Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq16 165 7e-36
seq15 145 6e-30
seq18 132 4e-26
>seq16
Length=726111
Score = 165 bits (182), Expect = 7e-36
Identities = 190/256 (74%), Gaps = 5/256 (2%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||||||||||||||| ||||| || ||||| | ||||| ||| | |
Sbjct 202340 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCTAGT 202399
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| | | |||| | ||||| ||||| ||||| ||||| |||||||| || ||||||
Sbjct 202400 GACTCTATCGACGCTGTCAAATCTAAAATCCAAGATAAGGAAGGTATTCCTCCTGATCAA 202459
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || || ||||| ||||| ||||| ||| | || | || |||||||||
Sbjct 202460 CAAAGATTGATTTTCGCCGGTAAACAATTAGAAGATGGTAGAACATTATCTGATTACAAC 202519
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTTCCATTTTAA 22458
||||||||||||||||| | ||| |||| || |||| | || |||| ||||
Sbjct 202520 ATTCAAAAAGAATCCACTCTCCATCTAGTCTTAAGATTAAGAGGTGGTT-----CTTTAT 202574
Query 22459 AATTATATTATATACA 22474
|||| || | ||||||
Sbjct 202575 AATTGTAGTKTATACA 202590
>seq15
Length=137011
Score = 145 bits (160), Expect = 6e-30
Identities = 166/223 (74%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
|||||| || || ||||||||||| || ||||| | ||||| ||| | | || || |
Sbjct 39106 TTTTGTCAAGACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTGCTGAAACTAT 39047
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
|||| | |||| || || ||||||||||| ||||||||||| ||||||||| | |
Sbjct 39046 TGACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATT 38987
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| ||||| || ||||| ||||| || | ||| | || ||||||||||| |||||
Sbjct 38986 AATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAACATCCAAAA 38927
Query 22407 AGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449
|||||| || |||| |||||| | ||||| | || ||| ||
Sbjct 38926 AGAATCTACTCTACACTTAGTTCTAAGATTGAGAGGTGGTGTT 38884
>seq18
Length=436904
Score = 132 bits (146), Expect = 4e-26
Identities = 162/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||||||||| || |||||| |||| ||||| || | ||| | || || ||| |
Sbjct 25385 AAAATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCT 25444
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| ||| | | ||| || | || ||||| |||||||| || ||||||||||| |||
Sbjct 25445 TCTGATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATTCCACCTGAT 25504
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|||||| | | || || || || || || ||||| ||| | || | || || |||
Sbjct 25505 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTAC 25564
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
|||||||||||||||||||| |||| ||||| || ||||
Sbjct 25565 AACATTCAAAAAGAATCCACTTTACACTTAGTCTTAAGATT 25605
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727907922170
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |