Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq14 432 5e-116 seq1 203 4e-47 >seq14 Length=1507144 Score = 432 bits (478), Expect = 5e-116 Identities = 1491/2298 (65%), Gaps = 75/2298 (3%) Strand=Plus/Plus Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909 ||||||||||| | || || || | || || | | |||||||| || || || | | Sbjct 780196 GTGAATTGAATAGCGGCTGAGGCAGCTTGTGTTCTCAAGTAGTACATACCAGTCTTCAAA 780255 Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATC-TGCTA 61967 || ||||| ||||| || ||||| |||| || ||| | || | || | Sbjct 780256 CCCTTGCTCCAACCGTAGAAGTGCATGGAAGTTAACTTACCCATAGTTGGGGCCATG--A 780313 Query 61968 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 62027 | || || ||||| || ||| |||||| ||||| ||| || || || ||||| | | Sbjct 780314 TGTGAATGTTCATGGAATGAGATTGATCAATGAAAGCTTGTCTATCAGCGGCCATATCAA 780373 Query 62028 TAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 62086 | || |||||||||| | |||||||| ||||||||| || || ||| || |||| ||| Sbjct 780374 TGATAGTCTTTTGTGATAATTCCCAAACAGTTTTATACAAATC-CTTCATTTCTTGAGGA 780432 Query 62087 AGGTTTGT--ATTCT-GAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCA 62143 | ||||| ||| | | || || ||| | || || || || ||| || | ||| Sbjct 780433 ATGTTTGGCAATTGTTGGATAGAACCATTGTTAGCAATGATATTAGACTTCATGGCTTCA 780492 Query 62144 TTCCATAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTC 62202 | ||| ||| | | || |||| | | | | | || || || | ||| |||| Sbjct 780493 TCCCA-AATACCCATATCAACTAAATCCTTCAATAAGTATGGGTTGACAATTTGGTATTC 780551 Query 62203 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATT 62262 ||||| || ||| | || ||| || ||| || | ||||| | | | ||||| | Sbjct 780552 ACCAGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGGTTCGAAACATTCATTGTA 780611 Query 62263 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAG 62322 || |||||||| | ||| || ||||| |||||||| || |||||||| ||||| | Sbjct 780612 ACCTAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAA 780671 Query 62323 ACCGTATGTTCTGATTTTATCTTTTAGAGGTTC---CCAATTCCAAAGATCCGACGGTAC 62379 ||||| | || ||| | || | ||| ||||| ||| | | || | Sbjct 780672 ACCGTGCTTGGCAATCTTAGCCTTCAA---TTCAGTCCAATCCCATARGGTAGTTGGAGC 780728 Query 62380 AACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATC 62439 ||| ||||| || ||| | | || || ||| | || | | | Sbjct 780729 AACGTTCCAGAAATCGTATTGTAAAACACCTTGAGAAGCTGGAGAACCTTCGTAAGAAGC 780788 Query 62440 GTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGT 62499 || | |||||| | ||||||| |||| || || || ||| ||| ||||||||| Sbjct 780789 ATAGGTTCCTTCAATTTCAGCTAATTCAGTGGAAGCTTCCAAAGCAGCGTGATAAATGGT 780848 Query 62500 TTCGAAGATCTTCTTATTTAGATCTTGCGCTTC--CAGGCTATCAAATGGATAATTTAAG 62557 |||||| || | | || | || | |||| ||| ||| |||||| |||| Sbjct 780849 TTCGAAAATTTGAATGTTCAATTCYTTGGCTTTTTCAGA--ATCGAATGGAACTCTTAAC 780906 Query 62558 AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 62617 | ||||| | || || || ||||||||||| | | |||||||| |||||| | ||| Sbjct 780907 ATCATAAAAGTATCAGCCAAACCTTGAACACCTACGGCAATAGGTCTGTGTCTCATGTTA 780966 Query 62618 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 62677 || || ||| | || ||| ||||| || | || |||| || | | |||| Sbjct 780967 GATCTTCTAGCAGTTTCAACAGGGTAATAGTTTCTGTCAATAACAGCGTTTA-AGTTCTT 781025 Query 62678 A-CAATTACTTTGACCACATCCTTCAGTTTGAGAAAATC--AAATC---GCCC----ATC 62727 | |||| || || || || | ||||| || || || | | | ||| Sbjct 781026 AGCAATAACCTTACAAACTTCGTGAAGTTTTTTGAAGTCGTAAGTTTGAGTCTTTTGATC 781085 Query 62728 TA---------TTACAAACA-TGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCT 62777 | ||||||| || | || |||||||| || | |||||||| || | Sbjct 781086 TTCKGAGACCTTTACAAAGGCTGGT-AAGGCAACAGARGCTAAGTTACAAACAGCAGTTT 781144 Query 62778 CATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 62837 | ||| |||| | |||| | || ||| || | ||| | | || || || || | Sbjct 781145 CCTTATCATCTGAGTATTCAACAATTTCACAACATAAGTTAGAAGATTTAATTGTACCCA 781204 Query 62838 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAG 62897 | || | ||||||| ||||| ||||| |||||||| |||| |||||| |||||||||| Sbjct 