Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq1 244 9e-60
>seq1
Length=1289090
Score = 244 bits (270), Expect = 9e-60
Identities = 575/850 (68%), Gaps = 31/850 (4%)
Strand=Plus/Minus
Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919
|||||||| || |||||| |||||||| || || || || || |||| || || |||
Sbjct 688537 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 688478
Query 12920 TCCATAAAATCGAAAGGATTTTTCGAAC--AATAGTATTTT-TTACACCCTAATTCTAGT 12976
|||||||| ||||| || || | | || || ||| |||| |||| | | |
Sbjct 688477 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTTAC---CTAAGGCAACT 688421
Query 12977 AACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATT 13036
|| ||||| ||||||||||| || | || || ||||||| |||| ||||| || | |
Sbjct 688420 AATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGT 688361
Query 13037 AATTTTACAGGCATAGCTTCTGTTAAAAAGttt---ttttCTATATCAACTGCTTCGATA 13093
||| || || || || || | ||||| | ||||| || ||||| ||||| |
Sbjct 688360 AATGCAACTGGAATGGCATCA---ACAAAGTATCTCTTTTCAATTTCAACAGCTTCAGCA 688304
Query 13094 ACTATGTCTCTTATTACGTTCTCTAA---TGGAGGATTTGATAGATGCTTAAACATCATA 13150
| || |||| | | ||| | ||| || || || |||| | |
Sbjct 688303 ATAAT---TCTTTCAATGATCTTTGGATCTGGCTTGTTCTTTAAGTGRGAGAACAATAGA 688247
Query 13151 CATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGA 13210
|| ||||| ||| || || ||||||||||||| || | ||||| || || || | |
Sbjct 688246 CAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAA 688187
Query 13211 CCCGGCAT-AAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaa 13269
|| ||||| || |||| || || || ||| || ||||||||||| ||||| || |||||
Sbjct 688186 CCAGGCATCAAACCCTTTTTCTTCAA-CCAGAAGATAGCAGCAAATGAACCAGAGAAAAA 688128
Query 13270 TATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTC 13329
| |||||||| || ||||| || | || |||||| || || | | ||| |
Sbjct 688127 GACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTG 688068
Query 13330 TATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACG-CAGTTCATATTTTCTATTGCGT 13388
||||| | | ||||| | || |||| |||| ||| ||| ||||||| ||||
Sbjct 688067 AATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGA-ATAGTTTCTATAGCGT 688009
Query 13389 TAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACA 13448
| ||||| ||| |||||||| || || || || |||| ||||| |||
Sbjct 688008 TTAATAAGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAG 687949
Query 13449 TTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATA 13508
|||| || ||||| ||||||||| ||||||||||| || ||||| |||| |||| |
Sbjct 687948 TTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAA 687889
Query 13509 CCTGAACTTC-GGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCA 13567
|||||||| | || || | |||| | |||||||| || || || || ||| ||||
Sbjct 687888 TTTGAACTTCAGCAGAGAART-TTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCA 687830
Query 13568 GCaaaaaaaGCAAGTATGTGCTT--AATAAAttttttttCGTTTTCTGACA-ACT-TTA- 13622
||||| ||||| | | ||| ||| || | |||| ||||| || || |||
Sbjct 687829 GCAAAGAAAGCCA--AKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTAT 687772
Query 13623 ACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAG 13682
|||||| | ||||| || || ||||| | || ||| ||||||| |||||||| | |
Sbjct 687771 TCCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGG 687712
Query 13683 CCTTCTTATA 13692
| |||||||
Sbjct 687711 CTCTCTTATA 687702
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430982305453236
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |