Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 3e-13 >seq1 Length=1289090 Score = 91.5 bits (100), Expect = 3e-13 Identities = 171/249 (69%), Gaps = 5/249 (2%) Strand=Plus/Plus Query 42639 ATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGAT-CGAGAGTCCCGACGCAACGTTCGG 42697 || ||| | ||||| || ||||| | | ||||| | ||| | ||||| ||| | Sbjct 688032 ATTAAGGAAAAGGCTGAATGGGCTATTAGATGGATTCAAGA-TAAGGACGCTTTGTTTGC 688090 Query 42698 CGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTC 42757 || || ||||| || ||| | || || || || |||| ||||| || | || || | Sbjct 688091 TGAAAGACTGGTTGCTTTTGCTGCTGTTGAAGGTGTCTTTTTCTCTGGTTCATTTGCTGC 688150 Query 42758 CATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCAT 42817 ||||||||| | ||| | |||| | |||||| || | || ||||| |||||| | || Sbjct 688151 TATCTTCTGGTTGAAGAAAAAGGGTTTGATGCCTGGTTTGACTTTCTCCAACGAATTGAT 688210 Query 42818 CAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAG 42877 | | || || || || | |||| ||||||||||| || ||||||| ||| | | Sbjct 688211 CTGTAGAGATGAAGGTTTACATACTGACTTTGCCTGTCTATTGTTCTC---YCACTTAAA 688267 Query 42878 GCACAAGCC 42886 | ||||||| Sbjct 688268 GAACAAGCC 688276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338987523680