Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq18 116 9e-21 seq16 111 4e-19 seq15 91.5 3e-13 seq1 84.2 5e-11 >seq18 Length=436904 Score = 116 bits (128), Expect = 9e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| || || ||||| | | || | || ||||||||||| || || ||||| Sbjct 25579 TTCTTTTTGAATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTGCTTACCAGCGAA 25520 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| | | |||||| | ||| || |||||||| || |||||||| || || || || Sbjct 25519 GATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGGATTTTAGCCTTAACATT 25460 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||||||| ||||| || || | || || ||||| || || ||||| || || Sbjct 25459 GTCGATAGAATCAGAAGATTCGACCTCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTAC 25400 Query 288462 GAATATCTGCATTATGT 288478 ||| || |||||| ||| Sbjct 25399 GAAAATTTGCATTTTGT 25383 >seq16 Length=726111 Score = 111 bits (122), Expect = 4e-19 Identities = 156/218 (72%), Gaps = 1/218 (0%) Strand=Plus/Minus Query 288260 TAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGT 288319 |||| || ||||| | ||| ||||||||| || || || || | | || | || | Sbjct 202552 TAAG-ACTAGATGGAGAGTGGATTCTTTTTGAATGTTGTAATCAGATAATGTTCTACCAT 202494 Query 288320 CTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTAT 288379 ||||||||||||| || ||||| |||| | |||||| | || || ||||| |||| Sbjct 202493 CTTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCAGGAGGAATACCTTCCTTAT 202434 Query 288380 CCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCG 288439 | |||||||| | ||| || || ||||| || || ||||| ||||| | ||||| | Sbjct 202433 CTTGGATTTTAGATTTGACAGCGTCGATAGAGTCACTAGATTCAACTTCTAAAGTGATGG 202374 Query 288440 TCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 |||| || || | ||| || || || || |||||| || Sbjct 202373 TCTTACCAGTTAAAGTTTTAACAAAGATTTGCATTGTG 202336 >seq15 Length=137011 Score = 91.5 bits (100), Expect = 3e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||||||||| || || || | | || | ||||||||||||||||| || || || Sbjct 38923 TTCTTTTTGGATGTTGTAATCAGATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAA 38982 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| | | |||||| | ||| || ||||| || || ||||| || || || || Sbjct 38983 GATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGC 39042 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || ||||| ||||| | ||||| ||||| ||||| | |||||||| Sbjct 39043 GTCAATAGTTTCAGCAGATTCGACTTCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGAC 39102 Query 288462 GAA 288464 || Sbjct 39103 AAA 39105 >seq1 Length=1289090 Score = 84.2 bits (92), Expect = 5e-11 Identities = 157/227 (69%), Gaps = 3/227 (1%) Strand=Plus/Plus Query 269115 AAAAGAGTTCATTTGT-GACGCTATCCCATGTTCTATGA-TCGGTATGAATGCCGATCTC 269172 ||||||| | ||||| || || || ||| ||| || | | ||||||||||| ||||| Sbjct 688324 AAAAGAGATACTTTGTTGATGCCATTCCA-GTTGCATTACTTGGTATGAATGCTGATCTA 688382 Query 269173 ATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAA 269232 ||||| |||||| | ||||| || |||||| | | || || | ||| | || || Sbjct 688383 ATGAACCAATATGTTGAATTTGTTGCTGATAGATTATTAGTTGCCTTAGGTAACGAAAAG 688442 Query 269233 GTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACG 269292 ||| |||| | || || |||| |||||||||| || || | | || ||||| Sbjct 688443 CTGTTCAATGTCACCAACCCATTCGACTTTATGGAAAACATATCCTTAGCTGGTAAGACC 688502 Query 269293 AACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTAAT 269339 || ||||| |||||| | || || |||||| ||||||| || Sbjct 688503 AATTTCTTTGAAAAGAGAGTTTCTGATTATCAAAAGGCTGGTGTTAT 688549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654127942204