCAT 780911
Query 62759 AAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGAT 62818
||| | || || || ||||||||||| | | |||||||| |||||| | ||||| |
Sbjct 780912 AAAAGTATCAGCCAAACCTTGAACACCTACGGCAATAGGTCTGTGTCTCATGTTAGATCT 780971
Query 62819 TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGA-CAA 62877
| ||| | || ||| ||||| || | || |||| || | | |||| | |||
Sbjct 780972 TCTAGCAGTTTCAACAGGGTAATAGTTTCTGTCAATAACAGCGTTTA-AGTTCTTAGCAA 781030
Query 62878 TTACTTTGACCACATCCTTCAGTTTGAGAAAATC--AAATC---GCCC----ATCTA--- 62925
| || || || || | ||||| || || || | | | ||||
Sbjct 781031 TAACCTTACAAACTTCGTGAAGTTTTTTGAAGTCGTAAGTTTGAGTCTTTTGATCTTCKG 781090
Query 62926 ------TTACAAACA-TGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTA 62978
||||||| || | || |||||||| || | ||||| || || || |||
Sbjct 781091 AGACCTTTACAAAGGCTGGT-AAGGCAACAGARGCTAAGTTACAAACAGCAGTTTCCTTA 781149
Query 62979 GCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTT 63038
|||| | |||| | || ||| || | ||| | | || || || || || ||
Sbjct 781150 TCATCTGAGTATTCAACAATTTCACAACATAAGTTAGAAGATTTAATTGTACCCAAGTTC 781209
Query 63039 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCA 63098
| ||||||| ||||| ||||| |||||||| |||| |||||| ||||||||||||||
Sbjct 781210 TTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAAGGAGTACCAGTTTCG 781269
Query 63099 ATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTA--TC 63156
| || | ||||| || || | ||| | | ||||||| || | ||| || ||
Sbjct 781270 GTTTGGGCTTCTAAGATGGCGTACCATAACTTTTGAGCCTTGATGGT--CTTTCTACCTC 781327
Query 63157 TCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 63216
| | |||| ||||||| | ||| | ||| || || || || || ||| ||
Sbjct 781328 TACCTTCTAGTTCGTATTGGTCATAWAGCTTTTCAAAGTCATCACCATAAGCATCRCTCA 781387
Query 63217 ATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 63276
| | |||| |||| ||| | | || | ||| || || | |||| |||| ||||
Sbjct 781388 AACCAGGAGCTTCACTAGGAGAGAATAAAGTCCAATCACCATTTGCCTTGACTCTCTTCA 781447
Query 63277 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTC 63336
| || | ||||||||||| | |||| |||| |||||| | ||| ||| || || |
Sbjct 781448 TGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCTTCCTTAC 781507
Query 63337 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 63396
| ||| ||| | | |||| ||| | | |||||||| ||||| ||||| | ||| |
Sbjct 781508 CGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCCATGGTTCTAGGTACA 781567
Query 63397 TGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 63456
|| | | ||||| | |||||| || || ||||| | ||||| || ||||| ||
Sbjct 781568 GAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACATATCTGGCAGTGTTGTTGA 781627
Query 63457 AAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTC 63516
||||||| | ||| ||||| | ||| || || ||||||||||||| | || || |
Sbjct 781628 AAACTCTAACCATAGGAATCAAACCATTGGAAGTACCATTGGTACCAGCAATGTAAGAGC 781687
Query 63517 CACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63576
|| ||| | || || ||| || ||| || || || || | ||||| ||| |
Sbjct 781688 CAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCKGCAGTCTTAGAAATTTGAG 781747
Query 63577 CGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAA 63636
| ||| || || || |||||||| || || || |||||| |||| || || |
Sbjct 781748 CACATTCCTTYAAGGTATCATAGATACCGTCAATAGAATCATCCTTCATAGAAATTAAGA 781807
Query 63637 AACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 63696
|||| ||||||||| | | | ||| || ||||| |||| || |||||||| || |
Sbjct 781808 AACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAAGCATGGG 781867
Query 63697 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT-ATCCCATTGA 63755
|||| || ||| ||| | | ||||| || || || || || || | || |
Sbjct 781868 TAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTTCAATGTTTTCACCG- 781926
Query 63756 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTT 63815
|| || || || || || | ||| | || || || ||||||||||| || || ||
Sbjct 781927 TGGATACCAACAGCAACTCTCATRATCAAATGTTGTGGTCTTTCAACGATCTTACCATTG 781986
Query 63816 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGT 63873
|| ||||| ||||| ||| ||||||| || || ||||||||||||||||| ||||| |
Sbjct 781987 ATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAGTTGAAA--T 782044
Query 63874 CTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAAC-----TATATC 63928
||| || | |||||| | || | |||| || | ||| |||| ||||
Sbjct 782045 CTCTATCRAAGATAATAGTAGCATCTAAGGTATCTTTGTGTTTCATAACGGTTTTATAAA 782104
Query 63929 CATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAA 63988
||| | | ||||| || ||||| |||||| | ||||| |||||| |
Sbjct 782105 CATCATCA-----GAAATCATTGGAGACAAAACACCATTTCTTTCGTTAACGTAGTTGTA 782159
Query 63989 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGC 64048
||| || || || |||| | ||||| |||||| |||| |||||||| || |||||
Sbjct 782160 TAAGTCTTCGATAACTTGAGAAAATAATTTTTTGGTTTGCTTGTGTAAGTTACTGATGGC 782219
Query 64049 TATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTATTT 64107
||||||||||| |||| |||||||| ||||| || || || || ||| |||
Sbjct 782220 AATTCTGGCGGCAAGAACAGCATAATCAGGATGAACAGTGGT-CATGTAGGCACAAGTTT 782278
Query 64108 CGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCT 64167
| || || | | || ||||| | || || || || | || | || |||| |
Sbjct 782279 CAGCGGCTAAGTTATCTAATTCGATGGTAGTAACACCTTCGTAGACACCGGAGATAA--T 782336
Query 64168 TCAT--AGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAGCACAATTTTCT 64225
|| | | ||||| | |||||| ||||| | | | ||| |||||||| ||| |
Sbjct 782337 TCTTTGGGTGATTTTGACAGGATCGATATGTTTAGCATCTAATCCATAGCATAATCTAGC 782396
Query 64226 AATACGAGACGTGATTTTATCAAACATGACATTTTCCTTGT-ATCCATTTCGTTTAATGA 64284
||| | || || ||||||||||| ||| | ||| | ||| | || ||||| |
Sbjct 782397 AATTCTGGATGTAATTTTATCAAA-TTGAACTGGAACTTTTCTTCCGTCTCTTTTAACAA 782455
Query 64285 CAAACATTTTT 64295
||||||| |||
Sbjct 782456 CAAACATGTTT 782466
>seq1
Length=1289090
Score = 183 bits (202), Expect = 4e-41
Identities = 574/883 (65%), Gaps = 10/883 (1%)
Strand=Plus/Minus
Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350
||||| || ||| || | ||||| || ||||| || || || | || ||||| |||
Sbjct 688537 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 688478
Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410
||||| || || || || ||||| |||||| | | |||| || || || |
Sbjct 688477 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTTACCTAAGGCAACTAAT 688418
Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470
|||||||| || || ||||| | |||| ||||| | ||| |||||| || | | |
Sbjct 688417 AATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAAT 688358
Query 33471 TTAACTGGAAGAGCCACAGTAAGAAAT-TCTTGTTCAATGGATACCGCATTTGTTATAAT 33529
|||||||| || || || || |||| |||||| || || | | |||||
Sbjct 688357 GCAACTGGAATGGCATCAACAAAGTATCTCTT-TTCAATTTCAACAGCTTCAGCAATAAT 688299
Query 33530 AAATCTAACGGTTTCTTCA-CTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGA 33588
| || | | | | | || | | | | | ||| || |||| | ||| || |
Sbjct 688298 TCTTTCAATGATCTTTGGATCTGGCTTGTTCTT-TAAGTGRGAGAACAATAGACAGGCAA 688240
Query 33589 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCA 33648
| || || | ||| || ||||||| || |||||||| || || || | || ||||
Sbjct 688239 AGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAGGCA 688180
Query 33649 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTT 33708
| | || || || | ||| || || | ||| ||||| || || || |||| ||||
Sbjct 688179 TCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACACCTT 688120
Query 33709 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACT 33765
| || |||||||| |||| ||||| || || | | || | | || || |||||
Sbjct 688119 CAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATCCATC 688060
Query 33766 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33825
| |||||| || ||||| | || | ||| || |||||||| || || || |
Sbjct 688059 TAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTTAATAAGA 688000
Query 33826 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33885
| | ||||| || ||| || | || || || | || | | ||| |||| || |
Sbjct 687999 AATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGTTTCAGAGT 687940
Query 33886 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 33945
|||||||||| || || || || ||||||||||| |||| || | ||| || ||||
Sbjct 687939 GAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTGAACTT 687880
Query 33946 CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACG 34005
| | | | || ||| | || |||||||| || || |||||| || ||||| || |
Sbjct 687879 CAGCAGAGAARTTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAAGAAAG 687820
Query 34006 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATTGA 34062
|||| || | || ||| || |||| | | | | | ||||||||||| | |
Sbjct 687819 CCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATCGTGTA 687760
Query 34063 TATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 34122
||| ||||| | ||| | |||||| | ||||| || || || || || | |||||
Sbjct 687759 AATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCTTATAGG 687700
Query 34123 TATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 34165
| ||| || || | ||| ||||||||| | ||| |||||
Sbjct 687699 CTTCCCAAATTTCTGGGAATTTGATTGGGAATAAAACGAATCT 687657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817458291040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |