Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq12 192 7e-44
seq17 159 4e-34
>seq12
Length=1055690
Score = 192 bits (212), Expect = 7e-44
Identities = 422/623 (68%), Gaps = 41/623 (7%)
Strand=Plus/Minus
Query 6810 TTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAAT 6869
||||||||| | ||| | || ||| || |||| |||||||| || | || |||||
Sbjct 820675 TTGTTCTTTYAAAGCATCTACATGRTCCTTGTAAACGTGAGCATCACCCATGGTGTGAAT 820616
Query 6870 AAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGA 6929
||||||||| | |||||||||| | | ||||| | || || || ||||||||
Sbjct 820615 AAATTCACCACAATCCATATCAACAACCTTTGCAATCATTCTGGTCAACAAAGCATAAGA 820556
Query 6930 AGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTG--ATAACAT---TGA 6984
||| | || ||||| ||||| || |||||||| |||||||| |||| || |||
Sbjct 820555 AGCAATGTTGAAAGGAACACCCAACCCCATATCACAAGATCTTTGGTATAAGATACATGA 820496
Query 6985 CAAGATAAAATATT-GTCTATAG---------CATAAAATTGACACAATACATGACATGG 7034
||| | | || |||| ||| |||| |||||||| || || || |||||
Sbjct 820495 CAATTGAGGCTTTTGGTCTTTAGGGAAAGAAACATAGAATTGACAGAAAACGTGGCATGG 820436
Query 7035 AGGTAAAACAGCC-TGATCT--ATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCT 7091
|| || |||| | ||| | || | |||||||||||||| ||| | || | |||
Sbjct 820435 CGG---AAGAGCCATTTTCTTAAAGTCTGGTGGATTCCAAGCAGACATGATGATTCTTCT 820379
Query 7092 ATCATTTGGATTTGTTTTTAA-TTTTGTTATAATTATTT---GTAATTGATC-TATACCC 7146
||| | ||||| || || || || || |||||| | ||||||||| ||| ||
Sbjct 820378 ATCGTAAGGATTGGTCTTCAACTTATG----AATTATATCGCTTAATTGATCGTAT-CCT 820324
Query 7147 TGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAAC 7206
| | || | ||| ||||||| | ||| | ||| ||||||||||||||||| ||
Sbjct 820323 TTGTTTGTGTAGTCAGTGTGACAATCAACATATTCAGCACCAAAATGTCTCCATTGGAAA 820264
Query 7207 CCATAAATAGGACCTAAATCACCTTCTTCACGATGATTAAATCCTAATCGATTTAAATTA 7266
||||||| ||||||||||||||||||||| | | | | || || | || || ||
Sbjct 820263 CCATAAACAGGACCTAAATCACCTTCTTCTCTGTCAGTTAACCCAA---GA--GAATCTA 820209
Query 7267 GATTTT-----GATCCATAAGCATCCCAAATATGTACAGAtttttttGATAAATTTAAAG 7321
| | || || |||| | |||||||||| | || || |||| || ||||
Sbjct 820208 GGTATTSACGAGAACCATTACCATCCCAAATTTTGACGCCTTCTTTTTGTAGATTTTTGT 820149
Query 7322 AATTTGTAGATCCTTTAAGGAACCATAAAAGTTCTTCTACTATTCCACGCCAAAACATTC 7381
||| ||| ||| |||| ||||| | ||||||| || || | ||| | ||
Sbjct 820148 TATTGGTATCTCCCTTAACAAACCAAAGAAGTTCTAATATAATAGCTTTGGTAAATACTC 820089
Query 7382 TTTTTGTAGTGAATAAAGGGAAT 7404
| ||||| || |||||||| |||
Sbjct 820088 TYTTTGTTGTTAATAAAGGAAAT 820066
Score = 84.2 bits (92), Expect = 3e-11
Identities = 109/151 (72%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 19341 TAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAG 19400
||||| | ||||| | || |||| ||||| || ||||||||| || |||||| |
Sbjct 609925 TAAGAACCACTAAAGTTCCACAAATTGGTGACAAATTTGCTTCTAGACATGGTCAAAAGG 609866
Query 19401 GCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGC 19460
| ||| |||||| | || | |||||||||||| || ||| || ||||| ||||
Sbjct 609865 GTACAATTGGTATTACCTACAGAAGAGAAGATATGCCGTTCACTGCTGAAGGTATTGTGC 609806
Query 19461 CGGATCTTATTATTAACCCACATGCTTTTCC 19491
| ||| | ||||| || || |||||| ||||
Sbjct 609805 CTGATTTGATTATCAATCCCCATGCTATTCC 609775
>seq17
Length=230754
Score = 159 bits (176), Expect = 4e-34
Identities = 396/596 (66%), Gaps = 24/596 (4%)
Strand=Plus/Minus
Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457
|| |||||||| ||||| || ||||| || ||| ||||| ||| ||||||||| ||
Sbjct 69124 AAGTTTGAAGATATGGGTGTTGGTGGGCTGGATAAGGAATTCACTCAAATTTTCAGAAGA 69065
Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517
|| |||||||| ||| | | ||| || | ||| ||||| || | || |
Sbjct 69064 GCCTTTGCTTCAAGAATATTCCCTCCGCAAGTCATAGCCAAATTGGGTATTTCCCACGTC 69005
Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577
||||| ||||| || | || ||||| ||| ||||| || || || || || |||
Sbjct 69004 AAAGGTCTTTTACTATACGGTCCTCCAGGTACAGGTAAGACTTTGATTGCGAGAAAAATT 68945
Query 164578 GCTCAAGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAA 164633
| | || | || ||| || || || ||| |||||||||||||||||| ||||||
Sbjct 68944 GGT-AATATGTTGAAT-GCAAAAGAACC--TAAGATTGTTAATGGTCCTGAAATATTGAG 68889
Query 164634 CAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGA 164693
|| ||||| ||| || |||| || ||||||| ||||| |||| ||||| ||||
Sbjct 68888 TAAGTATGTTGGTTCTTCTGAAGAAAACATTAGAAATTTGTTCAAGGATGCTGAGCAAGA 68829
Query 164694 ACAAAAGAAAGCAGGTTTAGCTAGTAA--ATTACATGTTATTGTTTTTGATGAGATAGAT 164751
| | ||| |||| || | | | ||||| ||||| | |||||||| | |||
Sbjct 68828 ATATAAGTCTAAAGGTGAAG--AATCATCTTTACACATTATTATCTTTGATGAATTGGAT 68771
Query 164752 GCTCTTTGCAAAAA---------ACGTGGTGATAATA---TTATTCATGATGCAGTGGTT 164799
|| ||| |||| | | | |||||| || | | |||| || |||
Sbjct 68770 TCTGTTTTCAAACAAAGAGGTTCAAGAGGTGATGGTACAGGTGTAGGTGATAATGTTGTT 68711
Query 164800 AATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAGGT 164859
|| |||||| | | || || |||||||| || |||||||||||||| || | |||
Sbjct 68710 AACCAGTTGTTAGCCAAGATGGATGGTGTTGATCAATTAAATAATATTTTGGTTATTGGT 68651
Query 164860 ATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATTG 164919
||||| || || ||| | || ||| | ||| | || |||| ||| |||| ||| |
Sbjct 68650 ATGACAAATAGAAGAGATCTTATAGATAACGCTCTTTTGAGACCAGGTAGATTTGAAGTT 68591
Query 164920 AAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTTCA 164975
|| | ||||| |||| || ||| || | | ||||||||| || ||||
Sbjct 68590 CAAGTTGAAATCAAGCTACCTGATGAAGCTGGTAGATTGCAAATTTTAGAAATTCA 68535
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595871865928800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |