Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq14 471 6e-128 seq1 181 1e-40 >seq14 Length=1507144 Score = 471 bits (522), Expect = 6e-128 Identities = 1423/2182 (65%), Gaps = 77/2182 (4%) Strand=Plus/Plus Query 70918 ATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTT 70977 |||||||| ||||| || ||| |||||| ||||| ||| || || || ||||| | Sbjct 780313 ATGTGAATGTTCATGGAATGAGATTGATCAATGAAAGCTTGTCTATCAGCGGCCATATCA 780372 Query 70978 ATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGG 71036 ||||| |||||||||| | |||||||| ||||||||| || || ||| || |||| || Sbjct 780373 ATGATAGTCTTTTGTGATAATTCCCAAACAGTTTTATACAAATC-CTTCATTTCTTGAGG 780431 Query 71037 AAGGTTTGT--ATTCT-GAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTC 71093 || ||||| ||| | | || || ||| | ||||| || || || || |||| Sbjct 780432 AATGTTTGGCAATTGTTGGATAGAACCATTGTTAGCAATGATATTAGACTTCATGGCTTC 780491 Query 71094 ATTCCATAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATT 71152 || ||| ||| | | || |||| | | | | | || || || | ||| ||| Sbjct 780492 ATCCCA-AATACCCATATCAACTAAATCCTTCAATAAGTATGGGTTGACAATTTGGTATT 780550 Query 71153 CTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTAT 71212 | ||||| || ||| | || ||| || ||| || | ||||| | | ||||| | Sbjct 780551 CACCAGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGGTTCGAAACATTCATTGT 780610 Query 71213 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAA 71272 || |||||||| | ||| || ||||| |||||||| || ||||||| ||||| | Sbjct 780611 AACCTAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTA 780670 Query 71273 GACCATGTGATCGG--ATTTTATCTTTTAGAGATTC---CCAATTCCAAAGATCCGATGG 71327 ||| ||| | || || ||| | || | |||| ||||| ||| | | ||| Sbjct 780671 AACC--GTGCTTGGCAATCTTAGCCTTCA---ATTCAGTCCAATCCCATARGGTAGTTGG 780725 Query 71328 TACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATATGT 71387 |||| | || | | ||| || ||| | || | Sbjct 780726 AGCAACGTTCCAGAAATCGTATTGTAAAACACCTTGAGAAGCTGGAGAACCTTCGTAAGA 780785 Query 71388 ATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAAT 71447 | | || | |||||| |||| |||| |||| || || || || | | |||||| Sbjct 780786 AGCATAGGTTCCTTCAATTTCAGCTAATTCAGTGGAAGCTTCCAAAGCAGCGTGATAAAT 780845 Query 71448 GGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAA 71507 |||||||||||| | | || | || | |||| ||| |||||| |||| Sbjct 780846 GGTTTCGAAAATTTGAATGTTCAATTCYTTGGCTTTTTCAGAATCGAATGGAACTCTTAA 780905 Query 71508 GAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATT 71567 | ||||| | || || || |||||||| || | | ||||||||||||||| | || Sbjct 780906 CATCATAAAAGTATCAGCCAAACCTTGAACACCTACGGCAATAGGTCTGTGTCTCATGTT 780965 Query 71568 AGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCT 71627 ||| || ||| | || ||| ||||| || | || |||| || | | |||| Sbjct 780966 AGATCTTCTAGCAGTTTCAACAGGGTAATAGTTTCTGTCAATAACAGCGTTTA-AGTTCT 781024 Query 71628 GA-CTATTACTTTGACCACATCCTTTAGTTTGAGAAAATC--AA--------------AT 71670 | | || || || || || | ||||| || || || || Sbjct 781025 TAGCAATAACCTTACAAACTTCGTGAAGTTTTTTGAAGTCGTAAGTTTGAGTCTTTTGAT 781084 Query 71671 CTCCC---ATCTATTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACC 71727 || | | || ||||||| | ||||||||||| || | |||||||| || Sbjct 781085 CTTCKGAGACCT-TTACAAAGGCTGGTAAGGCAACAGARGCTAAGTTACAAACAGCAGTT 781143 Query 71728 TCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCT 71787 || ||| |||| | |||| | ||||||| || | ||| | | || || || || Sbjct 781144 TCCTTATCATCTGAGTATTCAACAATTTCACAACATAAGTTAGAAGATTTAATTGTACCC 781203 Query 71788 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCA 71847 || || | ||||||| ||||| ||||| |||||||| |||| ||| || ||||||||| Sbjct 781204 AAGTTCTTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAAGGAGTACCA 781263 Query 71848 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTG 71907 ||||| | || | ||||| || || | ||| | | ||||||| || | | || Sbjct 781264 GTTTCGGTTTGGGCTTCTAAGATGGCGTACCATAACTTTTGAGCCTTGATGGTCT--TTC 781321 Query 71908 TATCTCT--TTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCAT 71965 || |||| |||| ||||||||| ||| | ||| || || || || |||||| Sbjct 781322 TACCTCTACCTTCTAGTTCGTATTGGTCATAWAGCTTTTCAAAGTCATCACCATAAGCAT 781381 Query 71966 TGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTC 72025 || |||||| |||| | ||| | | || | ||| || |||| | || |||| Sbjct 781382 CRCTCAAACCAGGAGCTTCACTAGGAGAGAATAAAGTCCAATCACCATTTGCCTTGACTC 781441 Query 72026 GTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCT 72085 ||||| || | ||||||||||| | |||| |||| |||||| | ||| || | Sbjct 781442 TCTTCATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCTT 781501 Query 72086 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 72145 | || || ||| ||| | | |||| ||| | | |||||||| ||||| ||||| | Sbjct 781502 CCTTACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCCATGGTTCTA 781561 Query 72146 AGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 72205 ||| | || | | || || | |||||| || || ||||| | ||||| || |||| Sbjct 781562 GGTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACATATCTGGCAGTGT 781621 Query 72206 TATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATAT 72265 | || ||||||| | ||| ||||| | ||||||||| | ||||||||| || | || | Sbjct 781622 TGTTGAAAACTCTAACCATAGGAATCAAACCATTGGAAGTACCATTGGTACCAGCAATGT 781681 Query 72266 AGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGA 72325 | ||| ||| | || ||| ||| || ||| || || || || | ||||| | Sbjct 781682 AAGAGCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCKGCAGTCTTAGAAA 781741 Query 72326 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAA 72385 || || ||| || || ||||||||||| || || ||| ||||||| |||| || Sbjct 781742 TTTGAGCACATTCCTTYAAGGTATCATAGATACCGTCAATAGAATCATCCTTCATAGAAA 781801 Query 72386 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 72445 || ||||| ||||||||| | | ||| || ||||| |||| || ||||||| Sbjct 781802 TTAAGAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAAG 781861 Query 72446 CGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTAT-ATCC 72504 | || ||||| || ||| ||||| | ||||| || || || || ||| || | Sbjct 781862 CATGGGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTTCAATGTTTT 781921 Query 72505 CATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTG 72564 || | || || || || || || | ||| | || ||| || ||||||||||||||||| Sbjct 781922 CACCG-TGGATACCAACAGCAACTCTCATRATCAAATGTTGTGGTCTTTCAACGATCTTA 781980 Query 72565 TTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TG 72622 ||| || ||||| ||||| ||| ||||||| || || ||||||||||||||||| || Sbjct 781981 CCATTGATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAGTTG 782040 Query 72623 AAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAAC----- 72677 ||| |||| || | |||||| | || | |||| || | ||| |||| Sbjct 782041 AAA--TCTCTATCRAAGATAATAGTAGCATCTAAGGTATCTTTGTGTTTCATAACGGTTT 782098 Query 72678 TATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATA 72737 |||| ||| | | ||||| || ||||| |||||| | ||||| || Sbjct 782099 TATAAACATCATCA-----GAAATCATTGGAGACAAAACACCATTTCTTTCGTTAACGTA 782153 Query 72738 GTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATT--T 72795 |||| |||| || || || |||| | ||||| |||||| |||| |||||||| || | Sbjct 782154 GTTGTATAAGTCTTCGATAACTTGAGAAAATAATTTTTTGGTTTGCTTGTGTAAGTTACT 782213 Query 72796 GATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAGT-GGC 72854 ||| ||| ||||||||||| |||| |||||||| ||||| || || || || ||| Sbjct 782214 GAT--GGCAATTCTGGCGGCAAGAACAGCATAATCAGGATGAACAGTGGT-CATGTAGGC 782270 Query 72855 TGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTG 72914 |||| || || | | || ||||| | || || || || | || | || Sbjct 782271 ACAAGTTTCAGCGGCTAAGTTATCTAATTCGATGGTAGTAACACCTTCGTAGACACCGGA 782330 Query 72915 GATAACCTTCAT--AGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACAT 72972 ||||| ||| | | ||||| | |||||| ||||| | || | ||| ||||| ||| Sbjct 782331 GATAA--TTCTTTGGGTGATTTTGACAGGATCGATATGTTTAGCATCTAATCCATAGCAT 782388 Query 72973 AATTTTCTAATACGAGACGTGATTTTATCAAACATAAC----ATTTTCCCGGCATCCATT 73028 ||| | ||| | || || ||||||||||| ||| | ||| | ||| | Sbjct 782389 AATCTAGCAATTCTGGATGTAATTTTATCAAATTGAACTGGAACTTT----TCTTCCGTC 782444 Query 73029 TCGTTTAACGACAAACATTTTT 73050 || |||||| |||||||| ||| Sbjct 782445 TCTTTTAACAACAAACATGTTT 782466 >seq1 Length=1289090 Score = 181 bits (200), Expect = 1e-40 Identities = 575/885 (65%), Gaps = 14/885 (2%) Strand=Plus/Minus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 ||||| || ||| || | ||||| || ||||| ||||| || | || ||||| ||| Sbjct 688537 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 688478 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 ||||| || || || || ||||| ||||| | | |||| || || || | Sbjct 688477 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTTACCTAAGGCAACTAAT 688418 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953 |||||||| || | ||||| | |||| ||||| | ||| |||||| || | | | Sbjct 688417 AATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAAT 688358 Query 41954 TTAACTGGAAGAGCCACAGTAAGAAAT-TCTTGTTCAATAGAGACCGCGTCTGTTATAAT 42012 |||||||| || || || || |||| |||||| || || || | ||||| Sbjct 688357 GCAACTGGAATGGCATCAACAAAGTATCTCTT-TTCAATTTCAACAGCTTCAGCAATAAT 688299 Query 42013 AGATCTTAC--TGTTTCTTCACTC-GGTGGATACAATAAATGTTTAAACATCAAACATGC 42069 |||| | || | || || || | | ||| || |||| | ||| || Sbjct 688298 ---TCTTTCAATGATCTTTGGATCTGGCTTGTTCTTTAAGTGRGAGAACAATAGACAGGC 688242 Query 42070 GAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 42129 || || || | ||| |||||||||| || ||||||||||| || || | || || Sbjct 688241 AAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAGG 688182 Query 42130 CATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCC 42189 ||| | || || || | ||| || |||| |||||||| ||||| || |||| || Sbjct 688181 CATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACACC 688122 Query 42190 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCA---TAACCGGCACTGTCATGTATCCA 42246 ||| || || ||||| |||| ||||| || || || || | | || || ||||| Sbjct 688121 TTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATCCA 688062 Query 42247 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 42306 | |||||| || ||||| | || | ||| || |||||||| || || || | Sbjct 688061 TCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTTAATAA 688002 Query 42307 ATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGA 42366 | | ||||| || ||| || | ||||| || | || | | ||| |||| || Sbjct 688001 GAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGTTTCAGA 687942 Query 42367 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTAC 42426 ||||||||||| || || || || ||||||||||| | || || | || || || Sbjct 687941 GTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTGAAC 687882 Query 42427 TTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAA 42486 ||| | | | || |||| | || ||||| || || || || ||| || ||||| || Sbjct 687881 TTCAGCAGAGAARTTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAAGAA 687822 Query 42487 CGCCAATACATGTTTTATAAAATATTTTTC---GTCCGGTGTTAATTTATTCCAATCATT 42543 ||||| || | || ||| || |||| || || ||||||||||| | Sbjct 687821 AGCCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATCGTG 687762 Query 42544 GATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATA 42603 | ||| ||||| | ||| | |||||| | ||||| || || ||||| || | ||||| Sbjct 687761 TAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCTTATA 687702 Query 42604 CATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCT 42648 | ||| || || | ||| |||||||| | ||| ||||| Sbjct 687701 GGCTTCCCAAATTTCTGGGAATTTGATTGGGAATAAAACGAATCT 687657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139048993680