Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq16 132 4e-26 seq18 116 3e-21 seq1 96.9 3e-15 seq15 87.8 2e-12 >seq16 Length=726111 Score = 132 bits (146), Expect = 4e-26 Identities = 170/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 || ||||||| | ||||| ||||| |||||||| || | || || | ||||| || | Sbjct 202336 CACAATGCAAATCTTTGTTAAAACTTTAACTGGTAAGACCATCACTTTAGAAGTTGAATC 202395 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 | ||| | ||||| |||||| || || || || ||||| || ||||| || Sbjct 202396 TAGTGACTCTATCGACGCTGTCAAATCTAAAATCCAAGATAAGGAAGGTATTCCTCCTGA 202455 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATT 24165 |||||| ||| |||||| || ||| || ||| | ||||||| |||| | | | | |||| Sbjct 202456 TCAACAAAGATTGATTTTCGCCGGTAAACAATTAGAAGATGGTAGAA-CATTATCTGATT 202514 Query 24166 ATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 | ||||||||||||||||| || | ||| |||| |||||||| ||||| || Sbjct 202515 ACAACATTCAAAAAGAATCCACTCTCCATCTAGTCTTAAGATTAAGAGGTGG 202566 >seq18 Length=436904 Score = 116 bits (128), Expect = 3e-21 Identities = 167/233 (72%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 23986 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGG 24045 ||||||||||| | || |||||||| ||||||| || | ||||| | || ||||| Sbjct 25383 ACAAAATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAAT 25442 Query 24046 CCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCG 24105 | || | ||||| | || || || || ||||||||||| || || || | Sbjct 25443 CTTCTGATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATTCCACCTG 25502 Query 24106 ATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GAT 24164 ||||||| ||| | || | || || |||||| | ||||||| || ||| | | | || Sbjct 25503 ATCAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAG-AACTTTATCTGAC 25561 Query 24165 TATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||||||||||||||| || | || ||||| |||||||| ||||| || Sbjct 25562 TACAACATTCAAAAAGAATCCACTTTACACTTAGTCTTAAGATTAAGAGGTGG 25614 >seq1 Length=1289090 Score = 96.9 bits (106), Expect = 3e-15 Identities = 129/176 (73%), Gaps = 10/176 (6%) Strand=Plus/Minus Query 104879 AATAGAGGCAGGCAAAGTCTGTGTGCAATCCTTCATCTCTAGAAATAAGTTCGTTGCTGT 104938 |||||| ||||||||||| || || || |||||||||||| | || | ||||||| | Sbjct 688252 AATAGA--CAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGA 688195 Query 104939 AAGTCAAGCCAGGTA-GAGCCCCtttttttGTGTCTTTAATATAGTAGATGGCAGCAAAA 104997 ||||||| ||||| | | ||||||| |||| || || |||| |||||||| Sbjct 688194 AAGTCAAACCAGGCATCAAACCCTTTT------TCTTCAA-CCAGAAGATAGCAGCAAAT 688142 Query 104998 CTACCGGAGAAAAAGACACCTTCGACGATGGCAAACGCGACCATGCGTTCGGCGAA 105053 ||| ||||||||||||||||| || ||||| || |||| | ||| || || Sbjct 688141 GAACCAGAGAAAAAGACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAA 688086 >seq15 Length=137011 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059 ||||| || || ||||| || || | || || | |||||||| | || || || Sbjct 39105 TTTGTCAAGACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTGCTGAAACTATT 39046 Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119 || ||||| ||||| ||||| ||||| || || || |||||||| ||| | Sbjct 39045 GACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTA 38986 Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179 || | | || || ||| | ||||| | |||| | | ||||| ||||| |||||| Sbjct 38985 ATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAACATCCAAAAA 38926 Query 24180 GAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||| | || ||||| ||||||||||||| || Sbjct 38925 GAATCTACTCTACACTTAGTTCTAAGATTGAGAGGTGG 38888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935905682790