Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq1 333 3e-86
>seq1
Length=1289090
Score = 333 bits (368), Expect = 3e-86
Identities = 607/873 (70%), Gaps = 19/873 (2%)
Strand=Plus/Minus
Query 13356 AATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTC 13415
|||||| || |||||||| ||| |||||| |||||||| || || || ||||| |
Sbjct 688550 AATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGC 688491
Query 13416 CAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATA-AACACTTTATCACAAC 13474
| ||||| ||||||||||| |||||||| || || ||||| |||| || || ||
Sbjct 688490 TAAGGATATGTTTTCCATAAAGTCGAATGGGTTGGT-GACATTGAACAGCTTTTCGTTAC 688432
Query 13475 CTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAAT 13534
||| | | ||||||||||||||||| ||| |||| |||||| ||||| |||| ||
Sbjct 688431 CTAAGGCAACTAATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCAT 688372
Query 13535 TCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAG 13594
||||||| | || | || ||||| || | || || ||||| || ||||
Sbjct 688371 TCATACCAAGTAATGCAACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAG 688312
Query 13595 CCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATT--TTAGATGTTTAAA 13652
| || ||||| | | ||| || | || || | | || ||| || ||
Sbjct 688311 CTTCAGCAATAATTCTTTCAATGATCT--TTGGATCTGGCTTGTTCTTTAAGTGRGAGAA 688254
Query 13653 AATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAA 13712
| || ||| ||||| ||| ||| | || |||||||||| || | |||||| || ||
Sbjct 688253 CAATAGACAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAA 688194
Query 13713 TGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGA 13772
|| || || |||||||| || ||| || ||||| || || ||||| ||||| || ||
Sbjct 688193 AGTCAAACCAGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGA 688134
Query 13773 AAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTT 13832
|| || | || ||||| |||||||| || | |||| ||| ||||| | || | ||
Sbjct 688133 GAAAAAGACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTT 688074
Query 13833 GT-TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGA 13891
| |||| |||||| | |||||||||||| |||| ||||| | || ||||| |
Sbjct 688073 ATCTTGA-ATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTA 688015
Query 13892 TTGCATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATC-AATAAGTA 13948
| || || ||||| || || || || | | |||| |||||||| || ||||| ||
Sbjct 688014 TAGCGTTTAATAAGAAATCATTTTCCTTTGGATCCTTG--ATGTATGTGTCTAATAA-TA 687958
Query 13949 AGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAG 14008
| ||| |||||||||| |||||||| || || || ||||| || ||||| |||
Sbjct 687957 AAGAATAAGTTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAG 687898
Query 14009 CTTCTGACCATTGTACCTCCG-AGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCA 14067
|||||| ||| || || | || || | |||| ||||||||||||| |||||||||
Sbjct 687897 CTTCTGGAATTTGAACTTCAGCAGAGAART-TTTCAACCAAGTTTTCATTGACAATACCA 687839
Query 14068 TCACTAGCTGCAAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGTTG 14124
||| ||| ||||| || ||||| | || ||| ||| | || | | |||||| |
Sbjct 687838 TCAGAAGCAGCAAAGAAAGCCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATT 687779
Query 14125 AGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTA 14184
|| ||||||||| |||||||||||| | ||| | ||| ||| | ||||| ||| |
Sbjct 687778 CTGTTATTCCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAA 687719
Query 14185 GCGACAGCTTTTTTATACATTACCCATATTTCT 14217
|| | ||| | ||||| | |||| ||||||
Sbjct 687718 GCTTCGGCTCTCTTATAGGCTTCCCAAATTTCT 687686
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478588692317520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |