Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq15 181 2e-40
seq18 156 8e-33
seq16 152 9e-32
>seq15
Length=137011
Score = 181 bits (200), Expect = 2e-40
Identities = 160/200 (80%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|| |||||||| || || |||||||||||||| ||||| || | || || || ||||||
Sbjct 38906 ACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAGATAAGGTTCTACCGTCTTCT 38965
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
|| || || || || || || | ||||||||| || |||||||| ||||||||||||||
Sbjct 38966 AATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGG 39025
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| |||||||| || || || || || || ||||| |||||||| |||||||| ||
Sbjct 39026 ATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATTCGACTTCCAAAGTGATGGTCTTA 39085
Query 68433 CCCGTGAGGGTCTTGACGAA 68452
|| || | ||||||||| ||
Sbjct 39086 CCGGTTAAGGTCTTGACAAA 39105
>seq18
Length=436904
Score = 156 bits (172), Expect = 8e-33
Identities = 164/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309
|| || ||||||| ||||| |||||||| ||||| || || || | || || ||||||
Sbjct 25599 AAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGATAAAGTTCTACCATCT 25540
Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369
||||| ||||| || ||||| || | ||||||||| || |||||||| ||||| ||||||
Sbjct 25539 TCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTGTCT 25480
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
|| || || ||||| || ||||| | || | ||||| || ||||| || |||||
Sbjct 25479 TGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGACCTCCAAAGTAATGGTC 25420
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
|| || || || || || ||||| || |||||| ||
Sbjct 25419 TTACCAGTTAGAGTTTTTACGAAAATTTGCATTTTG 25384
>seq16
Length=726111
Score = 152 bits (168), Expect = 9e-32
Identities = 158/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318
|| || ||||| |||||||| ||||| ||||| || | ||| || ||||||||||| ||
Sbjct 202542 TGGAGAGTGGATTCTTTTTGAATGTTGTAATCAGATAATGTTCTACCATCTTCTAATTGT 202483
Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378
|| |||||||| || | ||||||||| || || ||||| |||||||| ||||| || ||
Sbjct 202482 TTACCGGCGAAAATCAATCTTTGTTGATCAGGAGGAATACCTTCCTTATCTTGGATTTTA 202423
Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438
| ||||| || ||||| | ||| ||||| ||||| || |||||||| || || ||
Sbjct 202422 GATTTGACAGCGTCGATAGAGTCACTAGATTCAACTTCTAAAGTGATGGTCTTACCAGTT 202363
Query 68439 AGGGTCTTGACGAATATCTGCATTATG 68465
| || || || || || |||||| ||
Sbjct 202362 AAAGTTTTAACAAAGATTTGCATTGTG 202336
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622192634960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |