Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq14 426 2e-114
seq1 183 4e-41
>seq14
Length=1507144
Score = 426 bits (472), Expect = 2e-114
Identities = 1490/2298 (65%), Gaps = 75/2298 (3%)
Strand=Plus/Plus
Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054
||||||||||| | || || || | || || | | |||||||| || || || | |
Sbjct 780196 GTGAATTGAATAGCGGCTGAGGCAGCTTGTGTTCTCAAGTAGTACATACCAGTCTTCAAA 780255
Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATC-TGCTA 62112
|| ||||| ||||| || ||||| |||| || ||| | || | || |
Sbjct 780256 CCCTTGCTCCAACCGTAGAAGTGCATGGAAGTTAACTTACCCATAGTTGGGGCCATG--A 780313
Query 62113 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 62172
| || || ||||| || ||| |||||| ||||| ||| || || || ||||| | |
Sbjct 780314 TGTGAATGTTCATGGAATGAGATTGATCAATGAAAGCTTGTCTATCAGCGGCCATATCAA 780373
Query 62173 TGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 62231
|||| |||||||||| | |||||||| ||||||||| || || ||| || |||| |||
Sbjct 780374 TGATAGTCTTTTGTGATAATTCCCAAACAGTTTTATACAAATC-CTTCATTTCTTGAGGA 780432
Query 62232 AGGTTTGT--ATTCT-GAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCA 62288
| ||||| ||| | | || || ||| | || || || || ||| || | |||
Sbjct 780433 ATGTTTGGCAATTGTTGGATAGAACCATTGTTAGCAATGATATTAGACTTCATGGCTTCA 780492
Query 62289 TTCCATAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTC 62347
| ||| ||| | | || |||| | | | | | || || || | ||| ||||
Sbjct 780493 TCCCA-AATACCCATATCAACTAAATCCTTCAATAAGTATGGGTTGACAATTTGGTATTC 780551
Query 62348 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATT 62407
||||| || ||| | || ||| || ||| || | ||||| | | ||||| |
Sbjct 780552 ACCAGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGGTTCGAAACATTCATTGTA 780611
Query 62408 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAG 62467
|| |||||||| | ||| || ||||| |||||||| || |||||||| ||||| |
Sbjct 780612 ACCTAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAA 780671
Query 62468 ACCGTATGTTCTGATTTTATCTTTTAGAGGTTC---CCAATTCCAAAGATCCGACGGTAC 62524
||||| | || ||| | || | ||| ||||| ||| | | || |
Sbjct 780672 ACCGTGCTTGGCAATCTTAGCCTTCAA---TTCAGTCCAATCCCATARGGTAGTTGGAGC 780728
Query 62525 AACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATC 62584
||| ||||| || ||| | | || || ||| | || | | |
Sbjct 780729 AACGTTCCAGAAATCGTATTGTAAAACACCTTGAGAAGCTGGAGAACCTTCGTAAGAAGC 780788
Query 62585 GTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGT 62644
|| | |||||| | ||||||| |||| || || || ||| ||| |||||||||
Sbjct 780789 ATAGGTTCCTTCAATTTCAGCTAATTCAGTGGAAGCTTCCAAAGCAGCGTGATAAATGGT 780848
Query 62645 TTCGAAGATCTTCTTATTTAGATCTTGTGCTTC--CAGGCTATCAAATGGATAATTTAAG 62702
|||||| || | | || | || | |||| ||| ||| |||||| ||||
Sbjct 780849 TTCGAAAATTTGAATGTTCAATTCYTTGGCTTTTTCAGA--ATCGAATGGAACTCTTAAC 780906
Query 62703 AGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 62762
| ||||| | || || || ||||||||||| | | |||||||| |||||| | |||
Sbjct 780907 ATCATAAAAGTATCAGCCAAACCTTGAACACCTACGGCAATAGGTCTGTGTCTCATGTTA 780966
Query 62763 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 62822
|| || ||| | || ||| ||||| || | || |||| || | | ||||
Sbjct 780967 GATCTTCTAGCAGTTTCAACAGGGTAATAGTTTCTGTCAATAACAGCGTTTA-AGTTCTT 781025
Query 62823 A-CAATTACTTTGACCACATCCTTCAGTTTGAGAAAATC--AAATC---GCCC----ATC 62872
| |||| || || || || | ||||| || || || | | | |||
Sbjct 781026 AGCAATAACCTTACAAACTTCGTGAAGTTTTTTGAAGTCGTAAGTTTGAGTCTTTTGATC 781085
Query 62873 TA---------TTACAAACA-TGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCT 62922
| ||||||| || | ||||||||||| || | |||||||| || |
Sbjct 781086 TTCKGAGACCTTTACAAAGGCTGGT-AAGGCAACAGARGCTAAGTTACAAACAGCAGTTT 781144
Query 62923 CATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTA 62982
| ||| |||| | |||| | || ||| || | ||| | | || || || || |
Sbjct 781145 CCTTATCATCTGAGTATTCAACAATTTCACAACATAAGTTAGAAGATTTAATTGTACCCA 781204
Query 62983 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAG 63042
| || | ||||||| ||||| ||||| |||||||| |||| |||||| ||||||||||
