Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq15 181 2e-40 seq18 156 8e-33 seq16 152 9e-32 >seq15 Length=137011 Score = 181 bits (200), Expect = 2e-40 Identities = 160/200 (80%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 || |||||||| || || |||||||||||||| ||||| || | || || || |||||| Sbjct 38906 ACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAGATAAGGTTCTACCGTCTTCT 38965 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 || || || || || || || | ||||||||| || |||||||| |||||||||||||| Sbjct 38966 AATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGG 39025 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| |||||||| || || || || || || ||||| |||||||| |||||||| || Sbjct 39026 ATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATTCGACTTCCAAAGTGATGGTCTTA 39085 Query 68433 CCCGTGAGGGTCTTGACGAA 68452 || || | ||||||||| || Sbjct 39086 CCGGTTAAGGTCTTGACAAA 39105 >seq18 Length=436904 Score = 156 bits (172), Expect = 8e-33 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || || ||||||| ||||| |||||||| ||||| || || || | || || |||||| Sbjct 25599 AAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGATAAAGTTCTACCATCT 25540 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 ||||| ||||| || ||||| || | ||||||||| || |||||||| ||||| |||||| Sbjct 25539 TCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTGTCT 25480 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 || || || ||||| || ||||| | || | ||||| || ||||| || ||||| Sbjct 25479 TGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGACCTCCAAAGTAATGGTC 25420 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || || || || || || ||||| || |||||| || Sbjct 25419 TTACCAGTTAGAGTTTTTACGAAAATTTGCATTTTG 25384 >seq16 Length=726111 Score = 152 bits (168), Expect = 9e-32 Identities = 158/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318 || || ||||| |||||||| ||||| ||||| || | ||| || ||||||||||| || Sbjct 202542 TGGAGAGTGGATTCTTTTTGAATGTTGTAATCAGATAATGTTCTACCATCTTCTAATTGT 202483 Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 || |||||||| || | ||||||||| || || ||||| |||||||| ||||| || || Sbjct 202482 TTACCGGCGAAAATCAATCTTTGTTGATCAGGAGGAATACCTTCCTTATCTTGGATTTTA 202423 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438 | ||||| || ||||| | ||| ||||| ||||| || |||||||| || || || Sbjct 202422 GATTTGACAGCGTCGATAGAGTCACTAGATTCAACTTCTAAAGTGATGGTCTTACCAGTT 202363 Query 68439 AGGGTCTTGACGAATATCTGCATTATG 68465 | || || || || || |||||| || Sbjct 202362 AAAGTTTTAACAAAGATTTGCATTGTG 202336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622192634960