Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1 271 8e-68 >seq1 Length=1289090 Score = 271 bits (300), Expect = 8e-68 Identities = 610/897 (68%), Gaps = 33/897 (4%) Strand=Plus/Minus Query 92791 ATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCC 92850 ||||||||| ||||| || || |||| | |||||||||||||| ||||| || | Sbjct 688549 ATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCT 688490 Query 92851 AAAGATATCGAATTCACTA--GT-GATTGGATTCTTGGCGTTATAATACTTTTC---ACC 92904 || ||||| | ||| || || || ||| || || | || | |||||| ||| Sbjct 688489 AAGGATAT-GTTTTCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTTACC 688431 Query 92905 GAT--CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCA 92962 | ||||| |||||||||||||| |||||||| | || || ||| | |||| Sbjct 688430 TAAGGCAACT-----AATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCA 688376 Query 92963 CAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAA-TCTTTCTCGATTAC 93021 |||||| || || | || || | || || ||| | ||||| || ||| | Sbjct 688375 GCATTCATACCAAGTAATGCAACTGGAATGGCATCAACAAAGTATCTCTTT-TCAATTTC 688317 Query 93022 AACGGCTTCTTTCAAGATTTCTATTACTCTACT----ATTTGG-TGGTTTTTGTACGACA 93076 ||| ||||| ||| | |||| | | | || || ||| | ||| || || | Sbjct 688316 AACAGCTTCAG-CAATAATTCTTTCAATGATCTTTGGATCTGGCTTGTTCTT-TAAGTGR 688259 Query 93077 TAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCA 93136 | | ||| || || |||||||| |||||||||||||| |||| | ||||| || Sbjct 688258 GA---GAACAATAGACAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCG 688202 Query 93137 TTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAA 93196 ||| ||| || ||||| || | || || |||||| | ||| || || | |||||| Sbjct 688201 TTGGAGAAAGTCAAACCAGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAAT 688142 Query 93197 CTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTT 93256 |||||| ||||| | |||||| || || ||||| || || | | ||| ||||| Sbjct 688141 GAACCAGAGAAAAAGACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAA 688082 Query 93257 GCGGAATTACTGCTGA-TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAG 93315 ||| ||| | ||| ||||| | | |||||| || || |||| |||||| ||| | Sbjct 688081 GCGTCCTTA-TCTTGAATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAAT 688023 Query 93316 TGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGAT 93375 ||||| |||||||| |||| | |||| || | | ||| |||||||| || | Sbjct 688022 AGTTTCTATAGCGTTTAATAAGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAA 687963 Query 93376 TAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACA 93435 ||| | |||||| ||||||| || | || ||||| ||||||||| ||||||||||| Sbjct 687962 TAATAAAGAATAAGTTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACA 687903 Query 93436 TCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTAT 93495 ||||||| | || || ||||| ||| || | || || | ||||||||||| || Sbjct 687902 CTTAGCTTCTGGAATTTGAACTTCAGCAGAGAARTTTTCAACCAAGTTTTCATTGACAAT 687843 Query 93496 ACCATCGGATGCTGCaaaaaaaGCCAATA--TATGCTTTATAAAATGTTTC-TCATCA-T 93551 |||||| || || ||||| |||||||| | || | ||||| |||| | ||| | Sbjct 687842 ACCATCAGAAGCAGCAAAGAAAGCCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATT 687783 Query 93552 CTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAA 93611 | || | |||| ||||||| || ||| || || | ||||| |||||| | ||||| | Sbjct 687782 CATTCTG-TTATTCCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGA 687724 Query 93612 ACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATA 93668 | || ||||| ||| | || || ||||| || ||| | ||| ||||| |||| Sbjct 687723 AAGAAGCTTCGGCTCTCTTATAGGCTTCCCAAATTTCTGGGAATTTGATTGGGAATA 687667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860674706320