Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq14 434 1e-116 seq1 206 4e-48 >seq14 Length=1507144 Score = 434 bits (480), Expect = 1e-116 Identities = 1489/2298 (65%), Gaps = 75/2298 (3%) Strand=Plus/Plus Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898 ||||||||||| | || || || | || || | | |||||||| || || || | | Sbjct 780196 GTGAATTGAATAGCGGCTGAGGCAGCTTGTGTTCTCAAGTAGTACATACCAGTCTTCAAA 780255 Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATC-TGCTA 64956 || ||||| ||||| || ||||| |||| || ||| | || | || | Sbjct 780256 CCCTTGCTCCAACCGTAGAAGTGCATGGAAGTTAACTTACCCATAGTTGGGGCCATG--A 780313 Query 64957 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 65016 | || || ||||| || ||| |||||| ||||| ||| || || || ||||| | | Sbjct 780314 TGTGAATGTTCATGGAATGAGATTGATCAATGAAAGCTTGTCTATCAGCGGCCATATCAA 780373 Query 65017 TGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 65075 |||| |||||||||| | |||||||| ||||||||| || || ||| || |||| ||| Sbjct 780374 TGATAGTCTTTTGTGATAATTCCCAAACAGTTTTATACAAATC-CTTCATTTCTTGAGGA 780432 Query 65076 AGGTTTGT--ATTCT-GAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCA 65132 | ||||| ||| | | || || ||| | || || || || ||| || | ||| Sbjct 780433 ATGTTTGGCAATTGTTGGATAGAACCATTGTTAGCAATGATATTAGACTTCATGGCTTCA 780492 Query 65133 TTCCATAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTC 65191 | ||| ||| | | || |||| | | | | | || || || | ||| |||| Sbjct 780493 TCCCA-AATACCCATATCAACTAAATCCTTCAATAAGTATGGGTTGACAATTTGGTATTC 780551 Query 65192 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATT 65251 ||||| || ||| | || ||| || ||| || | ||||| | | | ||||| | Sbjct 780552 ACCAGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGGTTCGAAACATTCATTGTA 780611 Query 65252 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAG 65311 || |||||||| | ||| || ||||| |||||||| || |||||||| ||||| | Sbjct 780612 ACCTAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAA 780671 Query 65312 ACCGTATGTTCTGATTTTATCTTTTAGAGGTTC---CCAATTCCAAAGATCCGACGGTAC 65368 ||||| | || ||| | || | ||| ||||| ||| | | || | Sbjct 780672 ACCGTGCTTGGCAATCTTAGCCTTCAA---TTCAGTCCAATCCCATARGGTAGTTGGAGC 780728 Query 65369 AACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATC 65428 ||| ||||| || ||| | | || || ||| | || | | | Sbjct 780729 AACGTTCCAGAAATCGTATTGTAAAACACCTTGAGAAGCTGGAGAACCTTCGTAAGAAGC 780788 Query 65429 GTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGT 65488 || | |||||| | ||||||| |||| || || || ||| ||| ||||||||| Sbjct 780789 ATAGGTTCCTTCAATTTCAGCTAATTCAGTGGAAGCTTCCAAAGCAGCGTGATAAATGGT 780848 Query 65489 TTCGAAGATCTTCTTATTTAGATCTTGTGCTTC--CAGGCTATCAAATGGATAATTTAAG 65546 |||||| || | | || | || | |||| ||| ||| |||||| |||| Sbjct 780849 TTCGAAAATTTGAATGTTCAATTCYTTGGCTTTTTCAGA--ATCGAATGGAACTCTTAAC 780906 Query 65547 AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 65606 | ||||| | || || || ||||||||||| | | |||||||| |||||| | ||| Sbjct 780907 ATCATAAAAGTATCAGCCAAACCTTGAACACCTACGGCAATAGGTCTGTGTCTCATGTTA 780966 Query 65607 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 65666 || || ||| | || ||| ||||| || | || |||| || | | |||| Sbjct 780967 GATCTTCTAGCAGTTTCAACAGGGTAATAGTTTCTGTCAATAACAGCGTTTA-AGTTCTT 781025 Query 65667 A-CAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA------------TCGCTC 65713 | |||| || || || || | ||||| || || | | | || Sbjct 781026 AGCAATAACCTTACAAACTTCGTGAAGTTTTTTGAAGTCGTAAGTTTGAGTCTTTTGATC 781085 Query 65714 ATCTA------TTACAAACA-TGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCT 65766 || ||||||| || | || |||||||| || | |||||||| || | Sbjct 781086 TTCKGAGACCTTTACAAAGGCTGGT-AAGGCAACAGARGCTAAGTTACAAACAGCAGTTT 781144 Query 65767 CATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 65826 | ||| |||| | |||| | || ||| || | ||| | | || || || || | Sbjct 781145 CCTTATCATCTGAGTATTCAACAATTTCACAACATAAGTTAGAAGATTTAATTGTACCCA 781204 Query 65827 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAG 65886 | || | ||||||| ||||| ||||| |||||||| |||| |||||| |||||||||| Sbjct 781205 AGTTCTTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAAGGAGTACCAG 781264 Query 65887 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGT 65946 |||| | || | ||||| || || | ||| | | ||||||| || | ||| | Sbjct 781265 TTTCGGTTTGGGCTTCTAAGATGGCGTACCATAACTTTTGAGCCTTGATGGTC--TTTCT 781322 Query 65947 ATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATT 66004 | |||| |||| ||||||| | ||| | ||| || || || || || ||| Sbjct 781323 ACCTCTACCTTCTAGTTCGTATTGGTCATAWAGCTTTTCAAAGTCATCACCATAAGCATC 781382 Query 66005 GTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 66064 ||| |||||| |||| ||| | | || | ||| || || | |||| |||| Sbjct 781383 RCTCAAACCAGGAGCTTCACTAGGAGAGAATAAAGTCCAATCACCATTTGCCTTGACTCT 781442 Query 66065 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTC 66124 ||||| || | ||||||||||| | |||| ||||||||||| | ||| ||| || Sbjct 781443 CTTCATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCTTC 781502 Query 66125 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAA 66184 || || ||| ||| | | |||| ||| | | |||||| | ||||| ||||| | Sbjct 781503 CTTACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCCATGGTTCTAG 781562 Query 66185 GTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 66244 ||| | || | | ||||| | |||||| || || ||||| | ||||| || ||||| Sbjct 781563 GTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACATATCTGGCAGTGTT 781622 Query 66245 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATA 66304 || ||||||| | ||| ||||| | ||||||||| ||||||||||| || | || || Sbjct 781623 GTTGAAAACTCTAACCATAGGAATCAAACCATTGGAAGTACCATTGGTACCAGCAATGTA 781682 Query 66305 GCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 66364 ||| | | | || || ||| || ||| || || || || | ||||| || Sbjct 781683 AGAGCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCKGCAGTCTTAGAAAT 781742 Query 66365 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 66424 | || ||| || || ||||||||||| || || ||| ||||||| |||| || Sbjct 781743 TTGAGCACATTCCTTYAAGGTATCATAGATACCGTCAATAGAATCATCCTTCATAGAAAT 781802 Query 66425 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 66484 || ||||| ||||||||| | | ||| || ||||| |||| || |||||||| Sbjct 781803 TAAGAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAAGC 781862 Query 66485 GTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT-ATCCC 66543 || ||||| || ||| ||| | | ||||| || || || || || || | | Sbjct 781863 ATGGGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTTCAATGTTTTC 781922 Query 66544 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 66603 | | || || || || || || | ||| | || || || ||||||||||||||||| Sbjct 781923 ACCG-TGGATACCAACAGCAACTCTCATRATCAAATGTTGTGGTCTTTCAACGATCTTAC 781981 Query 66604 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGA 66661 || || ||||| ||||| ||| ||||||| || || ||||||||||||||||| ||| Sbjct 781982 CATTGATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAGTTGA 782041 Query 66662 AAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAAC-----T 66716 || |||| || | |||||| | | | |||| || | ||| |||| | Sbjct 782042 AA--TCTCTATCRAAGATAATAGTAGCATCTAAGGTATCTTTGTGTTTCATAACGGTTTT 782099 Query 66717 ACATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAG 66776 | | ||| | | ||||| || ||||| |||||| | || || ||| Sbjct 782100 ATAAACATCATCA-----GAAATCATTGGAGACAAAACACCATTTCTTTCGTTAACGTAG 782154 Query 66777 TTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATT--TG 66834 ||| |||| || || || |||| | ||||| |||||| |||| ||||||| || || Sbjct 782155 TTGTATAAGTCTTCGATAACTTGAGAAAATAATTTTTTGGTTTGCTTGTGTAAGTTACTG 782214 Query 66835 ATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCT 66893 || ||| ||||| ||||| | || |||||||| ||||| || || || || ||| Sbjct 782215 AT--GGCAATTCTGGCGGCAAGAACAGCATAATCAGGATGAACAGTGGT-CATGTAGGCA 782271 Query 66894 GCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGG 66953 |||| || || | | || ||||| | || || || || | || | || | Sbjct 782272 CAAGTTTCAGCGGCTAAGTTATCTAATTCGATGGTAGTAACACCTTCGTAGACACCGGAG 782331 Query 66954 ATAACCTTCAT--AGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATA 67011 |||| ||| | | ||||| | |||||| ||||| | || | ||| ||||| |||| Sbjct 782332 ATAA--TTCTTTGGGTGATTTTGACAGGATCGATATGTTTAGCATCTAATCCATAGCATA 782389 Query 67012 ATTTTCTAATACGAGATGTGATTTTATCAAACATGACATTTTCCTTGT-ATCCATTTCGT 67070 || | ||| | ||||| ||||||||||| ||| | ||| | ||| | || | Sbjct 782390 ATCTAGCAATTCTGGATGTAATTTTATCAAA-TTGAACTGGAACTTTTCTTCCGTCTCTT 782448 Query 67071 TTAATGACAAACATTTTT 67088 |||| |||||||| ||| Sbjct 782449 TTAACAACAAACATGTTT 782466 >seq1 Length=1289090 Score = 206 bits (228), Expect = 4e-48 Identities = 590/896 (66%), Gaps = 15/896 (2%) Strand=Plus/Minus Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926 ||||| || ||| || | ||||| || ||||| || ||||| |||| ||||| ||| Sbjct 688537 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 688478 Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATC 35986 ||||| || |||||||| ||| | ||||| | | |||| || || || | Sbjct 688477 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTTACCTAAGGCAACTAAT 688418 Query 35987 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 36046 |||||||| || |||||||| | |||| ||||| | ||| |||||| || | | | Sbjct 688417 AATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAAT 688358 Query 36047 TTAACTGGAAGAGCCACAGTAAGAAAT-TCTTGTTCAATAGAGACCGCGTCTGTTATAAT 36105 |||||||| || || || || |||| |||||| || || || | ||||| Sbjct 688357 GCAACTGGAATGGCATCAACAAAGTATCTCTT-TTCAATTTCAACAGCTTCAGCAATAAT 688299 Query 36106 AGATATTACTGTTTCTTCACTC-GGTGGATACAATAAATGTTTAAACATCAAACATGCGA 36164 | | | || | || || || | | ||| || |||| | ||| || | Sbjct 688298 TCTT-TCAATGATCTTTGGATCTGGCTTGTTCTTTAAGTGRGAGAACAATAGACAGGCAA 688240 Query 36165 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 36224 | || |||| ||| || ||||||| || ||||||||||| || || | || |||| Sbjct 688239 AGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAGGCA 688180 Query 36225 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 36284 | | || || || | ||| || || | |||||||| ||||| || || | |||| Sbjct 688179 TCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACACCTT 688120 Query 36285 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACT 36341 | || || ||||| |||| ||||| || || | | || | | || || ||||| Sbjct 688119 CAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATCCATC 688060 Query 36342 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGAT 36401 | |||||| || ||||| | || | ||| || || |||||||| || || | Sbjct 688059 TAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTTAATAAGA 688000 Query 36402 AGtttttttCATTACTATCTTTAACATATGTATC-AATCA-AAAGACTATACATTTCCGA 36459 | | ||||| || ||| || | ||||| || ||| | ||||| ||| |||| || Sbjct 687999 AATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGA--ATAAGTTTCAGA 687942 Query 36460 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 36519 ||||||||||| || ||||| || ||||||||||| |||| || | ||| || || Sbjct 687941 GTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTGAAC 687882 Query 36520 TTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 36579 ||| | | | || ||| | || |||||||| || || || ||| || ||||| || Sbjct 687881 TTCAGCAGAGAARTTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAAGAA 687822 Query 36580 CGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGT---TTATTCCAATCATT 36636 ||||| || | || ||| || |||| ||| | | | ||||||||||| | Sbjct 687821 AGCCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATCGTG 687762 Query 36637 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 36696 | ||| ||||| | ||| | |||||| | ||||| || || || || || | ||||| Sbjct 687761 TAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCTTATA 687702 Query 36697 CATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATC-TATTTTGATTT 36751 | ||| || || | ||| ||||| || | ||| |||| | ||||| ||| Sbjct 687701 GGCTTCCCAAATTTCTGGGAATTTGATTGGGAATAAAACGAATCTTCTTTTGTTTT 687646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172651911120