Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq1 320 2e-82 >seq1 Length=1289090 Score = 320 bits (354), Expect = 2e-82 Identities = 604/873 (69%), Gaps = 19/873 (2%) Strand=Plus/Minus Query 13568 AATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTC 13627 |||||| || |||||||| ||| |||||| ||||||||||| || || ||||| | Sbjct 688550 AATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGC 688491 Query 13628 CAGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATA-AACACTTTATCACAAC 13686 | ||||| ||||||||||| || ||||| || | ||||| |||| || || || Sbjct 688490 TAAGGATATGTTTTCCATAAAGTCGAATGGGTTGGT-GACATTGAACAGCTTTTCGTTAC 688432 Query 13687 CTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAAT 13746 ||| | | || |||||||||||||| ||| |||| |||||| ||||| |||| || Sbjct 688431 CTAAGGCAACTAATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCAT 688372 Query 13747 TCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAG 13806 ||||||| | || | || ||||| || || || ||||| || |||| Sbjct 688371 TCATACCAAGTAATGCAACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAG 688312 Query 13807 CCTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATT--TTAGATGTTTAAA 13864 | || ||||| || ||| |||| || || | | || ||| || || Sbjct 688311 CTTCAGCAATAATTCTTTCAATGATCT--TTGGATCTGGCTTGTTCTTTAAGTGRGAGAA 688254 Query 13865 AATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAA 13924 | || ||| ||||| ||| ||| | || |||||||||| || | |||||| || || Sbjct 688253 CAATAGACAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAA 688194 Query 13925 TGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGA 13984 || || || |||||||| || ||| || ||||| || || ||||||||||| || || Sbjct 688193 AGTCAAACCAGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGA 688134 Query 13985 AAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTT 14044 || || | || ||||| |||||||| || | | || ||| ||||| | || | || Sbjct 688133 GAAAAAGACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTT 688074 Query 14045 GT-TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAA 14103 | | || |||||| | |||||||||||| |||| ||||| | || ||||| | Sbjct 688073 ATCTTGA-ATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTA 688015 Query 14104 TAGCATTAAATAAATATTCCTTCTCTTTAGTA--CTTGAAATGTATGTATC-AATAAGTA 14160 |||| || ||||| | || || || || | | ||||| ||||||| || ||||| | Sbjct 688014 TAGCGTTTAATAAGAAATCATTTTCCTTTGGATCCTTGA--TGTATGTGTCTAATAATAA 687957 Query 14161 AGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAG 14220 || ||| |||||||||| ||||||||||| || || ||||| || || || ||| Sbjct 687956 AGA-ATAAGTTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAG 687898 Query 14221 CTTCCGACCATTGTACTTCCG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCA 14279 |||| | ||| ||||| | || || | |||| |||| |||||||| || |||||| Sbjct 687897 CTTCTGGAATTTGAACTTCAGCAGAGAART-TTTCAACCAAGTTTTCATTGACAATACCA 687839 Query 14280 TCACTAGCTGCAAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGTTG 14336 ||| ||| ||||| || ||||| | || ||| ||| | || | | |||||| | Sbjct 687838 TCAGAAGCAGCAAAGAAAGCCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATT 687779 Query 14337 AGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTA 14396 || ||||||||| |||||||||||| | ||| | ||| ||| | ||||| ||| | Sbjct 687778 CTGTTATTCCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAA 687719 Query 14397 GCGACAGCTTTTTTATACATTACCCATATTTCT 14429 || | ||| | ||||| | |||| |||||| Sbjct 687718 GCTTCGGCTCTCTTATAGGCTTCCCAAATTTCT 687686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727892061200