Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq16 154 1e-32
seq18 143 2e-29
seq15 136 3e-27
>seq16
Length=726111
Score = 154 bits (170), Expect = 1e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055
||||||||||| ||||| || ||||| || ||||| ||||||| | ||||| || ||
Sbjct 202337 ACAATGCAAATCTTTGTTAAAACTTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCT 202396
Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|||| ||||||| | | || |||||| || || ||||| ||||| |||||
Sbjct 202397 AGTGACTCTATCGACGCTGTCAAATCTAAAATCCAAGATAAGGAAGGTATTCCTCCTGAT 202456
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| | | ||||| ||||| |||||||||||||||| | | || | ||||||
Sbjct 202457 CAACAAAGATTGATTTTCGCCGGTAAACAATTAGAAGATGGTAGAACATTATCTGATTAC 202516
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| ||||||||||||||||| || ||| |||| |||| ||||||| ||
Sbjct 202517 AACATTCAAAAAGAATCCACTCTCCATCTAGTCTTAAGATTAAGAGGTGG 202566
>seq18
Length=436904
Score = 143 bits (158), Expect = 2e-29
Identities = 171/230 (74%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| || ||||| ||| | || ||||| |||| || | || || || || ||
Sbjct 25387 AATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCTTC 25446
Query 25058 TGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||| ||||||| || || ||| |||||| ||||||||||| |||||||||||
Sbjct 25447 TGATTCTATCGA--CAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATTCCACCTGAT 25504
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| | | || || || || || ||||||||||||| | | ||| | || |||
Sbjct 25505 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTAC 25564
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| ||||||||||||||||| |||| ||||| |||| ||||||| ||
Sbjct 25565 AACATTCAAAAAGAATCCACTTTACACTTAGTCTTAAGATTAAGAGGTGG 25614
>seq15
Length=137011
Score = 136 bits (150), Expect = 3e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067
||||| ||||| || |||||||| ||||||| | ||||| || || |||| |||||
Sbjct 39105 TTTGTCAAGACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTGCTGAAACTATT 39046
Query 25068 GAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATT 25127
|| | | ||| || ||| ||||| ||||| ||||||||||| ||||| | |
Sbjct 39045 GACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTA 38986
Query 25128 ATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAA 25187
|| ||||| || |||||||||||||| | | | || | |||||||| || ||||||
Sbjct 38985 ATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAACATCCAAAAA 38926
Query 25188 GAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||| || ||||| ||||| ||||| | ||||| ||
Sbjct 38925 GAATCTACTCTACACTTAGTTCTAAGATTGAGAGGTGG 38888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327904938670
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |