Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq16 132 4e-26
seq18 116 3e-21
seq1 96.9 3e-15
seq15 87.8 2e-12
>seq16
Length=726111
Score = 132 bits (146), Expect = 4e-26
Identities = 170/232 (73%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
|| ||||||| | ||||| ||||| |||||||| || | || || | ||||| || |
Sbjct 202336 CACAATGCAAATCTTTGTTAAAACTTTAACTGGTAAGACCATCACTTTAGAAGTTGAATC 202395
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
| ||| | ||||| |||||| || || || || ||||| || ||||| ||
Sbjct 202396 TAGTGACTCTATCGACGCTGTCAAATCTAAAATCCAAGATAAGGAAGGTATTCCTCCTGA 202455
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATT 24165
|||||| ||| |||||| || ||| || ||| | ||||||| |||| | | | | ||||
Sbjct 202456 TCAACAAAGATTGATTTTCGCCGGTAAACAATTAGAAGATGGTAGAA-CATTATCTGATT 202514
Query 24166 ATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
| ||||||||||||||||| || | ||| |||| |||||||| ||||| ||
Sbjct 202515 ACAACATTCAAAAAGAATCCACTCTCCATCTAGTCTTAAGATTAAGAGGTGG 202566
>seq18
Length=436904
Score = 116 bits (128), Expect = 3e-21
Identities = 167/233 (72%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 23986 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGG 24045
||||||||||| | || |||||||| ||||||| || | ||||| | || |||||
Sbjct 25383 ACAAAATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAAT 25442
Query 24046 CCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCG 24105
| || | ||||| | || || || || ||||||||||| || || || |
Sbjct 25443 CTTCTGATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATTCCACCTG 25502
Query 24106 ATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GAT 24164
||||||| ||| | || | || || |||||| | ||||||| || ||| | | | ||
Sbjct 25503 ATCAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAG-AACTTTATCTGAC 25561
Query 24165 TATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| ||||||||||||||||| || | || ||||| |||||||| ||||| ||
Sbjct 25562 TACAACATTCAAAAAGAATCCACTTTACACTTAGTCTTAAGATTAAGAGGTGG 25614
>seq1
Length=1289090
Score = 96.9 bits (106), Expect = 3e-15
Identities = 129/176 (73%), Gaps = 10/176 (6%)
Strand=Plus/Minus
Query 104879 AATAGAGGCAGGCAAAGTCTGTGTGCAATCCTTCATCTCTAGAAATAAGTTCGTTGCTGT 104938
|||||| ||||||||||| || || || |||||||||||| | || | ||||||| |
Sbjct 688252 AATAGA--CAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGA 688195
Query 104939 AAGTCAAGCCAGGTA-GAGCCCCtttttttGTGTCTTTAATATAGTAGATGGCAGCAAAA 104997
||||||| ||||| | | ||||||| |||| || || |||| ||||||||
Sbjct 688194 AAGTCAAACCAGGCATCAAACCCTTTT------TCTTCAA-CCAGAAGATAGCAGCAAAT 688142
Query 104998 CTACCGGAGAAAAAGACACCTTCGACGATGGCAAACGCGACCATGCGTTCGGCGAA 105053
||| ||||||||||||||||| || ||||| || |||| | ||| || ||
Sbjct 688141 GAACCAGAGAAAAAGACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAA 688086
>seq15
Length=137011
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059
||||| || || ||||| || || | || || | |||||||| | || || ||
Sbjct 39105 TTTGTCAAGACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTGCTGAAACTATT 39046
Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119
|| ||||| ||||| ||||| ||||| || || || |||||||| ||| |
Sbjct 39045 GACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTA 38986
Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179
|| | | || || ||| | ||||| | |||| | | ||||| ||||| ||||||
Sbjct 38985 ATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAACATCCAAAAA 38926
Query 24180 GAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||||| | || ||||| ||||||||||||| ||
Sbjct 38925 GAATCTACTCTACACTTAGTTCTAAGATTGAGAGGTGG 38888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935905682790
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |