Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq1 91.5 3e-13
>seq1
Length=1289090
Score = 91.5 bits (100), Expect = 3e-13
Identities = 171/249 (69%), Gaps = 5/249 (2%)
Strand=Plus/Plus
Query 42639 ATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGAT-CGAGAGTCCCGACGCAACGTTCGG 42697
|| ||| | ||||| || ||||| | | ||||| | ||| | ||||| ||| |
Sbjct 688032 ATTAAGGAAAAGGCTGAATGGGCTATTAGATGGATTCAAGA-TAAGGACGCTTTGTTTGC 688090
Query 42698 CGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTC 42757
|| || ||||| || ||| | || || || || |||| ||||| || | || || |
Sbjct 688091 TGAAAGACTGGTTGCTTTTGCTGCTGTTGAAGGTGTCTTTTTCTCTGGTTCATTTGCTGC 688150
Query 42758 CATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCAT 42817
||||||||| | ||| | |||| | |||||| || | || ||||| |||||| | ||
Sbjct 688151 TATCTTCTGGTTGAAGAAAAAGGGTTTGATGCCTGGTTTGACTTTCTCCAACGAATTGAT 688210
Query 42818 CAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAG 42877
| | || || || || | |||| ||||||||||| || ||||||| ||| | |
Sbjct 688211 CTGTAGAGATGAAGGTTTACATACTGACTTTGCCTGTCTATTGTTCTC---YCACTTAAA 688267
Query 42878 GCACAAGCC 42886
| |||||||
Sbjct 688268 GAACAAGCC 688276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944338987523680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |