Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq1 232 7e-56
>seq1
Length=1289090
Score = 232 bits (256), Expect = 7e-56
Identities = 550/825 (67%), Gaps = 23/825 (3%)
Strand=Plus/Minus
Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244
|||||||||||| |||||| ||||| || ||||| ||||| || | || ||||| |
Sbjct 688537 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 688478
Query 21245 TCCATAAAATCAAATGGATTT-TCAGATTTAA-ATATTTTATTACAACCCAGTTCTGATA 21302
|||||||| || ||||| || | | ||| || | |||| | ||| | | ||
Sbjct 688477 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTT--ACCTAAGGCAACTA 688420
Query 21303 ATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCA 21362
|||||||||| || |||||||| | |||||| ||||| ||| ||||||||| | |
Sbjct 688419 ATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTA 688360
Query 21363 ATTTTACAGGAAGAGCTTTTGTCAAAAAAG-AT---TTTTCTATAGAGACGGCTTCAACA 21418
|| || |||| || | ||| |||| || ||||| || || |||||| ||
Sbjct 688359 ATGCAACTGGAATGGCAT----CAACAAAGTATCTCTTTTCAATTTCAACAGCTTCAGCA 688304
Query 21419 ATTATATTT---ATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAA 21475
|| || || || ||| | | | || | | | | ||| || |||| | |
Sbjct 688303 ATAATTCTTTCAATGATCTTTG--GATCTGGCTTGTT-CTTTAAGTGRGAGAACAATAGA 688247
Query 21476 CATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAA 21535
|| ||||| ||| ||| ||||||||||| |||| || ||||| || || || || |||
Sbjct 688246 CAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAA 688187
Query 21536 CCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAA 21595
|| ||||| || || | || || ||||| || || | ||||||| || || || ||
Sbjct 688186 CCAGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAG 688127
Query 21596 ATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAAT 21655
| || ||||| |||||||| ||||| | || |||| | | || || |||||
Sbjct 688126 ACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGA 688067
Query 21656 ATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTT 21715
|||||| | ||||||| |||||||| ||||| | ||| || || ||||| |||
Sbjct 688066 ATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTT 688007
Query 21716 AA-AAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACAT 21774
|| |||| || ||||| | | ||| | ||| | ||| |
Sbjct 688006 AATAAGA-AATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGT 687948
Query 21775 TTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACA 21834
|||||| || || ||||| ||| || || || ||||| ||||| | || |||| |
Sbjct 687947 TTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAAT 687888
Query 21835 TTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGC 21894
|||||| || | | | || || | ||||||||||||| || || |||||| || ||
Sbjct 687887 TTGAACTTCAGCAGAGAARTTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGC 687828
Query 21895 AAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT---TTTTTCCA 21951
||| || ||||| | || || ||| ||| ||| || || | | | || |||||
Sbjct 687827 AAAGAAAGCCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCA 687768
Query 21952 ATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA 21996
||| |||||| || || ||||| | |||||||| ||||| ||
Sbjct 687767 ATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAA 687723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531900680322320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |