Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq14 338 6e-88 seq1 253 2e-62 >seq14 Length=1507144 Score = 338 bits (374), Expect = 6e-88 Identities = 1208/1873 (64%), Gaps = 55/1873 (3%) Strand=Plus/Plus Query 36796 GTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGC 36855 ||||||| |||| ||| || | || |||||||| || ||||| ||||| || | Sbjct 780196 GTGAATTGAATAGCGGCTGAGGCAGCTTGTGTTCTCAAGTAGTACATACCAGTCTTCAAA 780255 Query 36856 CCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCG-TATGTAGGATTATCTAT 36914 ||| ||||| ||||| || ||||| || | || | || | || || || Sbjct 780256 CCCTTGCTCCAACCGTAGAAGTGCATGGAAGTTAACTTACCCATAGTTGGGGCCATG-AT 780314 Query 36915 ATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAA 36974 | || |||| || ||| |||||| || || || ||| || || ||||| || | Sbjct 780315 GTGAATGTTCATGGAATGAGATTGATCAATGAAAGCTTGTCTATCAGCGGCCATATCAAT 780374 Query 36975 AATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAA 37034 ||| ||||| |||| |||||||| |||||||| | | || || | | || | Sbjct 780375 GATAGTCTTTTGTGATAATTCCCAAACAGTTTTATACAAATCCTTCATTTCTTGAGGAAT 780434 Query 37035 ATCT---AAATGTTGAATAGAACCATTATGTAACACAATTGTATT---CTTTATGTCATT 37088 | | || ||||| ||||||||||| | || || || |||| ||| ||| | | Sbjct 780435 GTTTGGCAATTGTTGGATAGAACCATTGT-TAGCA--ATGATATTAGACTTCATGGCTTC 780491 Query 37089 ATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATC 37148 || ||| ||| || | || || |||||| || ||| || |||| || | || Sbjct 780492 ATCCCAAATACCCATATCAACTAAATCCTTCAATAAGTATGGGTTGACAATTTGGTATTC 780551 Query 37149 TCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATT 37208 |||||||| |||||| | || || || ||| ||||||| | | ||||| | Sbjct 780552 ACCAGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGGTTCGAAACATTCATTGTA 780611 Query 37209 ACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAA 37268 || ||| ||||| || ||||| ||||| ||||| || || | | | | ||||| || Sbjct 780612 ACCTAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAA 780671 Query 37269 TCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTT--C 37326 || || | ||| | || | |||| |||||||||||| ||||| | Sbjct 780672 ACCGTGCTTGGCAATCTTAGCCTTCAATTCAGTCCAATCCCATARGGTAGTTGGAGCAAC 780731 Query 37327 TTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCA 37386 || ||| | ||| ||||||| || ||||| | ||||||||| | | || | || Sbjct 780732 GTT--CCAGAAATCGTATTGTAAAACACCTTGAGAAGCTGGAGAACCTTCGTAAGAAGCA 780789 Query 37387 TAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTT 37446 || | ||| | ||||| ||||| ||| || ||| | || || | ||| || ||| Sbjct 780790 TAGGTTCCTTCAATTTCAGCTAATTCAGTGGAAGCTTCCAAAGCAGCGTGATAAATGGTT 780849 Query 37447 TCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAAT 37506 ||||||||||| || || ||| || |||| ||| |||||||| | | || | Sbjct 780850 TCGAAAATTTGAATGTTCAATTCYTTGGCTTTTTCAGAATCGAATGGAACTCTTAACATC 780909 Query 37507 ATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGAT 37566 ||||| |||||||||||| |||||||| | | || ||||| ||| || | |||||| Sbjct 780910 ATAAAAGTATCAGCCAAACCTTGAACACCTACGGCAATAGGTCTGTGTCTCATGTTAGAT 780969 Query 37567 CT---AGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTA 37623 || || | ||| | | || ||||| || | || || | |||| || ||| Sbjct 780970 CTTCTAGCAGTTTCAA---CAGGGTAATAGTTTCTGTCAATAACAGCGTTTAAGTTCTTA 781026 Query 37624 ACTAGTA--TT------TTCGT-AATTATTCTCAACTTGTCGAACATAAATACGTT--AT 37672 | | | || ||||| || | || | || | || || | | | || || Sbjct 781027 GCAATAACCTTACAAACTTCGTGAAGTTTTTTGAAGTCGT--AAGTTTGAGTCTTTTGAT 781084 Query 37673 TAT-TAACAAATTTACTCA--------ACGAAATAGATCCTAGATTACATACAGCAACTT 37723 | | | ||||| | | | || ||| ||| ||||| |||||| || Sbjct 781085 CTTCKGAGACCTTTACAAAGGCTGGTAAGGCAACAGARGCTAAGTTACAAACAGCAGTTT 781144 Query 37724 CATCTTCGTTACTAA--ATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCC 37781 | | || | || | ||| | ||| || ||| | ||| ||| ||||||| || Sbjct 781145 CCTTATCAT--CTGAGTATTCAACAATTTCACAACATAAGTTAGAAGATTTAATTGTACC 781202 Query 37782 CAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCC 37841 ||| || ||||||| |||||||||||||||| ||| || || | || | || || || Sbjct 781203 CAAGTTCTTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAAGGAGTACC 781262 Query 37842 TTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTT 37901 ||| |||| || || | || | | |||||| || || || | | || | | Sbjct 781263 AGTTTCGGTTTGGGCTTCTAAGATGGCGTACCATAACTTTTGAGCCTTGATGGTCTTTCT 781322 Query 37902 AAtttttttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATA--CA 37959 | | | | | |||||||| ||| | || | ||| |||| | ||||| || Sbjct 781323 ACCTCTACCTTCTAGTTCGTATTGGTCATAWAGCTTTTCAAAGTCAT--CACCATAAGCA 781380 Query 37960 TCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACG 38019 || | || || ||| ||| | ||| | | || || ||| || ||| | | || Sbjct 781381 TCRCTCAAACCAGGAGCTTCACTAGGAGAGAATAAAGTCCAATCACCATTTGCCTTGACT 781440 Query 38020 CGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCT 38079 | | ||| || || ||||| | |||||| || | ||||||||| | | ||| |||| Sbjct 781441 CTCTTCATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCT 781500 Query 38080 TCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCT 38139 || || || ||| ||||| | | | ||||| || ||||||| ||||||||||||| Sbjct 781501 TCCTTACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCCATGGTTCT 781560 Query 38140 ATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTG 38199 | || | | | || || |||||||| | ||| || |||| || |||||| | ||| Sbjct 781561 AGGTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACATATCTGGCAGTG 781620 Query 38200 TTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATA 38259 || || | | ||| | |||||| | | |||||| || | || || |||| | || Sbjct 781621 TTGTTGAAAACTCTAACCATAGGAATCAAACCATTGGAAGTACCATTGGTACCAGCAATG 781680 Query 38260 TAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGAT 38319 |||| || | | || || || || || || || ||||| ||| || || Sbjct 781681 TAAGAGCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCKGCAGTCTTAGAA 781740 Query 38320 ATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGT 38379 ||| ||| |||| || || |||||| | ||||| || ||| |||||||| || | Sbjct 781741 ATTTGAGCACATTCCTTYAAGGTATCATAGATACCGTCAATAGAATCATCCTTCATAGAA 781800 Query 38380 AGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGAT 38439 | || |||||| |||||||||||| |||||| || || || |||| ||| ||||| Sbjct 781801 ATTAAGAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAA 781860 Query 38440 GCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCA 38499 ||||| | || || ||| |||| | || || ||||| || || | || || | Sbjct 781861 GCATGGGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTTCAATGTTT 781920 Query 38500 CCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTA 38559 | ||||| ||||| | || || ||||| | || ||||||||||||||| | || ||| Sbjct 781921 TCACCGTGGATACCAACAGCAACTCTCATRATCAAATGTTGTGGTCTTTCAACGATCTTA 781980 Query 38560 TTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATAACTATA--TG 38617 ||| || | || || ||| |||| ||||| || | |||||||| | || || Sbjct 781981 CCATTGATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAGTTG 782040 Query 38618 AATAATCTCTATC 38630 | |||||||||| Sbjct 782041 A--AATCTCTATC 782051 >seq1 Length=1289090 Score = 253 bits (280), Expect = 2e-62 Identities = 560/829 (68%), Gaps = 30/829 (4%) Strand=Plus/Minus Query 11338 CTTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATATATA 11397 ||||||||| ||| ||||| ||| || ||||| |||||||| ||| ||||| | Sbjct 688538 CTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTT 688479 Query 11398 CTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTGTTAA 11457 ||||||||| || || || |||||||| | ||||| |||||| | ||| Sbjct 688478 TTCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTTACCTAAGGCAACTAA 688419 Query 11458 TAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAG 11517 ||||||||| || || ||||| | ||| || ||||| | | ||||||||| | | Sbjct 688418 TAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAA 688359 Query 11518 ATCCACCGGAATAGCAACTGTCAAAAACTC-CTTTTCTATATTAACCGCATCAATGATTA 11576 | || ||||| ||| | |||| || |||||| || | ||| || ||| || | Sbjct 688358 TGCAACTGGAATGGCATCAA-CAAAGTATCTCTTTTCAATTTCAACAGCTTCAGCAATAA 688300 Query 11577 TCGACGTTATAACTTCCTTAGATGGTGGATGTAAT--AAATGTTTAAACATTAAACACGC 11634 | | || | || || ||| | ||| | || || |||| || ||| || Sbjct 688299 TT--CTTTCAATGATCTTTGGATCTGGCTTGTTCTTTAAGTGRGAGAACAATAGACAGGC 688242 Query 11635 AAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGG 11694 ||| ||| |||||||||||| ||||||| || | ||| || || || || || || || Sbjct 688241 AAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAGG 688182 Query 11695 CATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCC 11754 |||||| || ||| || | ||| || |||||||||||||||||||| || || | || Sbjct 688181 CATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACACC 688122 Query 11755 CTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA------CCTTGTTGCTAGATAT 11808 || ||||| ||||| || || | |||||| || | | |||| | || || || Sbjct 688121 TTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTAT--CTTGA-AT 688065 Query 11809 CCATTTTCTGGCCCAATCAGC--TTTCTTT--TTTACGCATTCCATTGTTTCTATAGCGT 11864 |||| | | ||||| ||||| |||| || ||| | | || ||||||||||||| Sbjct 688064 CCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGA----ATAGTTTCTATAGCGT 688009 Query 11865 TAAATA--AATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATA 11922 | |||| || || ||||| | ||| | | ||||| |||| ||||||| ||| Sbjct 688008 TTAATAAGAAATCA--TTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATA 687951 Query 11923 CATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGA 11982 |||| || ||||| |||||||| ||||| || || |||||||| || |||| Sbjct 687950 AGTTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGG 687891 Query 11983 ACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGA 12042 | || || || || | || |||| | || || ||||| |||||||||||| || Sbjct 687890 AATTTGAACTTCAGCAGAGAARTTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGC 687831 Query 12043 TGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAAT---TTATC 12099 ||||| || || | | | || || || |||| | || | | | | |||| Sbjct 687830 AGCAAAGAAAGCCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATT 687771 Query 12100 CCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAA 12148 |||||| | |||||| || || ||||| | ||||||| ||||||| ||| Sbjct 687770 CCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAA 687722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524694581920