Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq14 149 2e-30 seq1 147 6e-30 seq12 91.5 4e-13 >seq14 Length=1507144 Score = 149 bits (164), Expect = 2e-30 Identities = 612/946 (65%), Gaps = 21/946 (2%) Strand=Plus/Minus Query 363387 TATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGT 363446 |||||| || | ||||| |||| | ||| ||| ||| ||||||||| | || || Sbjct 782030 TATTTT-GGTTTCAAGACATTGGAAAGATCATACTTATTGAAGATCAATGGTAAGATCGT 781972 Query 363447 TGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGA 363506 |||| | || || ||| || | ||| | |||||| |||||||||| | | |||| Sbjct 781971 TGAAAGACCACAACATTTGATYATGAGAGTTGCTGTTGGTATCCACGGTGAAAACATTGA 781912 Query 363507 TGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTC---ACGCACGCCACGCC 363563 | || ||||| || || ||| | || ||| || | || || || | || Sbjct 781911 AAAAGTCATCGAAACTTACAA-CTTG-ATGT-CTCAAAGATACTTTACCCATGCTTCTCC 781855 Query 363564 AACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTT-CTAAAAA 363622 |||| | | ||||||||| |||| | || || ||||||||||| |||||| | | Sbjct 781854 AACACTATTCAATGCTGGTACTCCAAGACCTCAAATGTCTTCTTG-TTTCTTAATTTCTA 781796 Query 363623 TGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCA 363682 ||||||| ||||| || || ||||||| ||| || | ||| | ||||||| ||||| | Sbjct 781795 TGAAGGATGATTCTATTGACGGTATCTATGATACCTTRAAGGAATGTGCTCAAATTTCTA 781736 Query 363683 AGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCG-TGCACAGAACAGTTACATT 363741 ||| ||| || || |||||| || || ||||| | | | ||| | | ||||||| Sbjct 781735 AGACTGCMGGTGGTATTGGTTTACACATTCACAACATCAGATCCACTG-GCTCTTACATT 781677 Query 363742 CGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 || || || ||| || ||||| || |||| ||| || | || || |||| || Sbjct 781676 GCTGGTACCAATGG-TACTTCCAATGGTTTGATTCCTATGGTTAGAGTTTTCAACAACAC 781618 Query 363801 TGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTC 363858 ||| || || || || || ||||| | |||| | || || |||||| |||| || Sbjct 781617 TGCCAGATATGTTGATCAAGGTGGTAACAAAAGACC--TGGTGCCTTTGCTCTGTACCTA 781560 Query 363859 GAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA-CACGGGAAAAGA 363917 || || || | ||||| ||||| || | || || | ||||| ||| || || || Sbjct 781559 GAACCATGGCACTCTGATATCTTTGATTTCATCGACATCAGAAAAAATCAC-GGTAAGGA 781501 Query 363918 GGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCG 363977 ||| | | || | ||| | ||| || | ||| || ||||| || |||||| | Sbjct 781500 AGAAATCAGAGCTAGAGATTTATTCCCAGCTTTATGGATTCCTGACTTGTTCATGAAGAG 781441 Query 363978 CGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA 364037 || ||||| | ||||| | | || | || ||| ||| ||| | || Sbjct 781440 AGTCAAGGCAAATGGTGATTGGACTTTATTCTCTCCTAGTGAAGCTCCTGGTTTGAGYGA 781381 Query 364038 TGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAA-TCGGAGGGAAAGGCTC 364096 || | ||||| |||| || || || || | || ||| | | ||| | ||| | Sbjct 781380 TGCTTATGGTGATGACTTTGAAAAGCTWTATGACCAATACGAACTAGAAGGTAGAGG-TA 781322 Query 364097 GTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAG 364156 | ||||| || || || ||| |||||| |||||| | || | || | || || | Sbjct 781321 GAAAGACCATCAAGGCTCAAAAGTTATGGTACGCCATCTTAGAAGCCCAAACCGAAACTG 781262 Query 364157 GAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTG 364216 | || || | || | ||||| ||| | || || || || || || || || | | Sbjct 781261 GTACTCCTTTCATTGTTTACAAGGATGCTTGTAATAAAAAATCTAATCAAAAGAACTTGG 781202 Query 364217 GTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGA 364276 |||||||| | ||| ||||| || ||| |||||||| | | | | || | Sbjct 781201 GTACAATTAAATCTTCTAACTTATGTTGTGAAATTGTTGAATACTCAGATGATAAGGAAA 781142 Query 364277 CTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAA 364322 |||| || |||||| | || || | || | || || |||||||| Sbjct 781141 CTGCTGTTTGTAACTTAGCYTCTGTTGCCTTACCAGCCTTTGTAAA 781096 >seq1 Length=1289090 Score = 147 bits (162), Expect = 6e-30 Identities = 481/740 (65%), Gaps = 18/740 (2%) Strand=Plus/Plus Query 22219 GCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTGCATCT 22278 || ||||||||| | | || ||||| || ||| || | || || || | || Sbjct 687819 GCTTTCTTTGCTGCTTCTGATGGTATTGTCAATGAAAACTTGGTTGAAAAYTTCTCTGCT 687878 Query 22279 GAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTT 22338 ||| ||||| ||||| || | |||||||| ||| | ||||| ||||| ||||| || Sbjct 687879 GAAGTTCAAATTCCAGAAGCTAAGTGTTTCTACGGTTTCCAAATTATGATGGAAAACATT 687938 Query 22339 CACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGACGAACAACGA 22398 ||| | ||||| |||||| | | || | || | | | ||| | | ||| || || Sbjct 687939 CACTCTGAAACTTATTCTTTATTATTAGACACATACATCAAGGATCCAAAGGAA-AATGA 687997 Query 22399 AA-CTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCT 22457 |||||| ||| || || |||| ||||||| | ||||| || ||||| | Sbjct 687998 TTTCTTATTAAACGCTATAGAAACTATTCCTGAAATTAAGGAAAAGGCTGAATGGGCTAT 688057 Query 22458 GAAATGGATGAACAATGA--ACG-TTCATTCGCGGAACGTCTTATTGCATTTGCTGTGGT 22514 | |||||| | || | ||| || || || ||| | || |||| ||||||| || Sbjct 688058 TAGATGGATTCAAGATAAGGACGCTTTGTTTGCTGAAAGACTGGTTGCTTTTGCTGCTGT 688117 Query 22515 TGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAAT 22574 |||||| | || || ||||| ||||| ||| ||||| ||| | || ||| | | Sbjct 688118 TGAAGGTGTCTTTTTCTCTGGTTCATTTGCTGCTATCTTCTGGTTGAAGAAAAAGGGTTT 688177 Query 22575 TATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGA 22634 ||||| ||| | || || || || || || || | ||||||| ||| | ||||| || Sbjct 688178 GATGCCTGGTTTGACTTTCTCCAACGAATTGATCTGTAGAGATGAAGGTTTACATACTGA 688237 Query 22635 TTTTGCGTGTATGCTATATCGGAATCATATCATTCATA-AACTT-CCATATGAAACTGTA 22692 ||||| ||| | | | || | || | | | ||| ||| || || | Sbjct 688238 CTTTGCCTGTCTATTGT-------TC-TCYCACTTAAAGAACAAGCCAGATCCAAAGATC 688289 Query 22693 CTTGATA---TTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGAGGCGTTA 22749 |||| | ||||| | | || |||||| ||||| || || || || | Sbjct 688290 ATTGAAAGAATTATTGCTGAAGCTGTTGAAATTGAAAAGAGATACTTTGTTGATGCCATT 688349 Query 22750 CCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTGTTGCA 22809 ||||| | ||||||| ||||| || ||||| |||| || |||||||||| Sbjct 688350 CCAGTTGCATTACTTGGTATGAATGCTGATCTAATGAACCAATATGTTGAATTTGTTGCT 688409 Query 22810 GATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCCATTTGAA 22869 ||| | ||||| || | | ||| | | ||||| | || ||| || ||||| || Sbjct 688410 GATAGATTATTAGTTGCCTTAGGTAACGAAAAGCTGTTCAATGTCACCAACCCATTCGAC 688469 Query 22870 TGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTTGGTGAA 22929 | |||||| || || | | || |||||||||||||| ||||| |||||| ||| Sbjct 688470 TTTATGGAAAACATATCCTTAGCTGGTAAGACCAATTTCTTTGAAAAGAGAGTTTCTGAT 688529 Query 22930 TACCAAAAAGCAGGTGTTAT 22949 || ||||| || |||||||| Sbjct 688530 TATCAAAAGGCTGGTGTTAT 688549 >seq12 Length=1055690 Score = 91.5 bits (100), Expect = 4e-13 Identities = 131/182 (72%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 111362 AGAACTTCTGTGGTTTATTCGCGGAAGTACAAATG-CAAATGAACTTGCAGCAAAAAAT- 111419 ||||||||| |||||| || ||| ||| ||| |||| || | || || || Sbjct 820114 AGAACTTCTTTGGTTTGTTAAGGGAGATACCAATAACAAA--AATCTACAAAAAGAAGGC 820171 Query 111420 GTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGAC 111479 || |||||||||||||| ||||| || ||| | | |||||||| |||| | ||| Sbjct 820172 GTCAAAATTTGGGATGGTAATGGTTCTCGTSAATACCTAGATTCTCTTGGGTTAACTGAC 820231 Query 111480 AACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGAC 111539 | |||||||||||| | || || ||||| || || |||||| | || |||||||| || Sbjct 820232 AGAGAAGAAGGTGATTTAGGTCCTGTTTATGGTTTCCAATGGAGACATTTTGGTGCTGAA 820291 Query 111540 TA 111541 || Sbjct 820292 TA 820293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353299414076