Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq1 232 7e-56 >seq1 Length=1289090 Score = 232 bits (256), Expect = 7e-56 Identities = 550/825 (67%), Gaps = 23/825 (3%) Strand=Plus/Minus Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244 |||||||||||| |||||| ||||| || ||||| ||||| || | || ||||| | Sbjct 688537 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 688478 Query 21245 TCCATAAAATCAAATGGATTT-TCAGATTTAA-ATATTTTATTACAACCCAGTTCTGATA 21302 |||||||| || ||||| || | | ||| || | |||| | ||| | | || Sbjct 688477 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTT--ACCTAAGGCAACTA 688420 Query 21303 ATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCA 21362 |||||||||| || |||||||| | |||||| ||||| ||| ||||||||| | | Sbjct 688419 ATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTA 688360 Query 21363 ATTTTACAGGAAGAGCTTTTGTCAAAAAAG-AT---TTTTCTATAGAGACGGCTTCAACA 21418 || || |||| || | ||| |||| || ||||| || || |||||| || Sbjct 688359 ATGCAACTGGAATGGCAT----CAACAAAGTATCTCTTTTCAATTTCAACAGCTTCAGCA 688304 Query 21419 ATTATATTT---ATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAA 21475 || || || || ||| | | | || | | | | ||| || |||| | | Sbjct 688303 ATAATTCTTTCAATGATCTTTG--GATCTGGCTTGTT-CTTTAAGTGRGAGAACAATAGA 688247 Query 21476 CATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAA 21535 || ||||| ||| ||| ||||||||||| |||| || ||||| || || || || ||| Sbjct 688246 CAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAA 688187 Query 21536 CCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAA 21595 || ||||| || || | || || ||||| || || | ||||||| || || || || Sbjct 688186 CCAGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAG 688127 Query 21596 ATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAAT 21655 | || ||||| |||||||| ||||| | || |||| | | || || ||||| Sbjct 688126 ACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGA 688067 Query 21656 ATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTT 21715 |||||| | ||||||| |||||||| ||||| | ||| || || ||||| ||| Sbjct 688066 ATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTT 688007 Query 21716 AA-AAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACAT 21774 || |||| || ||||| | | ||| | ||| | ||| | Sbjct 688006 AATAAGA-AATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGT 687948 Query 21775 TTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACA 21834 |||||| || || ||||| ||| || || || ||||| ||||| | || |||| | Sbjct 687947 TTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAAT 687888 Query 21835 TTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGC 21894 |||||| || | | | || || | ||||||||||||| || || |||||| || || Sbjct 687887 TTGAACTTCAGCAGAGAARTTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGC 687828 Query 21895 AAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT---TTTTTCCA 21951 ||| || ||||| | || || ||| ||| ||| || || | | | || ||||| Sbjct 687827 AAAGAAAGCCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCA 687768 Query 21952 ATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA 21996 ||| |||||| || || ||||| | |||||||| ||||| || Sbjct 687767 ATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAA 687723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900680322320