Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq18 122 8e-23 seq15 122 8e-23 seq16 120 3e-22 >seq18 Length=436904 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| |||| || || ||||| ||||| ||||| ||||| | ||| || || Sbjct 25614 CCACCTCTTAATCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAT 25555 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| || | || || || | |||||||||||||| ||||| || ||| Sbjct 25554 AAAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGGA 25495 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 |||||||||||||| | ||||| ||||| || | ||| || |||| ||||| Sbjct 25494 ATACCTTCTTTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGACC 25435 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || ||||| || ||||| |||||||| || || || ||||| Sbjct 25434 TCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCAT 25388 >seq15 Length=137011 Score = 122 bits (134), Expect = 8e-23 Identities = 162/223 (73%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 94778 ACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCG 94837 || || |||||||||| | || ||||| | ||||||||| ||||| | ||| ||||| Sbjct 38885 ACACCACCTCTCAATCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCA 38944 Query 94838 CTCATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTG 94895 ||| ||| | || || | ||||| || |||||||||||||||| ||||| | Sbjct 38945 G--ATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAG 39002 Query 94896 GAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGT 94955 | ||||||||||| ||||| | || || |||||||| ||| | | ||| ||||| | Sbjct 39003 GTGGAATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATT 39062 Query 94956 CGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998 |||| || | |||||||| || || || | || || ||||| Sbjct 39063 CGACTTCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGACAAA 39105 >seq16 Length=726111 Score = 120 bits (132), Expect = 3e-22 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| |||| || || | || | ||| ||||| ||||| | ||| ||||| Sbjct 202566 CCACCTCTTAATCTTAAGACTAGATGGAGAGTGGATTCTTTTTGAATGTTGTAATCAG-- 202509 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 ||| |||| | ||| || | ||||| ||| | || || |||||||| ||||| |||| Sbjct 202508 ATAATGTTCTACCATCTTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCAGGAG 202449 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 |||||||||| || || | ||||| | ||||| ||| ||| || |||| || | Sbjct 202448 GAATACCTTCCTTATCTTGGATTTTAGATTTGACAGCGTCGATAGAGTCACTAGATTCAA 202389 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | |||||||| || ||||| | |||||| |||||||| ||||| Sbjct 202388 CTTCTAAAGTGATGGTCTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 202340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448291099134480