Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq12 192 7e-44 seq17 159 4e-34 >seq12 Length=1055690 Score = 192 bits (212), Expect = 7e-44 Identities = 422/623 (68%), Gaps = 41/623 (7%) Strand=Plus/Minus Query 6810 TTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAAT 6869 ||||||||| | ||| | || ||| || |||| |||||||| || | || ||||| Sbjct 820675 TTGTTCTTTYAAAGCATCTACATGRTCCTTGTAAACGTGAGCATCACCCATGGTGTGAAT 820616 Query 6870 AAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGA 6929 ||||||||| | |||||||||| | | ||||| | || || || |||||||| Sbjct 820615 AAATTCACCACAATCCATATCAACAACCTTTGCAATCATTCTGGTCAACAAAGCATAAGA 820556 Query 6930 AGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTG--ATAACAT---TGA 6984 ||| | || ||||| ||||| || |||||||| |||||||| |||| || ||| Sbjct 820555 AGCAATGTTGAAAGGAACACCCAACCCCATATCACAAGATCTTTGGTATAAGATACATGA 820496 Query 6985 CAAGATAAAATATT-GTCTATAG---------CATAAAATTGACACAATACATGACATGG 7034 ||| | | || |||| ||| |||| |||||||| || || || ||||| Sbjct 820495 CAATTGAGGCTTTTGGTCTTTAGGGAAAGAAACATAGAATTGACAGAAAACGTGGCATGG 820436 Query 7035 AGGTAAAACAGCC-TGATCT--ATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCT 7091 || || |||| | ||| | || | |||||||||||||| ||| | || | ||| Sbjct 820435 CGG---AAGAGCCATTTTCTTAAAGTCTGGTGGATTCCAAGCAGACATGATGATTCTTCT 820379 Query 7092 ATCATTTGGATTTGTTTTTAA-TTTTGTTATAATTATTT---GTAATTGATC-TATACCC 7146 ||| | ||||| || || || || || |||||| | ||||||||| ||| || Sbjct 820378 ATCGTAAGGATTGGTCTTCAACTTATG----AATTATATCGCTTAATTGATCGTAT-CCT 820324 Query 7147 TGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAAC 7206 | | || | ||| ||||||| | ||| | ||| ||||||||||||||||| || Sbjct 820323 TTGTTTGTGTAGTCAGTGTGACAATCAACATATTCAGCACCAAAATGTCTCCATTGGAAA 820264 Query 7207 CCATAAATAGGACCTAAATCACCTTCTTCACGATGATTAAATCCTAATCGATTTAAATTA 7266 ||||||| ||||||||||||||||||||| | | | | || || | || || || Sbjct 820263 CCATAAACAGGACCTAAATCACCTTCTTCTCTGTCAGTTAACCCAA---GA--GAATCTA 820209 Query 7267 GATTTT-----GATCCATAAGCATCCCAAATATGTACAGAtttttttGATAAATTTAAAG 7321 | | || || |||| | |||||||||| | || || |||| || |||| Sbjct 820208 GGTATTSACGAGAACCATTACCATCCCAAATTTTGACGCCTTCTTTTTGTAGATTTTTGT 820149 Query 7322 AATTTGTAGATCCTTTAAGGAACCATAAAAGTTCTTCTACTATTCCACGCCAAAACATTC 7381 ||| ||| ||| |||| ||||| | ||||||| || || | ||| | || Sbjct 820148 TATTGGTATCTCCCTTAACAAACCAAAGAAGTTCTAATATAATAGCTTTGGTAAATACTC 820089 Query 7382 TTTTTGTAGTGAATAAAGGGAAT 7404 | ||||| || |||||||| ||| Sbjct 820088 TYTTTGTTGTTAATAAAGGAAAT 820066 Score = 84.2 bits (92), Expect = 3e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 19341 TAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAG 19400 ||||| | ||||| | || |||| ||||| || ||||||||| || |||||| | Sbjct 609925 TAAGAACCACTAAAGTTCCACAAATTGGTGACAAATTTGCTTCTAGACATGGTCAAAAGG 609866 Query 19401 GCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGC 19460 | ||| |||||| | || | |||||||||||| || ||| || ||||| |||| Sbjct 609865 GTACAATTGGTATTACCTACAGAAGAGAAGATATGCCGTTCACTGCTGAAGGTATTGTGC 609806 Query 19461 CGGATCTTATTATTAACCCACATGCTTTTCC 19491 | ||| | ||||| || || |||||| |||| Sbjct 609805 CTGATTTGATTATCAATCCCCATGCTATTCC 609775 >seq17 Length=230754 Score = 159 bits (176), Expect = 4e-34 Identities = 396/596 (66%), Gaps = 24/596 (4%) Strand=Plus/Minus Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457 || |||||||| ||||| || ||||| || ||| ||||| ||| ||||||||| || Sbjct 69124 AAGTTTGAAGATATGGGTGTTGGTGGGCTGGATAAGGAATTCACTCAAATTTTCAGAAGA 69065 Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517 || |||||||| ||| | | ||| || | ||| ||||| || | || | Sbjct 69064 GCCTTTGCTTCAAGAATATTCCCTCCGCAAGTCATAGCCAAATTGGGTATTTCCCACGTC 69005 Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577 ||||| ||||| || | || ||||| ||| ||||| || || || || || ||| Sbjct 69004 AAAGGTCTTTTACTATACGGTCCTCCAGGTACAGGTAAGACTTTGATTGCGAGAAAAATT 68945 Query 164578 GCTCAAGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAA 164633 | | || | || ||| || || || ||| |||||||||||||||||| |||||| Sbjct 68944 GGT-AATATGTTGAAT-GCAAAAGAACC--TAAGATTGTTAATGGTCCTGAAATATTGAG 68889 Query 164634 CAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGA 164693 || ||||| ||| || |||| || ||||||| ||||| |||| ||||| |||| Sbjct 68888 TAAGTATGTTGGTTCTTCTGAAGAAAACATTAGAAATTTGTTCAAGGATGCTGAGCAAGA 68829 Query 164694 ACAAAAGAAAGCAGGTTTAGCTAGTAA--ATTACATGTTATTGTTTTTGATGAGATAGAT 164751 | | ||| |||| || | | | ||||| ||||| | |||||||| | ||| Sbjct 68828 ATATAAGTCTAAAGGTGAAG--AATCATCTTTACACATTATTATCTTTGATGAATTGGAT 68771 Query 164752 GCTCTTTGCAAAAA---------ACGTGGTGATAATA---TTATTCATGATGCAGTGGTT 164799 || ||| |||| | | | |||||| || | | |||| || ||| Sbjct 68770 TCTGTTTTCAAACAAAGAGGTTCAAGAGGTGATGGTACAGGTGTAGGTGATAATGTTGTT 68711 Query 164800 AATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAGGT 164859 || |||||| | | || || |||||||| || |||||||||||||| || | ||| Sbjct 68710 AACCAGTTGTTAGCCAAGATGGATGGTGTTGATCAATTAAATAATATTTTGGTTATTGGT 68651 Query 164860 ATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATTG 164919 ||||| || || ||| | || ||| | ||| | || |||| ||| |||| ||| | Sbjct 68650 ATGACAAATAGAAGAGATCTTATAGATAACGCTCTTTTGAGACCAGGTAGATTTGAAGTT 68591 Query 164920 AAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTTCA 164975 || | ||||| |||| || ||| || | | ||||||||| || |||| Sbjct 68590 CAAGTTGAAATCAAGCTACCTGATGAAGCTGGTAGATTGCAAATTTTAGAAATTCA 68535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871865928800