Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq18 116 9e-21
seq16 111 4e-19
seq15 91.5 3e-13
seq1 84.2 5e-11
>seq18
Length=436904
Score = 116 bits (128), Expect = 9e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||||||||| || || ||||| | | || | || ||||||||||| || || |||||
Sbjct 25579 TTCTTTTTGAATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTGCTTACCAGCGAA 25520
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||| | | |||||| | ||| || |||||||| || |||||||| || || || ||
Sbjct 25519 GATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGGATTTTAGCCTTAACATT 25460
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| |||||||| ||||| || || | || || ||||| || || ||||| || ||
Sbjct 25459 GTCGATAGAATCAGAAGATTCGACCTCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTAC 25400
Query 288462 GAATATCTGCATTATGT 288478
||| || |||||| |||
Sbjct 25399 GAAAATTTGCATTTTGT 25383
>seq16
Length=726111
Score = 111 bits (122), Expect = 4e-19
Identities = 156/218 (72%), Gaps = 1/218 (0%)
Strand=Plus/Minus
Query 288260 TAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGT 288319
|||| || ||||| | ||| ||||||||| || || || || | | || | || |
Sbjct 202552 TAAG-ACTAGATGGAGAGTGGATTCTTTTTGAATGTTGTAATCAGATAATGTTCTACCAT 202494
Query 288320 CTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTAT 288379
||||||||||||| || ||||| |||| | |||||| | || || ||||| ||||
Sbjct 202493 CTTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCAGGAGGAATACCTTCCTTAT 202434
Query 288380 CCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCG 288439
| |||||||| | ||| || || ||||| || || ||||| ||||| | ||||| |
Sbjct 202433 CTTGGATTTTAGATTTGACAGCGTCGATAGAGTCACTAGATTCAACTTCTAAAGTGATGG 202374
Query 288440 TCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477
|||| || || | ||| || || || || |||||| ||
Sbjct 202373 TCTTACCAGTTAAAGTTTTAACAAAGATTTGCATTGTG 202336
>seq15
Length=137011
Score = 91.5 bits (100), Expect = 3e-13
Identities = 130/183 (71%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
|||||||||||| || || || | | || | ||||||||||||||||| || || ||
Sbjct 38923 TTCTTTTTGGATGTTGTAATCAGATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAA 38982
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||| | | |||||| | ||| || ||||| || || ||||| || || || ||
Sbjct 38983 GATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGC 39042
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| |||| || ||||| ||||| | ||||| ||||| ||||| | ||||||||
Sbjct 39043 GTCAATAGTTTCAGCAGATTCGACTTCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGAC 39102
Query 288462 GAA 288464
||
Sbjct 39103 AAA 39105
>seq1
Length=1289090
Score = 84.2 bits (92), Expect = 5e-11
Identities = 157/227 (69%), Gaps = 3/227 (1%)
Strand=Plus/Plus
Query 269115 AAAAGAGTTCATTTGT-GACGCTATCCCATGTTCTATGA-TCGGTATGAATGCCGATCTC 269172
||||||| | ||||| || || || ||| ||| || | | ||||||||||| |||||
Sbjct 688324 AAAAGAGATACTTTGTTGATGCCATTCCA-GTTGCATTACTTGGTATGAATGCTGATCTA 688382
Query 269173 ATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAA 269232
||||| |||||| | ||||| || |||||| | | || || | ||| | || ||
Sbjct 688383 ATGAACCAATATGTTGAATTTGTTGCTGATAGATTATTAGTTGCCTTAGGTAACGAAAAG 688442
Query 269233 GTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACG 269292
||| |||| | || || |||| |||||||||| || || | | || |||||
Sbjct 688443 CTGTTCAATGTCACCAACCCATTCGACTTTATGGAAAACATATCCTTAGCTGGTAAGACC 688502
Query 269293 AACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTAAT 269339
|| ||||| |||||| | || || |||||| ||||||| ||
Sbjct 688503 AATTTCTTTGAAAAGAGAGTTTCTGATTATCAAAAGGCTGGTGTTAT 688549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179654127942204
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |