Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq18 113 4e-20 seq16 89.7 4e-13 seq15 87.8 2e-12 >seq18 Length=436904 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| || | || ||| || ||||| |||| || |||||||||||||||||||| || Sbjct 25615 ACCACCTCTTAATCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 25556 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | ||| | | |||||| | ||| ||||||||| |||| | | ||||| || || || Sbjct 25555 TAAAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGG 25496 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTCGA 114333 ||| ||||||||||| || ||| | ||| | | || | | || | ||||||| Sbjct 25495 AATACCTTCTTTGTCTTGGAT-TTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGA 25437 Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | |||| || | || || || || ||||||||||| ||||| ||||| Sbjct 25436 CCTCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCAT 25388 >seq16 Length=726111 Score = 89.7 bits (98), Expect = 4e-13 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC-GC 114213 ||| || | || ||| || |||| ||| | || ||||||||||||||||||||||| | Sbjct 202567 ACCACCTCTTAATCTTAAGACTAGATGGAGAGTGGATTCTTTTTGAATGTTGTAATCAGA 202508 Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273 | || || | | |||||| | ||||||||| ||| | || | | ||||| || |||| Sbjct 202507 TAAT-GTTCTACCATCTTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCAGGAG 202449 Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTG-TTCAACGGTGTCGGTGGATTCG 114332 |||| ||||| || || || ||| | ||| | | || | | ||| | ||||| Sbjct 202448 GAATACCTTCCTTATCTTGGAT-TTTAGATTTGACAGCGTCGATAGAGTCACTAGATTCA 202390 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || || || | |||||| ||||| || ||||| Sbjct 202389 ACTTCTAAAGTGATGGTCTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 202340 >seq15 Length=137011 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 114167 TCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGA 114226 ||| | |||||| |||| |||||||||||||| ||||||||||| | || | | Sbjct 38899 TCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAGATAAGGTTCTACC 38958 Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 ||||| | |||||||||||| |||| | | ||||| || || ||||| ||||| || Sbjct 38959 GTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTT 39018 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 ||| ||||| || | |||| || || | |||||||| |||| || | Sbjct 39019 GTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATTCGACTTCCAAAGTGAT 39078 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAA 114374 || || ||||| | || || |||||| Sbjct 39079 GGTCTTACCGGTTAAGGTCTTGACAAAA 39106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134307833016