Sbjct 781205 AGTTCTTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAAGGAGTACCAG 781264
Query 63043 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGT 63102
|||| | || | ||||| || || | ||| | | ||||||| || | ||| |
Sbjct 781265 TTTCGGTTTGGGCTTCTAAGATGGCGTACCATAACTTTTGAGCCTTGATGGT--CTTTCT 781322
Query 63103 A--TCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATT 63160
| ||| | |||| ||||||| | ||| | ||| || || || || || |||
Sbjct 781323 ACCTCTACCTTCTAGTTCGTATTGGTCATAWAGCTTTTCAAAGTCATCACCATAAGCATC 781382
Query 63161 GTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 63220
||| |||||| |||| ||| | | || | ||| || || | |||| ||||
Sbjct 781383 RCTCAAACCAGGAGCTTCACTAGGAGAGAATAAAGTCCAATCACCATTTGCCTTGACTCT 781442
Query 63221 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTC 63280
||||| || | ||||||||||| | |||| |||| |||||| | ||| ||| ||
Sbjct 781443 CTTCATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCTTC 781502
Query 63281 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 63340
|| || ||| ||| | | |||| ||| | | |||||||| ||||| ||||| |
Sbjct 781503 CTTACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCCATGGTTCTAG 781562
Query 63341 GTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 63400
||| | || | | ||||| | |||||| || || ||||| | ||||| || |||||
Sbjct 781563 GTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACATATCTGGCAGTGTT 781622
Query 63401 ATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATA 63460
|| ||||||| | ||| ||||| | ||| || || ||||||||||||| | || ||
Sbjct 781623 GTTGAAAACTCTAACCATAGGAATCAAACCATTGGAAGTACCATTGGTACCAGCAATGTA 781682
Query 63461 GCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 63520
||| ||| | || || ||| || ||| || || || || | ||||| ||
Sbjct 781683 AGAGCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCKGCAGTCTTAGAAAT 781742
Query 63521 TAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAG 63580
| || ||| || || || ||||||||||| || || |||||| |||| ||
Sbjct 781743 TTGAGCACATTCCTTYAAGGTATCATAGATACCGTCAATAGAATCATCCTTCATAGAAAT 781802
Query 63581 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 63640
|| ||||| ||||||||| | | ||| || ||||| |||| || ||||||||
Sbjct 781803 TAAGAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAAGC 781862
Query 63641 GTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT-ATCCC 63699
|| ||||| || ||| ||| | | ||||| || || || || || || | |
Sbjct 781863 ATGGGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTTCAATGTTTTC 781922
Query 63700 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 63759
| | || || || || || || | ||| | || || || |||||||||||||||||
Sbjct 781923 ACCG-TGGATACCAACAGCAACTCTCATRATCAAATGTTGTGGTCTTTCAACGATCTTAC 781981
Query 63760 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGA 63817
|| || ||||| ||||| ||| ||||||| || || ||||||||||||||||| |||
Sbjct 781982 CATTGATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAGTTGA 782041
Query 63818 AAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAAC-----T 63872
|| |||| || | |||||| | | | |||| || | ||| |||| |
Sbjct 782042 AA--TCTCTATCRAAGATAATAGTAGCATCTAAGGTATCTTTGTGTTTCATAACGGTTTT 782099
Query 63873 ATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAG 63932
||| ||| | | ||||| || ||||| |||||| | ||||| |||
Sbjct 782100 ATAAACATCATCA-----GAAATCATTGGAGACAAAACACCATTTCTTTCGTTAACGTAG 782154
Query 63933 TTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATT--TG 63990
||| |||| || || || |||| | ||||| |||||| |||| |||||||| || ||
Sbjct 782155 TTGTATAAGTCTTCGATAACTTGAGAAAATAATTTTTTGGTTTGCTTGTGTAAGTTACTG 782214
Query 63991 ATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCT 64049
|| ||| ||||||||||| |||| |||||||| ||||| || || || || |||
Sbjct 782215 AT--GGCAATTCTGGCGGCAAGAACAGCATAATCAGGATGAACAGTGGT-CATGTAGGCA 782271
Query 64050 GCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGA 64109
|||| || || | | || ||||| | || || || || | || | ||
Sbjct 782272 CAAGTTTCAGCGGCTAAGTTATCTAATTCGATGGTAGTAACACCTTCGTAGACACCGGAG 782331
Query 64110 ATAACCTTCAT--AGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAACATA 64167
|||| ||| | | ||||| | |||||| ||||| | | | ||| ||||| ||||
Sbjct 782332 ATAA--TTCTTTGGGTGATTTTGACAGGATCGATATGTTTAGCATCTAATCCATAGCATA 782389
Query 64168 ATTTTCTAATACGAGACGTGATTTTATCAAACATGACATTTTCCTTGT-ATCCATTTCGT 64226
|| | ||| | || || ||||||||||| ||| | ||| | ||| | || |
Sbjct 782390 ATCTAGCAATTCTGGATGTAATTTTATCAAA-TTGAACTGGAACTTTTCTTCCGTCTCTT 782448
Query 64227 TTAATGACAAACATTTTT 64244
|||| |||||||| |||
Sbjct 782449 TTAACAACAAACATGTTT 782466
>seq1
Length=1289090
Score = 183 bits (202), Expect = 4e-41
Identities = 574/883 (65%), Gaps = 10/883 (1%)
Strand=Plus/Minus
Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072
||||| || ||| || | ||||| || ||||| || || || | || ||||| |||
Sbjct 688537 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 688478
Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132
||||| || || || || ||||| ||||| | | |||| || || || |
Sbjct 688477 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTTACCTAAGGCAACTAAT 688418
Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192
|||||||| || || ||||| | |||| ||||| | ||| |||||| || | | |
Sbjct 688417 AATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAAT 688358
Query 33193 TTAACTGGAAGAGCCGCAGTAAGAAAT-TCTTGTTCAATGGATACCGCATCTGTTATAAT 33251
|||||||| || || || || |||| |||||| || || || | |||||
Sbjct 688357 GCAACTGGAATGGCATCAACAAAGTATCTCTT-TTCAATTTCAACAGCTTCAGCAATAAT 688299
Query 33252 AGATCTAACGGTTTCTTCA-CTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 33310
| || | | | | | || | | | | | ||| || |||| | ||| || |
Sbjct 688298 TCTTTCAATGATCTTTGGATCTGGCTTGTT-CTTTAAGTGRGAGAACAATAGACAGGCAA 688240
Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370
| || || | ||| || ||||||| || | ||||||||| || || | || ||||
Sbjct 688239 AGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAGGCA 688180
Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTT 33430
| | || || || | ||| || || | ||| ||||| ||||| || |||| ||||
Sbjct 688179 TCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACACCTT 688120
Query 33431 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACT 33487
| || |||||||| |||| ||||| || || | | || | | || || |||||
Sbjct 688119 CAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATCCATC 688060
Query 33488 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33547
| |||||| || ||||| | || | ||| || |||||||| || || || |
Sbjct 688059 TAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTTAATAAGA 688000
Query 33548 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33607
| | ||||| || ||| || | || || || | || | | ||| |||| || |
Sbjct 687999 AATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGTTTCAGAGT 687940
Query 33608 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT 33667
|||||||||| || || || || ||||||||||| |||| || | ||| || ||||
Sbjct 687939 GAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTGAACTT 687880
Query 33668 CTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 33727
| | | | || ||| |||| |||||||| || || || ||| || ||||| || |
Sbjct 687879 CAGCAGAGAARTTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAAGAAAG 687820
Query 33728 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATTGA 33784
|||| || | || ||| || |||| | | | | | ||||||||||| | |
Sbjct 687819 CCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATCGTGTA 687760
Query 33785 TATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 33844
||| ||||| | ||| | |||||| | ||||| || || || || || | |||||
Sbjct 687759 AATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCTTATAGG 687700
Query 33845 TGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCT 33887
| ||| || || ||| ||||||||| | ||| |||||
Sbjct 687699 CTTCCCAAATTTCTGGGAATTTGATTGGGAATAAAACGAATCT 687657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622947059836880
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