781205 AGTTCTTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAAGGAGTACCAG 781264 Query 62898 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGT 62957 |||| | || | ||||| || || | ||| | | ||||||| || | ||| | Sbjct 781265 TTTCGGTTTGGGCTTCTAAGATGGCGTACCATAACTTTTGAGCCTTGATGGTC--TTTCT 781322 Query 62958 ATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATT 63015 | |||| |||| ||||||| | ||| | ||| || || || || || ||| Sbjct 781323 ACCTCTACCTTCTAGTTCGTATTGGTCATAWAGCTTTTCAAAGTCATCACCATAAGCATC 781382 Query 63016 GTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 63075 || |||||| |||| ||| | | || | ||| || || | |||| |||| Sbjct 781383 RCTCAAACCAGGAGCTTCACTAGGAGAGAATAAAGTCCAATCACCATTTGCCTTGACTCT 781442 Query 63076 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTC 63135 ||||| || | ||||||||||| | |||| |||| |||||| | ||| ||| || Sbjct 781443 CTTCATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCTTC 781502 Query 63136 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 63195 || || ||| ||| | | |||| ||| | | |||||||| ||||| ||||| | Sbjct 781503 CTTACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCCATGGTTCTAG 781562 Query 63196 GTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 63255 ||| | || | | ||||| | |||||| || || ||||| | ||||| || ||||| Sbjct 781563 GTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACATATCTGGCAGTGTT 781622 Query 63256 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATA 63315 || ||||||| | ||| ||||| | ||||||||| ||||||||||| || | || || Sbjct 781623 GTTGAAAACTCTAACCATAGGAATCAAACCATTGGAAGTACCATTGGTACCAGCAATGTA 781682 Query 63316 GCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 63375 ||| ||| | || || ||| || ||| || || || || | ||||| || Sbjct 781683 AGAGCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCKGCAGTCTTAGAAAT 781742 Query 63376 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 63435 | || ||| || || ||||||||||| || || ||| ||||||| |||| || Sbjct 781743 TTGAGCACATTCCTTYAAGGTATCATAGATACCGTCAATAGAATCATCCTTCATAGAAAT 781802 Query 63436 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 63495 || ||||| ||||||||| | | ||| || ||||| |||| || |||||||| Sbjct 781803 TAAGAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAAGC 781862 Query 63496 GTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT-ATCCC 63554 || ||||| || ||| ||| | | ||||| || || || || || || | | Sbjct 781863 ATGGGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTTCAATGTTTTC 781922 Query 63555 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 63614 | | || || || || || || | ||| | || || || ||||||||||||||||| Sbjct 781923 ACCG-TGGATACCAACAGCAACTCTCATRATCAAATGTTGTGGTCTTTCAACGATCTTAC 781981 Query 63615 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGA 63672 || || ||||| ||||| ||| ||||||| || || ||||||||||||||||| ||| Sbjct 781982 CATTGATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAGTTGA 782041 Query 63673 AAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAAC-----T 63727 || |||| || | |||||| | | | |||| || | ||| |||| | Sbjct 782042 AA--TCTCTATCRAAGATAATAGTAGCATCTAAGGTATCTTTGTGTTTCATAACGGTTTT 782099 Query 63728 ACATCCATGGTAATACTTGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAG 63787 | | ||| | | ||||| || ||| | |||||| | || || ||| Sbjct 782100 ATAAACATCATCA-----GAAATCATTGGAGACAAAACACCATTTCTTTCGTTAACGTAG 782154 Query 63788 TTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATT--TG 63845 ||| |||| || || || |||| | ||||| |||||| |||| ||||||| || || Sbjct 782155 TTGTATAAGTCTTCGATAACTTGAGAAAATAATTTTTTGGTTTGCTTGTGTAAGTTACTG 782214 Query 63846 ATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCT 63904 || ||| ||||| ||||| |||| |||||||| ||||| || || || || ||| Sbjct 782215 AT--GGCAATTCTGGCGGCAAGAACAGCATAATCAGGATGAACAGTGGT-CATGTAGGCA 782271 Query 63905 GCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATATTCCTTGG 63964 |||| || || | | || ||||| | || || ||||| | || | || | Sbjct 782272 CAAGTTTCAGCGGCTAAGTTATCTAATTCGATGGTAGTAACACCTTCGTAGACACCGGAG 782331 Query 63965 ATAACCTTCAT--AGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATA 64022 |||| ||| | | ||||| | |||||| ||||| | || | ||| ||||| |||| Sbjct 782332 ATAA--TTCTTTGGGTGATTTTGACAGGATCGATATGTTTAGCATCTAATCCATAGCATA 782389 Query 64023 ATTTTCTAATACGAGATGTGATTTTATCAAACATGACATTTTCCTTGT-ATCCATTTCGT 64081 || | ||| | ||||| ||||||||||| ||| | ||| | ||| | || | Sbjct 782390 ATCTAGCAATTCTGGATGTAATTTTATCAAA-TTGAACTGGAACTTTTCTTCCGTCTCTT 782448 Query 64082 TTAATGACAAACATTTTT 64099 |||| |||||||| ||| Sbjct 782449 TTAACAACAAACATGTTT 782466 >seq1 Length=1289090 Score = 203 bits (224), Expect = 4e-47 Identities = 583/887 (66%), Gaps = 18/887 (2%) Strand=Plus/Minus Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429 ||||| || ||| || | ||||| || ||||| || ||||| |||| ||||| ||| Sbjct 688537 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 688478 Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 32489 ||||| || |||||||| ||||| ||||| | | |||| || || || | Sbjct 688477 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTTACCTAAGGCAACTAAT 688418 Query 32490 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 32549 |||||||| || |||||||| | |||| ||||| | ||| |||||| || | | | Sbjct 688417 AATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAAT 688358 Query 32550 TTAACTGGAAGAGCCACAGTAAGAAAT-TCTTGTTCAATAGAGACCGCGTCTGTTATAAT 32608 |||||||| || || || || |||| |||||| || || || | ||||| Sbjct 688357 GCAACTGGAATGGCATCAACAAAGTATCTCTT-TTCAATTTCAACAGCTTCAGCAATAAT 688299 Query 32609 AGATCTTAC--TGTTTCTTCACTC-GGTGGATACAATAAATGTTTAAACATCAAACATGC 32665 |||| | || | || || || | | ||| || |||| | ||| || Sbjct 688298 ---TCTTTCAATGATCTTTGGATCTGGCTTGTTCTTTAAGTGRGAGAACAATAGACAGGC 688242 Query 32666 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 32725 || || |||| ||| || ||||||| || ||||||||||| || || | || || Sbjct 688241 AAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAGG 688182 Query 32726 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 32785 ||| | || || || | ||| || || | |||||||| ||||| || || | || Sbjct 688181 CATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACACC 688122 Query 32786 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCA 32842 ||| || || ||||| |||| ||||| || || | | || | | || || ||||| Sbjct 688121 TTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATCCA 688062 Query 32843 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 32902 | |||||| || ||||| | || | ||| || || |||||||| || || | Sbjct 688061 TCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTTAATAA 688002 Query 32903 ATAGtttttttCATTACTATCTTTAACATATGTATC-AATCA-AAAGACTATACATTTCC 32960 | | ||||| || ||| || | ||||| || ||| | ||||| ||| |||| Sbjct 688001 GAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGA--ATAAGTTTCA 687944 Query 32961 GAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGT 33020 || ||||||||||| || ||||| || |||||||| || |||| || | ||| || Sbjct 687943 GAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTGA 687884 Query 33021 ACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 33080 ||||| | | | || ||| | || |||||||| || || || ||| || ||||| Sbjct 687883 ACTTCAGCAGAGAARTTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAAG 687824 Query 33081 AACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCA 33137 || ||||| || | || ||| || |||| | | | | | ||||||||||| Sbjct 687823 AAAGCCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATCG 687764 Query 33138 TTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 33197 | | ||| ||||| | ||| | |||||| | ||||| || || || || || | ||| Sbjct 687763 TGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCTTA 687704 Query 33198 TACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 33244 || | ||| || || | ||| ||||| || | ||| ||||| Sbjct 687703 TAGGCTTCCCAAATTTCTGGGAATTTGATTGGGAATAAAACGAATCT 687657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631857432800