Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq18 122 8e-23
seq15 122 8e-23
seq16 120 3e-22
>seq18
Length=436904
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| |||| || || ||||| ||||| ||||| ||||| | ||| || ||
Sbjct 25614 CCACCTCTTAATCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAT 25555
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||| || | || || || | |||||||||||||| ||||| || |||
Sbjct 25554 AAAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGGA 25495
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||||||||| | ||||| ||||| || | ||| || |||| |||||
Sbjct 25494 ATACCTTCTTTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGACC 25435
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || ||||| || ||||| |||||||| || || || |||||
Sbjct 25434 TCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCAT 25388
>seq15
Length=137011
Score = 122 bits (134), Expect = 8e-23
Identities = 162/223 (73%), Gaps = 4/223 (2%)
Strand=Plus/Plus
Query 94778 ACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCG 94837
|| || |||||||||| | || ||||| | ||||||||| ||||| | ||| |||||
Sbjct 38885 ACACCACCTCTCAATCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCA 38944
Query 94838 CTCATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTG 94895
||| ||| | || || | ||||| || |||||||||||||||| ||||| |
Sbjct 38945 G--ATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAG 39002
Query 94896 GAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGT 94955
| ||||||||||| ||||| | || || |||||||| ||| | | ||| ||||| |
Sbjct 39003 GTGGAATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATT 39062
Query 94956 CGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998
|||| || | |||||||| || || || | || || |||||
Sbjct 39063 CGACTTCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGACAAA 39105
>seq16
Length=726111
Score = 120 bits (132), Expect = 3e-22
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| |||| || || | || | ||| ||||| ||||| | ||| |||||
Sbjct 202566 CCACCTCTTAATCTTAAGACTAGATGGAGAGTGGATTCTTTTTGAATGTTGTAATCAG-- 202509
Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898
||| |||| | ||| || | ||||| ||| | || || |||||||| ||||| ||||
Sbjct 202508 ATAATGTTCTACCATCTTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCAGGAG 202449
Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958
|||||||||| || || | ||||| | ||||| ||| ||| || |||| || |
Sbjct 202448 GAATACCTTCCTTATCTTGGATTTTAGATTTGACAGCGTCGATAGAGTCACTAGATTCAA 202389
Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || | |||||||| || ||||| | |||||| |||||||| |||||
Sbjct 202388 CTTCTAAAGTGATGGTCTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 202340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448291099134480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |