Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq1 271 8e-68
>seq1
Length=1289090
Score = 271 bits (300), Expect = 8e-68
Identities = 610/897 (68%), Gaps = 33/897 (4%)
Strand=Plus/Minus
Query 92791 ATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCC 92850
||||||||| ||||| || || |||| | |||||||||||||| ||||| || |
Sbjct 688549 ATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCT 688490
Query 92851 AAAGATATCGAATTCACTA--GT-GATTGGATTCTTGGCGTTATAATACTTTTC---ACC 92904
|| ||||| | ||| || || || ||| || || | || | |||||| |||
Sbjct 688489 AAGGATAT-GTTTTCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTTACC 688431
Query 92905 GAT--CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCA 92962
| ||||| |||||||||||||| |||||||| | || || ||| | ||||
Sbjct 688430 TAAGGCAACT-----AATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCA 688376
Query 92963 CAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAA-TCTTTCTCGATTAC 93021
|||||| || || | || || | || || ||| | ||||| || ||| |
Sbjct 688375 GCATTCATACCAAGTAATGCAACTGGAATGGCATCAACAAAGTATCTCTTT-TCAATTTC 688317
Query 93022 AACGGCTTCTTTCAAGATTTCTATTACTCTACT----ATTTGG-TGGTTTTTGTACGACA 93076
||| ||||| ||| | |||| | | | || || ||| | ||| || || |
Sbjct 688316 AACAGCTTCAG-CAATAATTCTTTCAATGATCTTTGGATCTGGCTTGTTCTT-TAAGTGR 688259
Query 93077 TAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCA 93136
| | ||| || || |||||||| |||||||||||||| |||| | ||||| ||
Sbjct 688258 GA---GAACAATAGACAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCG 688202
Query 93137 TTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAA 93196
||| ||| || ||||| || | || || |||||| | ||| || || | ||||||
Sbjct 688201 TTGGAGAAAGTCAAACCAGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAAT 688142
Query 93197 CTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTT 93256
|||||| ||||| | |||||| || || ||||| || || | | ||| |||||
Sbjct 688141 GAACCAGAGAAAAAGACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAA 688082
Query 93257 GCGGAATTACTGCTGA-TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAG 93315
||| ||| | ||| ||||| | | |||||| || || |||| |||||| ||| |
Sbjct 688081 GCGTCCTTA-TCTTGAATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAAT 688023
Query 93316 TGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGAT 93375
||||| |||||||| |||| | |||| || | | ||| |||||||| || |
Sbjct 688022 AGTTTCTATAGCGTTTAATAAGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAA 687963
Query 93376 TAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACA 93435
||| | |||||| ||||||| || | || ||||| ||||||||| |||||||||||
Sbjct 687962 TAATAAAGAATAAGTTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACA 687903
Query 93436 TCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTAT 93495
||||||| | || || ||||| ||| || | || || | ||||||||||| ||
Sbjct 687902 CTTAGCTTCTGGAATTTGAACTTCAGCAGAGAARTTTTCAACCAAGTTTTCATTGACAAT 687843
Query 93496 ACCATCGGATGCTGCaaaaaaaGCCAATA--TATGCTTTATAAAATGTTTC-TCATCA-T 93551
|||||| || || ||||| |||||||| | || | ||||| |||| | ||| |
Sbjct 687842 ACCATCAGAAGCAGCAAAGAAAGCCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATT 687783
Query 93552 CTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAA 93611
| || | |||| ||||||| || ||| || || | ||||| |||||| | ||||| |
Sbjct 687782 CATTCTG-TTATTCCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGA 687724
Query 93612 ACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATA 93668
| || ||||| ||| | || || ||||| || ||| | ||| ||||| ||||
Sbjct 687723 AAGAAGCTTCGGCTCTCTTATAGGCTTCCCAAATTTCTGGGAATTTGATTGGGAATA 687667
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860674706320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |