Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq14 338 6e-88
seq1 253 2e-62
>seq14
Length=1507144
Score = 338 bits (374), Expect = 6e-88
Identities = 1208/1873 (64%), Gaps = 55/1873 (3%)
Strand=Plus/Plus
Query 36796 GTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGC 36855
||||||| |||| ||| || | || |||||||| || ||||| ||||| || |
Sbjct 780196 GTGAATTGAATAGCGGCTGAGGCAGCTTGTGTTCTCAAGTAGTACATACCAGTCTTCAAA 780255
Query 36856 CCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCG-TATGTAGGATTATCTAT 36914
||| ||||| ||||| || ||||| || | || | || | || || ||
Sbjct 780256 CCCTTGCTCCAACCGTAGAAGTGCATGGAAGTTAACTTACCCATAGTTGGGGCCATG-AT 780314
Query 36915 ATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAA 36974
| || |||| || ||| |||||| || || || ||| || || ||||| || |
Sbjct 780315 GTGAATGTTCATGGAATGAGATTGATCAATGAAAGCTTGTCTATCAGCGGCCATATCAAT 780374
Query 36975 AATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAA 37034
||| ||||| |||| |||||||| |||||||| | | || || | | || |
Sbjct 780375 GATAGTCTTTTGTGATAATTCCCAAACAGTTTTATACAAATCCTTCATTTCTTGAGGAAT 780434
Query 37035 ATCT---AAATGTTGAATAGAACCATTATGTAACACAATTGTATT---CTTTATGTCATT 37088
| | || ||||| ||||||||||| | || || || |||| ||| ||| | |
Sbjct 780435 GTTTGGCAATTGTTGGATAGAACCATTGT-TAGCA--ATGATATTAGACTTCATGGCTTC 780491
Query 37089 ATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATC 37148
|| ||| ||| || | || || |||||| || ||| || |||| || | ||
Sbjct 780492 ATCCCAAATACCCATATCAACTAAATCCTTCAATAAGTATGGGTTGACAATTTGGTATTC 780551
Query 37149 TCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATT 37208
|||||||| |||||| | || || || ||| ||||||| | | ||||| |
Sbjct 780552 ACCAGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGGTTCGAAACATTCATTGTA 780611
Query 37209 ACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAA 37268
|| ||| ||||| || ||||| ||||| ||||| || || | | | | ||||| ||
Sbjct 780612 ACCTAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAA 780671
Query 37269 TCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTT--C 37326
|| || | ||| | || | |||| |||||||||||| ||||| |
Sbjct 780672 ACCGTGCTTGGCAATCTTAGCCTTCAATTCAGTCCAATCCCATARGGTAGTTGGAGCAAC 780731
Query 37327 TTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCA 37386
|| ||| | ||| ||||||| || ||||| | ||||||||| | | || | ||
Sbjct 780732 GTT--CCAGAAATCGTATTGTAAAACACCTTGAGAAGCTGGAGAACCTTCGTAAGAAGCA 780789
Query 37387 TAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTT 37446
|| | ||| | ||||| ||||| ||| || ||| | || || | ||| || |||
Sbjct 780790 TAGGTTCCTTCAATTTCAGCTAATTCAGTGGAAGCTTCCAAAGCAGCGTGATAAATGGTT 780849
Query 37447 TCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAAT 37506
||||||||||| || || ||| || |||| ||| |||||||| | | || |
Sbjct 780850 TCGAAAATTTGAATGTTCAATTCYTTGGCTTTTTCAGAATCGAATGGAACTCTTAACATC 780909
Query 37507 ATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGAT 37566
||||| |||||||||||| |||||||| | | || ||||| ||| || | ||||||
Sbjct 780910 ATAAAAGTATCAGCCAAACCTTGAACACCTACGGCAATAGGTCTGTGTCTCATGTTAGAT 780969
Query 37567 CT---AGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTA 37623
|| || | ||| | | || ||||| || | || || | |||| || |||
Sbjct 780970 CTTCTAGCAGTTTCAA---CAGGGTAATAGTTTCTGTCAATAACAGCGTTTAAGTTCTTA 781026
Query 37624 ACTAGTA--TT------TTCGT-AATTATTCTCAACTTGTCGAACATAAATACGTT--AT 37672
| | | || ||||| || | || | || | || || | | | || ||
Sbjct 781027 GCAATAACCTTACAAACTTCGTGAAGTTTTTTGAAGTCGT--AAGTTTGAGTCTTTTGAT 781084
