Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq1 320 2e-82
>seq1
Length=1289090
Score = 320 bits (354), Expect = 2e-82
Identities = 604/873 (69%), Gaps = 19/873 (2%)
Strand=Plus/Minus
Query 13568 AATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTC 13627
|||||| || |||||||| ||| |||||| ||||||||||| || || ||||| |
Sbjct 688550 AATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGC 688491
Query 13628 CAGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATA-AACACTTTATCACAAC 13686
| ||||| ||||||||||| || ||||| || | ||||| |||| || || ||
Sbjct 688490 TAAGGATATGTTTTCCATAAAGTCGAATGGGTTGGT-GACATTGAACAGCTTTTCGTTAC 688432
Query 13687 CTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAAT 13746
||| | | || |||||||||||||| ||| |||| |||||| ||||| |||| ||
Sbjct 688431 CTAAGGCAACTAATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCAT 688372
Query 13747 TCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAG 13806
||||||| | || | || ||||| || || || ||||| || ||||
Sbjct 688371 TCATACCAAGTAATGCAACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAG 688312
Query 13807 CCTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATT--TTAGATGTTTAAA 13864
| || ||||| || ||| |||| || || | | || ||| || ||
Sbjct 688311 CTTCAGCAATAATTCTTTCAATGATCT--TTGGATCTGGCTTGTTCTTTAAGTGRGAGAA 688254
Query 13865 AATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAA 13924
| || ||| ||||| ||| ||| | || |||||||||| || | |||||| || ||
Sbjct 688253 CAATAGACAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAA 688194
Query 13925 TGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGA 13984
|| || || |||||||| || ||| || ||||| || || ||||||||||| || ||
Sbjct 688193 AGTCAAACCAGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGA 688134
Query 13985 AAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTT 14044
|| || | || ||||| |||||||| || | | || ||| ||||| | || | ||
Sbjct 688133 GAAAAAGACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTT 688074
Query 14045 GT-TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAA 14103
| | || |||||| | |||||||||||| |||| ||||| | || ||||| |
Sbjct 688073 ATCTTGA-ATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTA 688015
Query 14104 TAGCATTAAATAAATATTCCTTCTCTTTAGTA--CTTGAAATGTATGTATC-AATAAGTA 14160
|||| || ||||| | || || || || | | ||||| ||||||| || ||||| |
Sbjct 688014 TAGCGTTTAATAAGAAATCATTTTCCTTTGGATCCTTGA--TGTATGTGTCTAATAATAA 687957
Query 14161 AGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAG 14220
|| ||| |||||||||| ||||||||||| || || ||||| || || || |||
Sbjct 687956 AGA-ATAAGTTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAG 687898
Query 14221 CTTCCGACCATTGTACTTCCG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCA 14279
|||| | ||| ||||| | || || | |||| |||| |||||||| || ||||||
Sbjct 687897 CTTCTGGAATTTGAACTTCAGCAGAGAART-TTTCAACCAAGTTTTCATTGACAATACCA 687839
Query 14280 TCACTAGCTGCAAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGTTG 14336
||| ||| ||||| || ||||| | || ||| ||| | || | | |||||| |
Sbjct 687838 TCAGAAGCAGCAAAGAAAGCCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATT 687779
Query 14337 AGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTA 14396
|| ||||||||| |||||||||||| | ||| | ||| ||| | ||||| ||| |
Sbjct 687778 CTGTTATTCCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAA 687719
Query 14397 GCGACAGCTTTTTTATACATTACCCATATTTCT 14429
|| | ||| | ||||| | |||| ||||||
Sbjct 687718 GCTTCGGCTCTCTTATAGGCTTCCCAAATTTCT 687686
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479727892061200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |