Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq1 333 3e-86 >seq1 Length=1289090 Score = 333 bits (368), Expect = 3e-86 Identities = 607/873 (70%), Gaps = 19/873 (2%) Strand=Plus/Minus Query 13356 AATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTC 13415 |||||| || |||||||| ||| |||||| |||||||| || || || ||||| | Sbjct 688550 AATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGC 688491 Query 13416 CAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATA-AACACTTTATCACAAC 13474 | ||||| ||||||||||| |||||||| || || ||||| |||| || || || Sbjct 688490 TAAGGATATGTTTTCCATAAAGTCGAATGGGTTGGT-GACATTGAACAGCTTTTCGTTAC 688432 Query 13475 CTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAAT 13534 ||| | | ||||||||||||||||| ||| |||| |||||| ||||| |||| || Sbjct 688431 CTAAGGCAACTAATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCAT 688372 Query 13535 TCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAG 13594 ||||||| | || | || ||||| || | || || ||||| || |||| Sbjct 688371 TCATACCAAGTAATGCAACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAG 688312 Query 13595 CCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATT--TTAGATGTTTAAA 13652 | || ||||| | | ||| || | || || | | || ||| || || Sbjct 688311 CTTCAGCAATAATTCTTTCAATGATCT--TTGGATCTGGCTTGTTCTTTAAGTGRGAGAA 688254 Query 13653 AATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAA 13712 | || ||| ||||| ||| ||| | || |||||||||| || | |||||| || || Sbjct 688253 CAATAGACAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAA 688194 Query 13713 TGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGA 13772 || || || |||||||| || ||| || ||||| || || ||||| ||||| || || Sbjct 688193 AGTCAAACCAGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGA 688134 Query 13773 AAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTT 13832 || || | || ||||| |||||||| || | |||| ||| ||||| | || | || Sbjct 688133 GAAAAAGACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTT 688074 Query 13833 GT-TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGA 13891 | |||| |||||| | |||||||||||| |||| ||||| | || ||||| | Sbjct 688073 ATCTTGA-ATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTA 688015 Query 13892 TTGCATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATC-AATAAGTA 13948 | || || ||||| || || || || | | |||| |||||||| || ||||| || Sbjct 688014 TAGCGTTTAATAAGAAATCATTTTCCTTTGGATCCTTG--ATGTATGTGTCTAATAA-TA 687958 Query 13949 AGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAG 14008 | ||| |||||||||| |||||||| || || || ||||| || ||||| ||| Sbjct 687957 AAGAATAAGTTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAG 687898 Query 14009 CTTCTGACCATTGTACCTCCG-AGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCA 14067 |||||| ||| || || | || || | |||| ||||||||||||| ||||||||| Sbjct 687897 CTTCTGGAATTTGAACTTCAGCAGAGAART-TTTCAACCAAGTTTTCATTGACAATACCA 687839 Query 14068 TCACTAGCTGCAAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGTTG 14124 ||| ||| ||||| || ||||| | || ||| ||| | || | | |||||| | Sbjct 687838 TCAGAAGCAGCAAAGAAAGCCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATT 687779 Query 14125 AGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTA 14184 || ||||||||| |||||||||||| | ||| | ||| ||| | ||||| ||| | Sbjct 687778 CTGTTATTCCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAA 687719 Query 14185 GCGACAGCTTTTTTATACATTACCCATATTTCT 14217 || | ||| | ||||| | |||| |||||| Sbjct 687718 GCTTCGGCTCTCTTATAGGCTTCCCAAATTTCT 687686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588692317520