Query 37673 TAT-TAACAAATTTACTCA--------ACGAAATAGATCCTAGATTACATACAGCAACTT 37723
| | | ||||| | | | || ||| ||| ||||| |||||| ||
Sbjct 781085 CTTCKGAGACCTTTACAAAGGCTGGTAAGGCAACAGARGCTAAGTTACAAACAGCAGTTT 781144
Query 37724 CATCTTCGTTACTAA--ATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCC 37781
| | || | || | ||| | ||| || ||| | ||| ||| ||||||| ||
Sbjct 781145 CCTTATCAT--CTGAGTATTCAACAATTTCACAACATAAGTTAGAAGATTTAATTGTACC 781202
Query 37782 CAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCC 37841
||| || ||||||| |||||||||||||||| ||| || || | || | || || ||
Sbjct 781203 CAAGTTCTTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAAGGAGTACC 781262
Query 37842 TTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTT 37901
||| |||| || || | || | | |||||| || || || | | || | |
Sbjct 781263 AGTTTCGGTTTGGGCTTCTAAGATGGCGTACCATAACTTTTGAGCCTTGATGGTCTTTCT 781322
Query 37902 AAtttttttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATA--CA 37959
| | | | | |||||||| ||| | || | ||| |||| | ||||| ||
Sbjct 781323 ACCTCTACCTTCTAGTTCGTATTGGTCATAWAGCTTTTCAAAGTCAT--CACCATAAGCA 781380
Query 37960 TCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACG 38019
|| | || || ||| ||| | ||| | | || || ||| || ||| | | ||
Sbjct 781381 TCRCTCAAACCAGGAGCTTCACTAGGAGAGAATAAAGTCCAATCACCATTTGCCTTGACT 781440
Query 38020 CGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCT 38079
| | ||| || || ||||| | |||||| || | ||||||||| | | ||| ||||
Sbjct 781441 CTCTTCATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCT 781500
Query 38080 TCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCT 38139
|| || || ||| ||||| | | | ||||| || ||||||| |||||||||||||
Sbjct 781501 TCCTTACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCCATGGTTCT 781560
Query 38140 ATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTG 38199
| || | | | || || |||||||| | ||| || |||| || |||||| | |||
Sbjct 781561 AGGTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACATATCTGGCAGTG 781620
Query 38200 TTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATA 38259
|| || | | ||| | |||||| | | |||||| || | || || |||| | ||
Sbjct 781621 TTGTTGAAAACTCTAACCATAGGAATCAAACCATTGGAAGTACCATTGGTACCAGCAATG 781680
Query 38260 TAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGAT 38319
|||| || | | || || || || || || || ||||| ||| || ||
Sbjct 781681 TAAGAGCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCKGCAGTCTTAGAA 781740
Query 38320 ATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGT 38379
||| ||| |||| || || |||||| | ||||| || ||| |||||||| || |
Sbjct 781741 ATTTGAGCACATTCCTTYAAGGTATCATAGATACCGTCAATAGAATCATCCTTCATAGAA 781800
Query 38380 AGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGAT 38439
| || |||||| |||||||||||| |||||| || || || |||| ||| |||||
Sbjct 781801 ATTAAGAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAA 781860
Query 38440 GCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCA 38499
||||| | || || ||| |||| | || || ||||| || || | || || |
Sbjct 781861 GCATGGGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTTCAATGTTT 781920
Query 38500 CCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTA 38559
| ||||| ||||| | || || ||||| | || ||||||||||||||| | || |||
Sbjct 781921 TCACCGTGGATACCAACAGCAACTCTCATRATCAAATGTTGTGGTCTTTCAACGATCTTA 781980
Query 38560 TTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATAACTATA--TG 38617
||| || | || || ||| |||| ||||| || | |||||||| | || ||
Sbjct 781981 CCATTGATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAGTTG 782040
Query 38618 AATAATCTCTATC 38630
| ||||||||||
Sbjct 782041 A--AATCTCTATC 782051
>seq1
Length=1289090
Score = 253 bits (280), Expect = 2e-62
Identities = 560/829 (68%), Gaps = 30/829 (4%)
Strand=Plus/Minus
Query 11338 CTTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATATATA 11397
||||||||| ||| ||||| ||| || ||||| |||||||| ||| ||||| |
Sbjct 688538 CTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTT 688479
Query 11398 CTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTGTTAA 11457
||||||||| || || || |||||||| | ||||| |||||| | |||
Sbjct 688478 TTCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTTACCTAAGGCAACTAA 688419
Query 11458 TAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAG 11517
||||||||| || || ||||| | ||| || ||||| | | ||||||||| | |
Sbjct 688418 TAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAA 688359
Query 11518 ATCCACCGGAATAGCAACTGTCAAAAACTC-CTTTTCTATATTAACCGCATCAATGATTA 11576
| || ||||| ||| | |||| || |||||| || | ||| || ||| || |
Sbjct 688358 TGCAACTGGAATGGCATCAA-CAAAGTATCTCTTTTCAATTTCAACAGCTTCAGCAATAA 688300
Query 11577 TCGACGTTATAACTTCCTTAGATGGTGGATGTAAT--AAATGTTTAAACATTAAACACGC 11634
| | || | || || ||| | ||| | || || |||| || ||| ||
Sbjct 688299 TT--CTTTCAATGATCTTTGGATCTGGCTTGTTCTTTAAGTGRGAGAACAATAGACAGGC 688242
Query 11635 AAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGG 11694
||| ||| |||||||||||| ||||||| || | ||| || || || || || || ||
Sbjct 688241 AAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAGG 688182
Query 11695 CATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCC 11754
|||||| || ||| || | ||| || |||||||||||||||||||| || || | ||
Sbjct 688181 CATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACACC 688122
Query 11755 CTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA------CCTTGTTGCTAGATAT 11808
|| ||||| ||||| || || | |||||| || | | |||| | || || ||
Sbjct 688121 TTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTAT--CTTGA-AT 688065
Query 11809 CCATTTTCTGGCCCAATCAGC--TTTCTTT--TTTACGCATTCCATTGTTTCTATAGCGT 11864
|||| | | ||||| ||||| |||| || ||| | | || |||||||||||||
Sbjct 688064 CCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGA----ATAGTTTCTATAGCGT 688009
Query 11865 TAAATA--AATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATA 11922
| |||| || || ||||| | ||| | | ||||| |||| ||||||| |||
Sbjct 688008 TTAATAAGAAATCA--TTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATA 687951
Query 11923 CATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGA 11982
|||| || ||||| |||||||| ||||| || || |||||||| || ||||
Sbjct 687950 AGTTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGG 687891
Query 11983 ACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGA 12042
| || || || || | || |||| | || || ||||| |||||||||||| ||
Sbjct 687890 AATTTGAACTTCAGCAGAGAARTTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGC 687831
Query 12043 TGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAAT---TTATC 12099
||||| || || | | | || || || |||| | || | | | | ||||
Sbjct 687830 AGCAAAGAAAGCCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATT 687771
Query 12100 CCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAA 12148
|||||| | |||||| || || ||||| | ||||||| ||||||| |||
Sbjct 687770 CCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAA 687722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468524694581920
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